data_4WBB
#
_model_server_result.job_id            kknR-nrGFunJAE4orHDzYw 
_model_server_result.datetime_utc      '2024-10-28 11:22:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wbb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4WBB 
#
_exptl.entry_id    4WBB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4WBB 
_cell.length_a            150.38 
_cell.length_b            213.951 
_cell.length_c            61.967 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WBB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        21 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 111 A ALA 111 1_555 A N SEP 112 A SEP 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C SEP 112 A SEP 112 1_555 A N VAL 113 A VAL 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale3 B C PHE 138 B PHE 138 1_555 B N SEP 139 B SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C SEP 139 B SEP 139 1_555 B N GLU 140 B GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale5 B C TRP 196 B TRP 196 1_555 B N TPO 197 B TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 B C TPO 197 B TPO 197 1_555 B N LEU 198 B LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale7 B C VAL 337 B VAL 337 1_555 B N SEP 338 B SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale8 B C SEP 338 B SEP 338 1_555 B N ILE 339 B ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
metalc ? metalc1 A O3P SEP 112 A SEP 112 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc2 C CA CA . A CA 501 1_555 D O2B ADP . A ADP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc3 C CA CA . A CA 501 1_555 B OD1 ASP 184 B ASP 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
metalc ? metalc4 C CA CA . A CA 501 1_555 B OD2 ASP 184 B ASP 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc5 C CA CA . A CA 501 1_555 G O HOH . B HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc6 D O2B ADP . A ADP 502 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? 
metalc ? metalc7 D O3B ADP . A ADP 502 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.163 ? 
metalc ? metalc8 D O2A ADP . A ADP 502 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc9 F O HOH . A HOH 607 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc10 B OD1 ASN 171 B ASN 171 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc11 B OD1 ASP 184 B ASP 184 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc12 E CA CA . B CA 401 1_555 G O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4WBB 
_atom_sites.fract_transf_matrix[1][1]    0.00665 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016138 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CA A 1 501 401 CA CA . 
D 4 ADP A 1 502 400 ADP ADP . 
E 3 CA B 1 401 402 CA CA . 
F 5 HOH A 1 601 31 HOH HOH . 
F 5 HOH A 2 602 6 HOH HOH . 
F 5 HOH A 3 603 29 HOH HOH . 
F 5 HOH A 4 604 39 HOH HOH . 
F 5 HOH A 5 605 42 HOH HOH . 
F 5 HOH A 6 606 17 HOH HOH . 
F 5 HOH A 7 607 1 HOH HOH . 
F 5 HOH A 8 608 2 HOH HOH . 
F 5 HOH A 9 609 7 HOH HOH . 
F 5 HOH A 10 610 9 HOH HOH . 
F 5 HOH A 11 611 11 HOH HOH . 
F 5 HOH A 12 612 13 HOH HOH . 
F 5 HOH A 13 613 14 HOH HOH . 
F 5 HOH A 14 614 15 HOH HOH . 
F 5 HOH A 15 615 16 HOH HOH . 
F 5 HOH A 16 616 18 HOH HOH . 
F 5 HOH A 17 617 19 HOH HOH . 
F 5 HOH A 18 618 20 HOH HOH . 
F 5 HOH A 19 619 22 HOH HOH . 
F 5 HOH A 20 620 24 HOH HOH . 
F 5 HOH A 21 621 26 HOH HOH . 
F 5 HOH A 22 622 36 HOH HOH . 
F 5 HOH A 23 623 37 HOH HOH . 
F 5 HOH A 24 624 38 HOH HOH . 
G 5 HOH B 1 501 25 HOH HOH . 
G 5 HOH B 2 502 30 HOH HOH . 
G 5 HOH B 3 503 3 HOH HOH . 
G 5 HOH B 4 504 4 HOH HOH . 
G 5 HOH B 5 505 5 HOH HOH . 
G 5 HOH B 6 506 8 HOH HOH . 
G 5 HOH B 7 507 10 HOH HOH . 
G 5 HOH B 8 508 12 HOH HOH . 
G 5 HOH B 9 509 21 HOH HOH . 
G 5 HOH B 10 510 23 HOH HOH . 
G 5 HOH B 11 511 27 HOH HOH . 
G 5 HOH B 12 512 28 HOH HOH . 
G 5 HOH B 13 513 32 HOH HOH . 
G 5 HOH B 14 514 33 HOH HOH . 
G 5 HOH B 15 515 34 HOH HOH . 
G 5 HOH B 16 516 35 HOH HOH . 
G 5 HOH B 17 517 40 HOH HOH . 
G 5 HOH B 18 518 41 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               32.078 
_atom_site.Cartn_y               29.961 
_atom_site.Cartn_z               -6.526 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        44.82 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#