data_4WAB
#
_model_server_result.job_id            HeA3_ZVw-2xw6Xdlq1ikEw 
_model_server_result.datetime_utc      '2024-11-14 06:51:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wab 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    4WAB 
#
_exptl.entry_id    4WAB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              618.475 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[2,6-bis(chloranyl)-3-[(2,2-dimethylpropanoylamino)methyl]phenyl]amino]-1-methyl-6-(2-methyl-2-oxidanyl-propoxy)-N-[2,2,2-tris(fluoranyl)ethyl]benzimidazole-5-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4WAB 
_cell.length_a            86.72 
_cell.length_b            86.72 
_cell.length_c            180.36 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WAB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 43.36 75.101723 0 
3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -43.36 75.101723 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H32 Cl2 F3 N5 O4' 
_chem_comp.formula_weight    618.475 
_chem_comp.id                LVJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[2,6-bis(chloranyl)-3-[(2,2-dimethylpropanoylamino)methyl]phenyl]amino]-1-methyl-6-(2-methyl-2-oxidanyl-propoxy)-N-[2,2,2-tris(fluoranyl)ethyl]benzimidazole-5-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C22 LVJ doub 230 n n 
C22 C23 LVJ sing 231 n n 
C22 N4 LVJ sing 232 n n 
C23 C26 LVJ sing 233 n n 
C23 C25 LVJ sing 234 n n 
C23 C24 LVJ sing 235 n n 
N4 C21 LVJ sing 236 n n 
C21 C19 LVJ sing 237 n n 
C19 C18 LVJ sing 238 n y 
C19 C20 LVJ doub 239 n y 
C18 C17 LVJ doub 240 n y 
C17 C16 LVJ sing 241 n y 
C16 CL LVJ sing 242 n n 
C16 C15 LVJ doub 243 n y 
C20 CL1 LVJ sing 244 n n 
C20 C15 LVJ sing 245 n y 
C15 N3 LVJ sing 246 n n 
N3 C1 LVJ sing 247 n n 
C1 N1 LVJ doub 248 n y 
C1 N LVJ sing 249 n y 
N1 C2 LVJ sing 250 n y 
C2 C11 LVJ sing 251 n y 
C2 C3 LVJ doub 252 n y 
C11 N LVJ sing 253 n y 
C11 C10 LVJ doub 254 n y 
N C LVJ sing 255 n n 
C10 C5 LVJ sing 256 n y 
C5 O LVJ sing 257 n n 
C5 C4 LVJ doub 258 n y 
O C6 LVJ sing 259 n n 
C6 C7 LVJ sing 260 n n 
C7 O1 LVJ sing 261 n n 
C7 C9 LVJ sing 262 n n 
C7 C8 LVJ sing 263 n n 
C4 C3 LVJ sing 264 n y 
C4 C12 LVJ sing 265 n n 
C12 O2 LVJ doub 266 n n 
C12 N2 LVJ sing 267 n n 
N2 C13 LVJ sing 268 n n 
C14 F LVJ sing 269 n n 
C14 F1 LVJ sing 270 n n 
C14 F2 LVJ sing 271 n n 
N4 H4 LVJ sing 272 n n 
C26 H261 LVJ sing 273 n n 
C26 H262 LVJ sing 274 n n 
C26 H263 LVJ sing 275 n n 
C25 H251 LVJ sing 276 n n 
C25 H252 LVJ sing 277 n n 
C25 H253 LVJ sing 278 n n 
C24 H241 LVJ sing 279 n n 
C24 H242 LVJ sing 280 n n 
C24 H243 LVJ sing 281 n n 
C21 H211 LVJ sing 282 n n 
C21 H212 LVJ sing 283 n n 
C18 H18 LVJ sing 284 n n 
C17 H17 LVJ sing 285 n n 
N3 H3 LVJ sing 286 n n 
C3 HA LVJ sing 287 n n 
C10 H10 LVJ sing 288 n n 
C HC1 LVJ sing 289 n n 
C HC2 LVJ sing 290 n n 
C HC3 LVJ sing 291 n n 
C6 H61C LVJ sing 292 n n 
C6 H62C LVJ sing 293 n n 
O1 H1 LVJ sing 294 n n 
C9 H91C LVJ sing 295 n n 
C9 H92C LVJ sing 296 n n 
C9 H93C LVJ sing 297 n n 
C8 H81C LVJ sing 298 n n 
C8 H82C LVJ sing 299 n n 
C8 H83C LVJ sing 300 n n 
N2 H2 LVJ sing 301 n n 
C13 H131 LVJ sing 302 n n 
C13 H132 LVJ sing 303 n n 
C13 C14 LVJ sing 304 n n 
#
_atom_sites.entry_id                     4WAB 
_atom_sites.fract_transf_matrix[1][1]    0.011531 
_atom_sites.fract_transf_matrix[1][2]    0.006658 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GSH A 1 201 1172 GSH GSH . 
C 3 LVJ A 1 202 1173 LVJ LVJ . 
D 4 HOH A 1 301 1 HOH HOH . 
D 4 HOH A 2 302 18 HOH HOH . 
D 4 HOH A 3 303 4 HOH HOH . 
D 4 HOH A 4 304 11 HOH HOH . 
D 4 HOH A 5 305 7 HOH HOH . 
D 4 HOH A 6 306 12 HOH HOH . 
D 4 HOH A 7 307 2 HOH HOH . 
D 4 HOH A 8 308 3 HOH HOH . 
D 4 HOH A 9 309 6 HOH HOH . 
D 4 HOH A 10 310 9 HOH HOH . 
D 4 HOH A 11 311 10 HOH HOH . 
D 4 HOH A 12 312 14 HOH HOH . 
D 4 HOH A 13 313 16 HOH HOH . 
D 4 HOH A 14 314 21 HOH HOH . 
D 4 HOH A 15 315 22 HOH HOH . 
D 4 HOH A 16 316 24 HOH HOH . 
D 4 HOH A 17 317 26 HOH HOH . 
D 4 HOH A 18 318 27 HOH HOH . 
D 4 HOH A 19 319 29 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 LVJ . . . C 3 18.325 53.524 79.336 1 72.86 ? O3 LVJ 202 A 1 
HETATM 2 C C22 LVJ . . . C 3 17.904 52.461 78.902 1 72.4 ? C22 LVJ 202 A 1 
HETATM 3 C C23 LVJ . . . C 3 17.854 52.16 77.401 1 74.81 ? C23 LVJ 202 A 1 
HETATM 4 C C26 LVJ . . . C 3 18.856 53.041 76.664 1 75.52 ? C26 LVJ 202 A 1 
HETATM 5 C C25 LVJ . . . C 3 18.215 50.695 77.153 1 75.56 ? C25 LVJ 202 A 1 
HETATM 6 C C24 LVJ . . . C 3 16.452 52.437 76.857 1 70.73 ? C24 LVJ 202 A 1 
HETATM 7 N N4 LVJ . . . C 3 17.466 51.491 79.71 1 72.14 ? N4 LVJ 202 A 1 
HETATM 8 C C21 LVJ . . . C 3 17.508 51.605 81.162 1 67.46 ? C21 LVJ 202 A 1 
HETATM 9 C C19 LVJ . . . C 3 18.077 50.379 81.84 1 55.36 ? C19 LVJ 202 A 1 
HETATM 10 C C18 LVJ . . . C 3 17.233 49.479 82.493 1 52.74 ? C18 LVJ 202 A 1 
HETATM 11 C C17 LVJ . . . C 3 17.729 48.304 83.018 1 57.63 ? C17 LVJ 202 A 1 
HETATM 12 C C16 LVJ . . . C 3 19.074 48.012 82.909 1 57.85 ? C16 LVJ 202 A 1 
HETATM 13 CL CL LVJ . . . C 3 19.665 46.509 83.533 1 47.16 ? CL LVJ 202 A 1 
HETATM 14 C C20 LVJ . . . C 3 19.429 50.082 81.768 1 48.93 ? C20 LVJ 202 A 1 
HETATM 15 CL CL1 LVJ . . . C 3 20.5 51.237 81.056 1 47.08 ? CL1 LVJ 202 A 1 
HETATM 16 C C15 LVJ . . . C 3 19.96 48.897 82.291 1 51.03 ? C15 LVJ 202 A 1 
HETATM 17 N N3 LVJ . . . C 3 21.346 48.593 82.191 1 59.87 ? N3 LVJ 202 A 1 
HETATM 18 C C1 LVJ . . . C 3 22.007 48.419 81.016 1 60.92 ? C1 LVJ 202 A 1 
HETATM 19 N N1 LVJ . . . C 3 21.487 48.523 79.82 1 62.88 ? N1 LVJ 202 A 1 
HETATM 20 C C2 LVJ . . . C 3 22.545 48.269 78.946 1 63.02 ? C2 LVJ 202 A 1 
HETATM 21 C C11 LVJ . . . C 3 23.707 48.003 79.674 1 59.99 ? C11 LVJ 202 A 1 
HETATM 22 N N LVJ . . . C 3 23.336 48.109 81.007 1 55.73 ? N LVJ 202 A 1 
HETATM 23 C C LVJ . . . C 3 24.198 47.945 82.173 1 56.83 ? C LVJ 202 A 1 
HETATM 24 C C10 LVJ . . . C 3 24.911 47.706 79.051 1 61.74 ? C10 LVJ 202 A 1 
HETATM 25 C C5 LVJ . . . C 3 24.927 47.693 77.666 1 74.87 ? C5 LVJ 202 A 1 
HETATM 26 O O LVJ . . . C 3 26.052 47.379 76.95 1 90.78 ? O LVJ 202 A 1 
HETATM 27 C C6 LVJ . . . C 3 27.246 47.043 77.684 1 97.62 ? C6 LVJ 202 A 1 
HETATM 28 C C7 LVJ . . . C 3 28.24 46.421 76.732 1 95.33 ? C7 LVJ 202 A 1 
HETATM 29 O O1 LVJ . . . C 3 28.562 47.395 75.719 1 96.75 ? O1 LVJ 202 A 1 
HETATM 30 C C9 LVJ . . . C 3 27.638 45.205 76.038 1 88.07 ? C9 LVJ 202 A 1 
HETATM 31 C C8 LVJ . . . C 3 29.527 46.047 77.463 1 92.36 ? C8 LVJ 202 A 1 
HETATM 32 C C4 LVJ . . . C 3 23.782 47.988 76.905 1 71.01 ? C4 LVJ 202 A 1 
HETATM 33 C C3 LVJ . . . C 3 22.582 48.263 77.561 1 68.18 ? C3 LVJ 202 A 1 
HETATM 34 C C12 LVJ . . . C 3 23.706 48.102 75.413 1 66.48 ? C12 LVJ 202 A 1 
HETATM 35 O O2 LVJ . . . C 3 22.62 48.191 74.849 1 61.76 ? O2 LVJ 202 A 1 
HETATM 36 N N2 LVJ . . . C 3 24.856 48.163 74.739 1 74.21 ? N2 LVJ 202 A 1 
HETATM 37 C C13 LVJ . . . C 3 24.939 48.518 73.33 1 76.38 ? C13 LVJ 202 A 1 
HETATM 38 C C14 LVJ . . . C 3 24.85 47.215 72.454 1 85.21 ? C14 LVJ 202 A 1 
HETATM 39 F F LVJ . . . C 3 25.079 47.458 71.178 1 82.59 ? F LVJ 202 A 1 
HETATM 40 F F1 LVJ . . . C 3 23.649 46.654 72.516 1 94.48 ? F1 LVJ 202 A 1 
HETATM 41 F F2 LVJ . . . C 3 25.732 46.292 72.838 1 78.87 ? F2 LVJ 202 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           218 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           41 
#