data_4W6U # _model_server_result.job_id -LiKuKdLg9LjqvDlGPkKJQ _model_server_result.datetime_utc '2024-11-14 23:02:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 4W6U # _exptl.entry_id 4W6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4W6U _cell.length_a 47.64 _cell.length_b 116.58 _cell.length_c 165.98 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,J 1 1 B,H,K 2 1 C,I,L 3 1 D,M 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 65 A LEU 64 1_555 A N1 CRO 66 A CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale2 A C3 CRO 66 A CRO 66 1_555 A N VAL 67 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale3 B C LEU 65 B LEU 64 1_555 B N1 CRO 66 B CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 B C3 CRO 66 B CRO 66 1_555 B N VAL 67 B VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 C C LEU 65 C LEU 64 1_555 C N1 CRO 66 C CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale6 C C3 CRO 66 C CRO 66 1_555 C N VAL 67 C VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale7 D C LEU 65 D LEU 64 1_555 D N1 CRO 66 D CRO 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale8 D C3 CRO 66 D CRO 66 1_555 D N VAL 67 D VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.303 ? metalc ? metalc1 A NE2 HIS 26 A HIS 25 1_555 E NI NI . A NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 A NE2 HIS 117 A HIS 118 1_555 H NI NI . B NI 301 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc3 E NI NI . A NI 301 1_555 J O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc4 E NI NI . A NI 301 1_555 J O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc5 J O HOH . A HOH 408 3_555 H NI NI . B NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc6 H NI NI . B NI 301 1_555 K O HOH . B HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 4W6U _atom_sites.fract_transf_matrix[1][1] 0.020991 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NI A 1 301 301 NI NI . F 3 EDO A 1 302 302 EDO EDO . G 3 EDO A 1 303 303 EDO EDO . H 2 NI B 1 301 301 NI NI . I 4 CIT C 1 301 301 CIT CIT . J 5 HOH A 1 401 401 HOH HOH . J 5 HOH A 2 402 402 HOH HOH . J 5 HOH A 3 403 403 HOH HOH . J 5 HOH A 4 404 404 HOH HOH . J 5 HOH A 5 405 405 HOH HOH . J 5 HOH A 6 406 406 HOH HOH . J 5 HOH A 7 407 407 HOH HOH . J 5 HOH A 8 408 408 HOH HOH . J 5 HOH A 9 409 409 HOH HOH . J 5 HOH A 10 410 410 HOH HOH . J 5 HOH A 11 411 411 HOH HOH . J 5 HOH A 12 412 412 HOH HOH . J 5 HOH A 13 413 413 HOH HOH . J 5 HOH A 14 414 414 HOH HOH . J 5 HOH A 15 415 415 HOH HOH . J 5 HOH A 16 416 416 HOH HOH . J 5 HOH A 17 417 417 HOH HOH . J 5 HOH A 18 418 418 HOH HOH . J 5 HOH A 19 419 419 HOH HOH . J 5 HOH A 20 420 420 HOH HOH . J 5 HOH A 21 421 421 HOH HOH . J 5 HOH A 22 422 422 HOH HOH . J 5 HOH A 23 423 423 HOH HOH . J 5 HOH A 24 424 424 HOH HOH . J 5 HOH A 25 425 425 HOH HOH . J 5 HOH A 26 426 426 HOH HOH . J 5 HOH A 27 427 427 HOH HOH . J 5 HOH A 28 428 428 HOH HOH . J 5 HOH A 29 429 429 HOH HOH . J 5 HOH A 30 430 430 HOH HOH . K 5 HOH B 1 401 401 HOH HOH . K 5 HOH B 2 402 402 HOH HOH . K 5 HOH B 3 403 403 HOH HOH . K 5 HOH B 4 404 404 HOH HOH . K 5 HOH B 5 405 405 HOH HOH . K 5 HOH B 6 406 406 HOH HOH . K 5 HOH B 7 407 407 HOH HOH . K 5 HOH B 8 408 408 HOH HOH . K 5 HOH B 9 409 409 HOH HOH . K 5 HOH B 10 410 410 HOH HOH . K 5 HOH B 11 411 411 HOH HOH . K 5 HOH B 12 412 412 HOH HOH . K 5 HOH B 13 413 413 HOH HOH . K 5 HOH B 14 414 414 HOH HOH . K 5 HOH B 15 415 409 HOH HOH . K 5 HOH B 16 416 415 HOH HOH . K 5 HOH B 17 417 416 HOH HOH . K 5 HOH B 18 418 417 HOH HOH . K 5 HOH B 19 419 418 HOH HOH . K 5 HOH B 20 420 419 HOH HOH . K 5 HOH B 21 421 420 HOH HOH . K 5 HOH B 22 422 421 HOH HOH . K 5 HOH B 23 423 422 HOH HOH . K 5 HOH B 24 424 423 HOH HOH . K 5 HOH B 25 425 424 HOH HOH . K 5 HOH B 26 426 425 HOH HOH . K 5 HOH B 27 427 426 HOH HOH . K 5 HOH B 28 428 427 HOH HOH . K 5 HOH B 29 429 428 HOH HOH . K 5 HOH B 30 430 429 HOH HOH . K 5 HOH B 31 431 430 HOH HOH . K 5 HOH B 32 432 431 HOH HOH . K 5 HOH B 33 433 432 HOH HOH . K 5 HOH B 34 434 433 HOH HOH . K 5 HOH B 35 435 435 HOH HOH . K 5 HOH B 36 436 436 HOH HOH . K 5 HOH B 37 437 437 HOH HOH . K 5 HOH B 38 438 438 HOH HOH . K 5 HOH B 39 439 439 HOH HOH . K 5 HOH B 40 440 440 HOH HOH . K 5 HOH B 41 441 441 HOH HOH . K 5 HOH B 42 442 442 HOH HOH . K 5 HOH B 43 443 443 HOH HOH . K 5 HOH B 44 444 444 HOH HOH . K 5 HOH B 45 445 445 HOH HOH . L 5 HOH C 1 401 402 HOH HOH . L 5 HOH C 2 402 403 HOH HOH . L 5 HOH C 3 403 404 HOH HOH . L 5 HOH C 4 404 405 HOH HOH . L 5 HOH C 5 405 406 HOH HOH . L 5 HOH C 6 406 407 HOH HOH . L 5 HOH C 7 407 410 HOH HOH . L 5 HOH C 8 408 411 HOH HOH . L 5 HOH C 9 409 412 HOH HOH . L 5 HOH C 10 410 413 HOH HOH . L 5 HOH C 11 411 414 HOH HOH . L 5 HOH C 12 412 415 HOH HOH . L 5 HOH C 13 413 416 HOH HOH . L 5 HOH C 14 414 417 HOH HOH . L 5 HOH C 15 415 418 HOH HOH . L 5 HOH C 16 416 420 HOH HOH . L 5 HOH C 17 417 421 HOH HOH . L 5 HOH C 18 418 422 HOH HOH . L 5 HOH C 19 419 423 HOH HOH . L 5 HOH C 20 420 424 HOH HOH . L 5 HOH C 21 421 425 HOH HOH . L 5 HOH C 22 422 427 HOH HOH . L 5 HOH C 23 423 428 HOH HOH . L 5 HOH C 24 424 429 HOH HOH . L 5 HOH C 25 425 430 HOH HOH . L 5 HOH C 26 426 431 HOH HOH . M 5 HOH D 1 301 301 HOH HOH . M 5 HOH D 2 302 302 HOH HOH . M 5 HOH D 3 303 303 HOH HOH . M 5 HOH D 4 304 304 HOH HOH . M 5 HOH D 5 305 305 HOH HOH . M 5 HOH D 6 306 306 HOH HOH . M 5 HOH D 7 307 307 HOH HOH . M 5 HOH D 8 308 308 HOH HOH . M 5 HOH D 9 309 309 HOH HOH . M 5 HOH D 10 310 310 HOH HOH . M 5 HOH D 11 311 311 HOH HOH . M 5 HOH D 12 312 312 HOH HOH . M 5 HOH D 13 313 313 HOH HOH . M 5 HOH D 14 314 314 HOH HOH . M 5 HOH D 15 315 315 HOH HOH . M 5 HOH D 16 316 316 HOH HOH . M 5 HOH D 17 317 317 HOH HOH . M 5 HOH D 18 318 318 HOH HOH . M 5 HOH D 19 319 319 HOH HOH . M 5 HOH D 20 320 320 HOH HOH . M 5 HOH D 21 321 321 HOH HOH . M 5 HOH D 22 322 322 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . I 4 6.466 19.64 -17.62 1 57.63 ? C1 CIT 301 C 1 HETATM 2 O O1 CIT . . . I 4 6.48 19.542 -18.854 1 63.83 ? O1 CIT 301 C 1 HETATM 3 O O2 CIT . . . I 4 7.354 20.225 -16.971 1 53.26 ? O2 CIT 301 C 1 HETATM 4 C C2 CIT . . . I 4 5.278 18.998 -16.951 1 47.34 ? C2 CIT 301 C 1 HETATM 5 C C3 CIT . . . I 4 5.531 17.631 -16.424 1 39.41 ? C3 CIT 301 C 1 HETATM 6 O O7 CIT . . . I 4 6.836 17.27 -16.386 1 49.47 ? O7 CIT 301 C 1 HETATM 7 C C4 CIT . . . I 4 4.95 17.495 -15.06 1 47.15 ? C4 CIT 301 C 1 HETATM 8 C C5 CIT . . . I 4 5.894 17.602 -13.884 1 57.82 ? C5 CIT 301 C 1 HETATM 9 O O3 CIT . . . I 4 6.465 16.562 -13.553 1 57.78 ? O3 CIT 301 C 1 HETATM 10 O O4 CIT . . . I 4 6.1 18.693 -13.314 1 61.71 ? O4 CIT 301 C 1 HETATM 11 C C6 CIT . . . I 4 5.137 16.658 -17.385 1 46.4 ? C6 CIT 301 C 1 HETATM 12 O O5 CIT . . . I 4 5.902 16.358 -18.321 1 43.24 ? O5 CIT 301 C 1 HETATM 13 O O6 CIT . . . I 4 4.046 16.137 -17.215 1 52.86 ? O6 CIT 301 C 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #