data_4W8J # _model_server_result.job_id 2D2irHxHc29MsPuvFhffPw _model_server_result.datetime_utc '2024-10-28 02:30:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w8j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 4W8J # _exptl.entry_id 4W8J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4W8J _cell.length_a 87.314 _cell.length_b 87.314 _cell.length_c 266.396 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W8J _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 133.198 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 561 A SER 561 1_555 C K K . A K 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc2 A O ASN 564 A ASN 564 1_555 C K K . A K 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 A OD2 ASP 569 A ASP 569 1_555 C K K . A K 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc4 A O LEU 744 A LEU 744 1_555 B K K . A K 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.117 ? metalc ? metalc5 A O ASP 983 A ASP 983 1_555 E CA CA . A CA 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc6 A O SER 1007 A SER 1007 1_555 E CA CA . A CA 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 A O ASP 1169 A ASP 1169 1_555 E CA CA . A CA 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? metalc ? metalc8 A OD1 ASP 1169 A ASP 1169 1_555 E CA CA . A CA 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4W8J _atom_sites.fract_transf_matrix[1][1] 0.011453 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011453 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003754 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 1201 2 K K . C 2 K A 1 1202 3 K K . D 2 K A 1 1203 4 K K . E 3 CA A 1 1204 1 CA CA . F 4 HOH A 1 1301 76 HOH HOH . F 4 HOH A 2 1302 69 HOH HOH . F 4 HOH A 3 1303 62 HOH HOH . F 4 HOH A 4 1304 72 HOH HOH . F 4 HOH A 5 1305 75 HOH HOH . F 4 HOH A 6 1306 74 HOH HOH . F 4 HOH A 7 1307 14 HOH HOH . F 4 HOH A 8 1308 63 HOH HOH . F 4 HOH A 9 1309 34 HOH HOH . F 4 HOH A 10 1310 37 HOH HOH . F 4 HOH A 11 1311 82 HOH HOH . F 4 HOH A 12 1312 84 HOH HOH . F 4 HOH A 13 1313 40 HOH HOH . F 4 HOH A 14 1314 79 HOH HOH . F 4 HOH A 15 1315 70 HOH HOH . F 4 HOH A 16 1316 73 HOH HOH . F 4 HOH A 17 1317 66 HOH HOH . F 4 HOH A 18 1318 67 HOH HOH . F 4 HOH A 19 1319 80 HOH HOH . F 4 HOH A 20 1320 1 HOH HOH . F 4 HOH A 21 1321 2 HOH HOH . F 4 HOH A 22 1322 5 HOH HOH . F 4 HOH A 23 1323 7 HOH HOH . F 4 HOH A 24 1324 8 HOH HOH . F 4 HOH A 25 1325 18 HOH HOH . F 4 HOH A 26 1326 28 HOH HOH . F 4 HOH A 27 1327 29 HOH HOH . F 4 HOH A 28 1328 31 HOH HOH . F 4 HOH A 29 1329 36 HOH HOH . F 4 HOH A 30 1330 38 HOH HOH . F 4 HOH A 31 1331 49 HOH HOH . F 4 HOH A 32 1332 52 HOH HOH . F 4 HOH A 33 1333 53 HOH HOH . F 4 HOH A 34 1334 65 HOH HOH . F 4 HOH A 35 1335 68 HOH HOH . F 4 HOH A 36 1336 77 HOH HOH . F 4 HOH A 37 1337 81 HOH HOH . F 4 HOH A 38 1338 83 HOH HOH . F 4 HOH A 39 1339 85 HOH HOH . F 4 HOH A 40 1340 86 HOH HOH . F 4 HOH A 41 1341 87 HOH HOH . F 4 HOH A 42 1342 89 HOH HOH . F 4 HOH A 43 1343 93 HOH HOH . F 4 HOH A 44 1344 94 HOH HOH . F 4 HOH A 45 1345 96 HOH HOH . F 4 HOH A 46 1346 97 HOH HOH . F 4 HOH A 47 1347 98 HOH HOH . F 4 HOH A 48 1348 99 HOH HOH . F 4 HOH A 49 1349 100 HOH HOH . F 4 HOH A 50 1350 101 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -35.57 _atom_site.Cartn_y -5.347 _atom_site.Cartn_z 15.391 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 90.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #