data_4W6Z # _model_server_result.job_id v77DKjV1q-tMd4kwOmBvtA _model_server_result.datetime_utc '2024-11-15 01:49:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 4W6Z # _exptl.entry_id 4W6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4W6Z _cell.length_a 144.338 _cell.length_b 144.338 _cell.length_c 128.204 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,S,T 1 1 A,B,E,F,G,H,I,J,K,S,T 1 2 C,D,L,M,N,O,P,Q,R,U,V 2 1 C,D,L,M,N,O,P,Q,R,U,V 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 128.204 3 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N ? 2 L N N ? 2 M N N ? 2 P N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 277 A CYS 277 1_555 B SG CYS 277 B CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 C SG CYS 277 C CYS 277 1_555 D SG CYS 277 D CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc1 A SG CYS 43 A CYS 43 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 A NE2 HIS 66 A HIS 66 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc3 A SG CYS 97 A CYS 97 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc4 A SG CYS 100 A CYS 100 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc5 A SG CYS 103 A CYS 103 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc6 A SG CYS 111 A CYS 111 1_555 F ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc7 A SG CYS 153 A CYS 153 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc8 E ZN ZN . A ZN 401 1_555 H O ETF . A ETF 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.778 ? metalc ? metalc9 B SG CYS 43 B CYS 43 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc10 B NE2 HIS 66 B HIS 66 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc11 B OE2 GLU 67 B GLU 67 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc12 B SG CYS 97 B CYS 97 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc13 B SG CYS 100 B CYS 100 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc14 B SG CYS 103 B CYS 103 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc15 B SG CYS 111 B CYS 111 1_555 J ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc16 B SG CYS 153 B CYS 153 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc17 C SG CYS 43 C CYS 43 1_555 L ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc18 C NE2 HIS 66 C HIS 66 1_555 L ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc19 C SG CYS 97 C CYS 97 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc20 C SG CYS 100 C CYS 100 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc21 C SG CYS 103 C CYS 103 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc22 C SG CYS 111 C CYS 111 1_555 M ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc23 C SG CYS 153 C CYS 153 1_555 L ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc24 L ZN ZN . C ZN 401 1_555 O O ETF . C ETF 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.875 ? metalc ? metalc25 D SG CYS 43 D CYS 43 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc26 D NE2 HIS 66 D HIS 66 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc27 D OE2 GLU 67 D GLU 67 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc28 D SG CYS 97 D CYS 97 1_555 Q ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc29 D SG CYS 100 D CYS 100 1_555 Q ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc30 D SG CYS 103 D CYS 103 1_555 Q ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc31 D SG CYS 111 D CYS 111 1_555 Q ZN ZN . D ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc32 D SG CYS 153 D CYS 153 1_555 P ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4W6Z _atom_sites.fract_transf_matrix[1][1] 0.006928 _atom_sites.fract_transf_matrix[1][2] 0.004 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0078 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 401 348 ZN ZN . F 2 ZN A 1 402 349 ZN ZN . G 3 8ID A 1 403 350 8ID 8ID . H 4 ETF A 1 404 351 ETF ETF . I 2 ZN B 1 401 348 ZN ZN . J 2 ZN B 1 402 349 ZN ZN . K 4 ETF B 1 404 351 ETF ETF . L 2 ZN C 1 401 348 ZN ZN . M 2 ZN C 1 402 349 ZN ZN . N 3 8ID C 1 403 350 8ID 8ID . O 4 ETF C 1 404 351 ETF ETF . P 2 ZN D 1 401 348 ZN ZN . Q 2 ZN D 1 402 349 ZN ZN . R 4 ETF D 1 404 351 ETF ETF . S 5 HOH A 1 501 417 HOH HOH . S 5 HOH A 2 502 425 HOH HOH . S 5 HOH A 3 503 421 HOH HOH . S 5 HOH A 4 504 412 HOH HOH . S 5 HOH A 5 505 433 HOH HOH . S 5 HOH A 6 506 409 HOH HOH . S 5 HOH A 7 507 434 HOH HOH . S 5 HOH A 8 508 405 HOH HOH . S 5 HOH A 9 509 426 HOH HOH . S 5 HOH A 10 510 424 HOH HOH . S 5 HOH A 11 511 401 HOH HOH . S 5 HOH A 12 512 402 HOH HOH . S 5 HOH A 13 513 403 HOH HOH . S 5 HOH A 14 514 404 HOH HOH . S 5 HOH A 15 515 406 HOH HOH . S 5 HOH A 16 516 407 HOH HOH . S 5 HOH A 17 517 408 HOH HOH . S 5 HOH A 18 518 409 HOH HOH . S 5 HOH A 19 519 410 HOH HOH . S 5 HOH A 20 520 413 HOH HOH . S 5 HOH A 21 521 414 HOH HOH . S 5 HOH A 22 522 415 HOH HOH . S 5 HOH A 23 523 416 HOH HOH . S 5 HOH A 24 524 419 HOH HOH . S 5 HOH A 25 525 420 HOH HOH . S 5 HOH A 26 526 422 HOH HOH . S 5 HOH A 27 527 423 HOH HOH . S 5 HOH A 28 528 427 HOH HOH . S 5 HOH A 29 529 428 HOH HOH . S 5 HOH A 30 530 429 HOH HOH . S 5 HOH A 31 531 431 HOH HOH . S 5 HOH A 32 532 432 HOH HOH . S 5 HOH A 33 533 435 HOH HOH . S 5 HOH A 34 534 436 HOH HOH . S 5 HOH A 35 535 438 HOH HOH . S 5 HOH A 36 536 439 HOH HOH . S 5 HOH A 37 537 440 HOH HOH . S 5 HOH A 38 538 441 HOH HOH . S 5 HOH A 39 539 442 HOH HOH . S 5 HOH A 40 540 443 HOH HOH . S 5 HOH A 41 541 444 HOH HOH . T 5 HOH B 1 501 437 HOH HOH . T 5 HOH B 2 502 428 HOH HOH . T 5 HOH B 3 503 415 HOH HOH . T 5 HOH B 4 504 414 HOH HOH . T 5 HOH B 5 505 404 HOH HOH . T 5 HOH B 6 506 418 HOH HOH . T 5 HOH B 7 507 424 HOH HOH . T 5 HOH B 8 508 426 HOH HOH . T 5 HOH B 9 509 429 HOH HOH . T 5 HOH B 10 510 421 HOH HOH . T 5 HOH B 11 511 416 HOH HOH . T 5 HOH B 12 512 418 HOH HOH . T 5 HOH B 13 513 411 HOH HOH . T 5 HOH B 14 514 430 HOH HOH . T 5 HOH B 15 515 401 HOH HOH . T 5 HOH B 16 516 402 HOH HOH . T 5 HOH B 17 517 403 HOH HOH . T 5 HOH B 18 518 405 HOH HOH . T 5 HOH B 19 519 406 HOH HOH . T 5 HOH B 20 520 407 HOH HOH . T 5 HOH B 21 521 408 HOH HOH . T 5 HOH B 22 522 410 HOH HOH . T 5 HOH B 23 523 411 HOH HOH . T 5 HOH B 24 524 412 HOH HOH . T 5 HOH B 25 525 413 HOH HOH . T 5 HOH B 26 526 417 HOH HOH . T 5 HOH B 27 527 419 HOH HOH . T 5 HOH B 28 528 420 HOH HOH . T 5 HOH B 29 529 422 HOH HOH . T 5 HOH B 30 530 423 HOH HOH . T 5 HOH B 31 531 425 HOH HOH . T 5 HOH B 32 532 427 HOH HOH . T 5 HOH B 33 533 430 HOH HOH . U 5 HOH C 1 501 410 HOH HOH . U 5 HOH C 2 502 433 HOH HOH . U 5 HOH C 3 503 435 HOH HOH . U 5 HOH C 4 504 423 HOH HOH . U 5 HOH C 5 505 405 HOH HOH . U 5 HOH C 6 506 420 HOH HOH . U 5 HOH C 7 507 442 HOH HOH . U 5 HOH C 8 508 412 HOH HOH . U 5 HOH C 9 509 401 HOH HOH . U 5 HOH C 10 510 402 HOH HOH . U 5 HOH C 11 511 403 HOH HOH . U 5 HOH C 12 512 404 HOH HOH . U 5 HOH C 13 513 406 HOH HOH . U 5 HOH C 14 514 407 HOH HOH . U 5 HOH C 15 515 408 HOH HOH . U 5 HOH C 16 516 409 HOH HOH . U 5 HOH C 17 517 410 HOH HOH . U 5 HOH C 18 518 411 HOH HOH . U 5 HOH C 19 519 413 HOH HOH . U 5 HOH C 20 520 414 HOH HOH . U 5 HOH C 21 521 415 HOH HOH . U 5 HOH C 22 522 416 HOH HOH . U 5 HOH C 23 523 417 HOH HOH . U 5 HOH C 24 524 418 HOH HOH . U 5 HOH C 25 525 419 HOH HOH . U 5 HOH C 26 526 421 HOH HOH . U 5 HOH C 27 527 422 HOH HOH . U 5 HOH C 28 528 424 HOH HOH . U 5 HOH C 29 529 425 HOH HOH . U 5 HOH C 30 530 426 HOH HOH . U 5 HOH C 31 531 427 HOH HOH . U 5 HOH C 32 532 428 HOH HOH . U 5 HOH C 33 533 429 HOH HOH . U 5 HOH C 34 534 430 HOH HOH . U 5 HOH C 35 535 431 HOH HOH . U 5 HOH C 36 536 432 HOH HOH . U 5 HOH C 37 537 434 HOH HOH . U 5 HOH C 38 538 436 HOH HOH . U 5 HOH C 39 539 437 HOH HOH . U 5 HOH C 40 540 438 HOH HOH . U 5 HOH C 41 541 439 HOH HOH . U 5 HOH C 42 542 440 HOH HOH . U 5 HOH C 43 543 441 HOH HOH . U 5 HOH C 44 544 443 HOH HOH . U 5 HOH C 45 545 444 HOH HOH . U 5 HOH C 46 546 445 HOH HOH . U 5 HOH C 47 547 446 HOH HOH . U 5 HOH C 48 548 447 HOH HOH . U 5 HOH C 49 549 448 HOH HOH . U 5 HOH C 50 550 449 HOH HOH . U 5 HOH C 51 551 450 HOH HOH . V 5 HOH D 1 501 421 HOH HOH . V 5 HOH D 2 502 416 HOH HOH . V 5 HOH D 3 503 422 HOH HOH . V 5 HOH D 4 504 409 HOH HOH . V 5 HOH D 5 505 419 HOH HOH . V 5 HOH D 6 506 426 HOH HOH . V 5 HOH D 7 507 418 HOH HOH . V 5 HOH D 8 508 427 HOH HOH . V 5 HOH D 9 509 424 HOH HOH . V 5 HOH D 10 510 405 HOH HOH . V 5 HOH D 11 511 425 HOH HOH . V 5 HOH D 12 512 402 HOH HOH . V 5 HOH D 13 513 401 HOH HOH . V 5 HOH D 14 514 403 HOH HOH . V 5 HOH D 15 515 404 HOH HOH . V 5 HOH D 16 516 406 HOH HOH . V 5 HOH D 17 517 407 HOH HOH . V 5 HOH D 18 518 408 HOH HOH . V 5 HOH D 19 519 411 HOH HOH . V 5 HOH D 20 520 412 HOH HOH . V 5 HOH D 21 521 413 HOH HOH . V 5 HOH D 22 522 414 HOH HOH . V 5 HOH D 23 523 415 HOH HOH . V 5 HOH D 24 524 417 HOH HOH . V 5 HOH D 25 525 420 HOH HOH . V 5 HOH D 26 526 423 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x 49.633 _atom_site.Cartn_y -5.089 _atom_site.Cartn_z 56.165 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 96 _model_server_stats.create_model_time_ms 141 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #