data_4W9X # _model_server_result.job_id RqpZLgV_BPCnlzngLc9gDg _model_server_result.datetime_utc '2024-11-26 22:08:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w9x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4W9X # _exptl.entry_id 4W9X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4W9X _cell.length_a 42.31 _cell.length_b 111.41 _cell.length_c 163.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W9X _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 129 n n C1 C2 EDO sing 130 n n C1 H11 EDO sing 131 n n C1 H12 EDO sing 132 n n O1 HO1 EDO sing 133 n n C2 O2 EDO sing 134 n n C2 H21 EDO sing 135 n n C2 H22 EDO sing 136 n n O2 HO2 EDO sing 137 n n # _atom_sites.entry_id 4W9X _atom_sites.fract_transf_matrix[1][1] 0.023635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 343 EDO EDO . C 2 EDO A 1 402 344 EDO EDO . D 3 3JW A 1 403 345 3JW DRG . E 4 HOH A 1 501 474 HOH HOH . E 4 HOH A 2 502 445 HOH HOH . E 4 HOH A 3 503 376 HOH HOH . E 4 HOH A 4 504 383 HOH HOH . E 4 HOH A 5 505 454 HOH HOH . E 4 HOH A 6 506 402 HOH HOH . E 4 HOH A 7 507 442 HOH HOH . E 4 HOH A 8 508 450 HOH HOH . E 4 HOH A 9 509 382 HOH HOH . E 4 HOH A 10 510 424 HOH HOH . E 4 HOH A 11 511 418 HOH HOH . E 4 HOH A 12 512 449 HOH HOH . E 4 HOH A 13 513 463 HOH HOH . E 4 HOH A 14 514 399 HOH HOH . E 4 HOH A 15 515 430 HOH HOH . E 4 HOH A 16 516 455 HOH HOH . E 4 HOH A 17 517 464 HOH HOH . E 4 HOH A 18 518 468 HOH HOH . E 4 HOH A 19 519 456 HOH HOH . E 4 HOH A 20 520 351 HOH HOH . E 4 HOH A 21 521 352 HOH HOH . E 4 HOH A 22 522 421 HOH HOH . E 4 HOH A 23 523 431 HOH HOH . E 4 HOH A 24 524 391 HOH HOH . E 4 HOH A 25 525 459 HOH HOH . E 4 HOH A 26 526 408 HOH HOH . E 4 HOH A 27 527 356 HOH HOH . E 4 HOH A 28 528 396 HOH HOH . E 4 HOH A 29 529 358 HOH HOH . E 4 HOH A 30 530 403 HOH HOH . E 4 HOH A 31 531 465 HOH HOH . E 4 HOH A 32 532 388 HOH HOH . E 4 HOH A 33 533 415 HOH HOH . E 4 HOH A 34 534 350 HOH HOH . E 4 HOH A 35 535 433 HOH HOH . E 4 HOH A 36 536 346 HOH HOH . E 4 HOH A 37 537 347 HOH HOH . E 4 HOH A 38 538 348 HOH HOH . E 4 HOH A 39 539 349 HOH HOH . E 4 HOH A 40 540 353 HOH HOH . E 4 HOH A 41 541 354 HOH HOH . E 4 HOH A 42 542 355 HOH HOH . E 4 HOH A 43 543 357 HOH HOH . E 4 HOH A 44 544 359 HOH HOH . E 4 HOH A 45 545 360 HOH HOH . E 4 HOH A 46 546 361 HOH HOH . E 4 HOH A 47 547 362 HOH HOH . E 4 HOH A 48 548 363 HOH HOH . E 4 HOH A 49 549 364 HOH HOH . E 4 HOH A 50 550 365 HOH HOH . E 4 HOH A 51 551 366 HOH HOH . E 4 HOH A 52 552 367 HOH HOH . E 4 HOH A 53 553 368 HOH HOH . E 4 HOH A 54 554 369 HOH HOH . E 4 HOH A 55 555 370 HOH HOH . E 4 HOH A 56 556 371 HOH HOH . E 4 HOH A 57 557 372 HOH HOH . E 4 HOH A 58 558 373 HOH HOH . E 4 HOH A 59 559 374 HOH HOH . E 4 HOH A 60 560 375 HOH HOH . E 4 HOH A 61 561 377 HOH HOH . E 4 HOH A 62 562 378 HOH HOH . E 4 HOH A 63 563 379 HOH HOH . E 4 HOH A 64 564 380 HOH HOH . E 4 HOH A 65 565 381 HOH HOH . E 4 HOH A 66 566 384 HOH HOH . E 4 HOH A 67 567 385 HOH HOH . E 4 HOH A 68 568 386 HOH HOH . E 4 HOH A 69 569 387 HOH HOH . E 4 HOH A 70 570 389 HOH HOH . E 4 HOH A 71 571 390 HOH HOH . E 4 HOH A 72 572 392 HOH HOH . E 4 HOH A 73 573 393 HOH HOH . E 4 HOH A 74 574 394 HOH HOH . E 4 HOH A 75 575 395 HOH HOH . E 4 HOH A 76 576 397 HOH HOH . E 4 HOH A 77 577 398 HOH HOH . E 4 HOH A 78 578 400 HOH HOH . E 4 HOH A 79 579 401 HOH HOH . E 4 HOH A 80 580 404 HOH HOH . E 4 HOH A 81 581 405 HOH HOH . E 4 HOH A 82 582 406 HOH HOH . E 4 HOH A 83 583 407 HOH HOH . E 4 HOH A 84 584 409 HOH HOH . E 4 HOH A 85 585 410 HOH HOH . E 4 HOH A 86 586 411 HOH HOH . E 4 HOH A 87 587 412 HOH HOH . E 4 HOH A 88 588 413 HOH HOH . E 4 HOH A 89 589 414 HOH HOH . E 4 HOH A 90 590 416 HOH HOH . E 4 HOH A 91 591 417 HOH HOH . E 4 HOH A 92 592 419 HOH HOH . E 4 HOH A 93 593 420 HOH HOH . E 4 HOH A 94 594 422 HOH HOH . E 4 HOH A 95 595 423 HOH HOH . E 4 HOH A 96 596 425 HOH HOH . E 4 HOH A 97 597 426 HOH HOH . E 4 HOH A 98 598 427 HOH HOH . E 4 HOH A 99 599 428 HOH HOH . E 4 HOH A 100 600 429 HOH HOH . E 4 HOH A 101 601 432 HOH HOH . E 4 HOH A 102 602 434 HOH HOH . E 4 HOH A 103 603 435 HOH HOH . E 4 HOH A 104 604 436 HOH HOH . E 4 HOH A 105 605 437 HOH HOH . E 4 HOH A 106 606 438 HOH HOH . E 4 HOH A 107 607 439 HOH HOH . E 4 HOH A 108 608 440 HOH HOH . E 4 HOH A 109 609 441 HOH HOH . E 4 HOH A 110 610 443 HOH HOH . E 4 HOH A 111 611 444 HOH HOH . E 4 HOH A 112 612 446 HOH HOH . E 4 HOH A 113 613 447 HOH HOH . E 4 HOH A 114 614 448 HOH HOH . E 4 HOH A 115 615 451 HOH HOH . E 4 HOH A 116 616 452 HOH HOH . E 4 HOH A 117 617 453 HOH HOH . E 4 HOH A 118 618 457 HOH HOH . E 4 HOH A 119 619 458 HOH HOH . E 4 HOH A 120 620 460 HOH HOH . E 4 HOH A 121 621 461 HOH HOH . E 4 HOH A 122 622 462 HOH HOH . E 4 HOH A 123 623 466 HOH HOH . E 4 HOH A 124 624 467 HOH HOH . E 4 HOH A 125 625 469 HOH HOH . E 4 HOH A 126 626 470 HOH HOH . E 4 HOH A 127 627 471 HOH HOH . E 4 HOH A 128 628 472 HOH HOH . E 4 HOH A 129 629 473 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 8.982 -37.659 -32.867 1 48.09 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . B 2 8.493 -37.007 -34.045 1 46.02 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . B 2 10.031 -36.79 -32.195 1 48.55 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . B 2 9.395 -35.708 -31.52 1 50.03 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #