data_4W9X # _model_server_result.job_id iwcWm-DtXVMF02AZRVlQHQ _model_server_result.datetime_utc '2024-11-23 05:37:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w9x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4W9X # _exptl.entry_id 4W9X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.417 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Baricitinib _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4W9X _cell.length_a 42.31 _cell.length_b 111.41 _cell.length_c 163.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W9X _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H17 N7 O2 S' _chem_comp.formula_weight 371.417 _chem_comp.id 3JW _chem_comp.mon_nstd_flag . _chem_comp.name Baricitinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 3JW doub 1 n y N1 C6 3JW sing 2 n y C2 N3 3JW sing 3 n y NAT C6 3JW sing 4 n y NAT CAS 3JW sing 5 n y C6 C5 3JW doub 6 n y N3 C4 3JW doub 7 n y CAS CAR 3JW doub 8 n y C5 C4 3JW sing 9 n y C5 CAR 3JW sing 10 n y C4 CAM 3JW sing 11 n n CAM CAN 3JW sing 12 n y CAM CAL 3JW doub 13 n y CAN NAO 3JW doub 14 n y CAL NAK 3JW sing 15 n y NAO NAK 3JW sing 16 n y NAK CAF 3JW sing 17 n n CAF CAG 3JW sing 18 n n CAF CAJ 3JW sing 19 n n CAF CAE 3JW sing 20 n n CAG CAH 3JW sing 21 n n CAJ NAD 3JW sing 22 n n CAE NAD 3JW sing 23 n n NAD SAC 3JW sing 24 n n CAA CAB 3JW sing 25 n n CAH NAI 3JW trip 26 n n SAC CAB 3JW sing 27 n n SAC OAY 3JW doub 28 n n SAC OAZ 3JW doub 29 n n CAA H1 3JW sing 30 n n CAA H2 3JW sing 31 n n CAA H3 3JW sing 32 n n CAB H4 3JW sing 33 n n CAB H5 3JW sing 34 n n CAJ H6 3JW sing 35 n n CAJ H7 3JW sing 36 n n CAE H8 3JW sing 37 n n CAE H9 3JW sing 38 n n CAG H10 3JW sing 39 n n CAG H11 3JW sing 40 n n CAL H12 3JW sing 41 n n CAN H13 3JW sing 42 n n C2 H14 3JW sing 43 n n CAR H15 3JW sing 44 n n CAS H16 3JW sing 45 n n NAT H17 3JW sing 46 n n # _atom_sites.entry_id 4W9X _atom_sites.fract_transf_matrix[1][1] 0.023635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 343 EDO EDO . C 2 EDO A 1 402 344 EDO EDO . D 3 3JW A 1 403 345 3JW DRG . E 4 HOH A 1 501 474 HOH HOH . E 4 HOH A 2 502 445 HOH HOH . E 4 HOH A 3 503 376 HOH HOH . E 4 HOH A 4 504 383 HOH HOH . E 4 HOH A 5 505 454 HOH HOH . E 4 HOH A 6 506 402 HOH HOH . E 4 HOH A 7 507 442 HOH HOH . E 4 HOH A 8 508 450 HOH HOH . E 4 HOH A 9 509 382 HOH HOH . E 4 HOH A 10 510 424 HOH HOH . E 4 HOH A 11 511 418 HOH HOH . E 4 HOH A 12 512 449 HOH HOH . E 4 HOH A 13 513 463 HOH HOH . E 4 HOH A 14 514 399 HOH HOH . E 4 HOH A 15 515 430 HOH HOH . E 4 HOH A 16 516 455 HOH HOH . E 4 HOH A 17 517 464 HOH HOH . E 4 HOH A 18 518 468 HOH HOH . E 4 HOH A 19 519 456 HOH HOH . E 4 HOH A 20 520 351 HOH HOH . E 4 HOH A 21 521 352 HOH HOH . E 4 HOH A 22 522 421 HOH HOH . E 4 HOH A 23 523 431 HOH HOH . E 4 HOH A 24 524 391 HOH HOH . E 4 HOH A 25 525 459 HOH HOH . E 4 HOH A 26 526 408 HOH HOH . E 4 HOH A 27 527 356 HOH HOH . E 4 HOH A 28 528 396 HOH HOH . E 4 HOH A 29 529 358 HOH HOH . E 4 HOH A 30 530 403 HOH HOH . E 4 HOH A 31 531 465 HOH HOH . E 4 HOH A 32 532 388 HOH HOH . E 4 HOH A 33 533 415 HOH HOH . E 4 HOH A 34 534 350 HOH HOH . E 4 HOH A 35 535 433 HOH HOH . E 4 HOH A 36 536 346 HOH HOH . E 4 HOH A 37 537 347 HOH HOH . E 4 HOH A 38 538 348 HOH HOH . E 4 HOH A 39 539 349 HOH HOH . E 4 HOH A 40 540 353 HOH HOH . E 4 HOH A 41 541 354 HOH HOH . E 4 HOH A 42 542 355 HOH HOH . E 4 HOH A 43 543 357 HOH HOH . E 4 HOH A 44 544 359 HOH HOH . E 4 HOH A 45 545 360 HOH HOH . E 4 HOH A 46 546 361 HOH HOH . E 4 HOH A 47 547 362 HOH HOH . E 4 HOH A 48 548 363 HOH HOH . E 4 HOH A 49 549 364 HOH HOH . E 4 HOH A 50 550 365 HOH HOH . E 4 HOH A 51 551 366 HOH HOH . E 4 HOH A 52 552 367 HOH HOH . E 4 HOH A 53 553 368 HOH HOH . E 4 HOH A 54 554 369 HOH HOH . E 4 HOH A 55 555 370 HOH HOH . E 4 HOH A 56 556 371 HOH HOH . E 4 HOH A 57 557 372 HOH HOH . E 4 HOH A 58 558 373 HOH HOH . E 4 HOH A 59 559 374 HOH HOH . E 4 HOH A 60 560 375 HOH HOH . E 4 HOH A 61 561 377 HOH HOH . E 4 HOH A 62 562 378 HOH HOH . E 4 HOH A 63 563 379 HOH HOH . E 4 HOH A 64 564 380 HOH HOH . E 4 HOH A 65 565 381 HOH HOH . E 4 HOH A 66 566 384 HOH HOH . E 4 HOH A 67 567 385 HOH HOH . E 4 HOH A 68 568 386 HOH HOH . E 4 HOH A 69 569 387 HOH HOH . E 4 HOH A 70 570 389 HOH HOH . E 4 HOH A 71 571 390 HOH HOH . E 4 HOH A 72 572 392 HOH HOH . E 4 HOH A 73 573 393 HOH HOH . E 4 HOH A 74 574 394 HOH HOH . E 4 HOH A 75 575 395 HOH HOH . E 4 HOH A 76 576 397 HOH HOH . E 4 HOH A 77 577 398 HOH HOH . E 4 HOH A 78 578 400 HOH HOH . E 4 HOH A 79 579 401 HOH HOH . E 4 HOH A 80 580 404 HOH HOH . E 4 HOH A 81 581 405 HOH HOH . E 4 HOH A 82 582 406 HOH HOH . E 4 HOH A 83 583 407 HOH HOH . E 4 HOH A 84 584 409 HOH HOH . E 4 HOH A 85 585 410 HOH HOH . E 4 HOH A 86 586 411 HOH HOH . E 4 HOH A 87 587 412 HOH HOH . E 4 HOH A 88 588 413 HOH HOH . E 4 HOH A 89 589 414 HOH HOH . E 4 HOH A 90 590 416 HOH HOH . E 4 HOH A 91 591 417 HOH HOH . E 4 HOH A 92 592 419 HOH HOH . E 4 HOH A 93 593 420 HOH HOH . E 4 HOH A 94 594 422 HOH HOH . E 4 HOH A 95 595 423 HOH HOH . E 4 HOH A 96 596 425 HOH HOH . E 4 HOH A 97 597 426 HOH HOH . E 4 HOH A 98 598 427 HOH HOH . E 4 HOH A 99 599 428 HOH HOH . E 4 HOH A 100 600 429 HOH HOH . E 4 HOH A 101 601 432 HOH HOH . E 4 HOH A 102 602 434 HOH HOH . E 4 HOH A 103 603 435 HOH HOH . E 4 HOH A 104 604 436 HOH HOH . E 4 HOH A 105 605 437 HOH HOH . E 4 HOH A 106 606 438 HOH HOH . E 4 HOH A 107 607 439 HOH HOH . E 4 HOH A 108 608 440 HOH HOH . E 4 HOH A 109 609 441 HOH HOH . E 4 HOH A 110 610 443 HOH HOH . E 4 HOH A 111 611 444 HOH HOH . E 4 HOH A 112 612 446 HOH HOH . E 4 HOH A 113 613 447 HOH HOH . E 4 HOH A 114 614 448 HOH HOH . E 4 HOH A 115 615 451 HOH HOH . E 4 HOH A 116 616 452 HOH HOH . E 4 HOH A 117 617 453 HOH HOH . E 4 HOH A 118 618 457 HOH HOH . E 4 HOH A 119 619 458 HOH HOH . E 4 HOH A 120 620 460 HOH HOH . E 4 HOH A 121 621 461 HOH HOH . E 4 HOH A 122 622 462 HOH HOH . E 4 HOH A 123 623 466 HOH HOH . E 4 HOH A 124 624 467 HOH HOH . E 4 HOH A 125 625 469 HOH HOH . E 4 HOH A 126 626 470 HOH HOH . E 4 HOH A 127 627 471 HOH HOH . E 4 HOH A 128 628 472 HOH HOH . E 4 HOH A 129 629 473 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 3JW . . . D 3 -3.735 -19.475 -33.479 1 22.66 ? C4 3JW 403 A 1 HETATM 2 C C5 3JW . . . D 3 -2.447 -19.55 -33.932 1 20.2 ? C5 3JW 403 A 1 HETATM 3 C C6 3JW . . . D 3 -2.146 -19.732 -35.242 1 20.58 ? C6 3JW 403 A 1 HETATM 4 N N1 3JW . . . D 3 -3.092 -19.883 -36.149 1 20.76 ? N1 3JW 403 A 1 HETATM 5 N N3 3JW . . . D 3 -4.739 -19.631 -34.371 1 21.24 ? N3 3JW 403 A 1 HETATM 6 C CAA 3JW . . . D 3 -4.11 -14.51 -26.984 1 43.19 ? CAA 3JW 403 A 1 HETATM 7 C CAB 3JW . . . D 3 -4.729 -15.494 -25.974 1 45.16 ? CAB 3JW 403 A 1 HETATM 8 S SAC 3JW . . . D 3 -3.666 -16.944 -26.035 1 46.02 ? SAC 3JW 403 A 1 HETATM 9 O OAY 3JW . . . D 3 -2.211 -16.46 -25.967 1 41.54 ? OAY 3JW 403 A 1 HETATM 10 O OAZ 3JW . . . D 3 -3.892 -17.944 -24.91 1 43.42 ? OAZ 3JW 403 A 1 HETATM 11 N NAD 3JW . . . D 3 -3.941 -17.643 -27.618 1 39.24 ? NAD 3JW 403 A 1 HETATM 12 C CAJ 3JW . . . D 3 -2.887 -18.592 -28.009 1 34.65 ? CAJ 3JW 403 A 1 HETATM 13 C CAE 3JW . . . D 3 -4.966 -18.696 -27.651 1 37.08 ? CAE 3JW 403 A 1 HETATM 14 C CAF 3JW . . . D 3 -3.995 -19.444 -28.554 1 34.8 ? CAF 3JW 403 A 1 HETATM 15 C CAG 3JW . . . D 3 -3.858 -20.942 -28.187 1 36.22 ? CAG 3JW 403 A 1 HETATM 16 C CAH 3JW . . . D 3 -3.532 -21.212 -26.738 1 38.79 ? CAH 3JW 403 A 1 HETATM 17 N NAI 3JW . . . D 3 -3.301 -21.412 -25.699 1 38.17 ? NAI 3JW 403 A 1 HETATM 18 N NAK 3JW . . . D 3 -4.293 -19.365 -30.028 1 28.2 ? NAK 3JW 403 A 1 HETATM 19 C CAL 3JW . . . D 3 -3.442 -19.403 -31.04 1 24.35 ? CAL 3JW 403 A 1 HETATM 20 N NAO 3JW . . . D 3 -5.553 -19.395 -30.487 1 26.43 ? NAO 3JW 403 A 1 HETATM 21 C CAN 3JW . . . D 3 -5.458 -19.426 -31.819 1 27.31 ? CAN 3JW 403 A 1 HETATM 22 C CAM 3JW . . . D 3 -4.153 -19.384 -32.173 1 24.64 ? CAM 3JW 403 A 1 HETATM 23 C C2 3JW . . . D 3 -4.431 -19.825 -35.73 1 22.62 ? C2 3JW 403 A 1 HETATM 24 C CAR 3JW . . . D 3 -1.241 -19.449 -33.329 1 21.53 ? CAR 3JW 403 A 1 HETATM 25 C CAS 3JW . . . D 3 -0.245 -19.574 -34.234 1 21.3 ? CAS 3JW 403 A 1 HETATM 26 N NAT 3JW . . . D 3 -0.813 -19.762 -35.428 1 21.08 ? NAT 3JW 403 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #