data_4WCA # _model_server_result.job_id Mnwpn-iYfMEPct7AKapx-A _model_server_result.datetime_utc '2024-11-29 05:05:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wca # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4WCA # _exptl.entry_id 4WCA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WCA _cell.length_a 40.43 _cell.length_b 47.64 _cell.length_c 107.65 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WCA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 156 A GLY 313 1_555 A N CSX 157 A CSX 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C CSX 157 A CSX 314 1_555 A N ALA 158 A ALA 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 107 n n C1 O2 CIT sing 108 n n C1 C2 CIT sing 109 n n O2 HO2 CIT sing 110 n n C2 C3 CIT sing 111 n n C2 H21 CIT sing 112 n n C2 H22 CIT sing 113 n n C3 O7 CIT sing 114 n n C3 C4 CIT sing 115 n n C3 C6 CIT sing 116 n n O7 HO7 CIT sing 117 n n C4 C5 CIT sing 118 n n C4 H41 CIT sing 119 n n C4 H42 CIT sing 120 n n C5 O3 CIT doub 121 n n C5 O4 CIT sing 122 n n O4 HO4 CIT sing 123 n n C6 O5 CIT doub 124 n n C6 O6 CIT sing 125 n n O6 HO6 CIT sing 126 n n # _atom_sites.entry_id 4WCA _atom_sites.fract_transf_matrix[1][1] 0.024734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 401 1 CIT CIT . C 3 1PE A 1 402 1 1PE 1PE . D 3 1PE A 1 403 1 1PE 1PE . E 3 1PE A 1 404 1 1PE 1PE . F 4 CL A 1 405 1 CL CL . G 3 1PE A 1 406 1 1PE 1PE . H 3 1PE A 1 407 1 1PE 1PE . I 3 1PE A 1 408 1 1PE 1PE . J 5 HOH A 1 501 148 HOH HOH . J 5 HOH A 2 502 80 HOH HOH . J 5 HOH A 3 503 39 HOH HOH . J 5 HOH A 4 504 12 HOH HOH . J 5 HOH A 5 505 139 HOH HOH . J 5 HOH A 6 506 31 HOH HOH . J 5 HOH A 7 507 36 HOH HOH . J 5 HOH A 8 508 34 HOH HOH . J 5 HOH A 9 509 63 HOH HOH . J 5 HOH A 10 510 115 HOH HOH . J 5 HOH A 11 511 38 HOH HOH . J 5 HOH A 12 512 117 HOH HOH . J 5 HOH A 13 513 8 HOH HOH . J 5 HOH A 14 514 69 HOH HOH . J 5 HOH A 15 515 32 HOH HOH . J 5 HOH A 16 516 118 HOH HOH . J 5 HOH A 17 517 53 HOH HOH . J 5 HOH A 18 518 25 HOH HOH . J 5 HOH A 19 519 146 HOH HOH . J 5 HOH A 20 520 92 HOH HOH . J 5 HOH A 21 521 22 HOH HOH . J 5 HOH A 22 522 101 HOH HOH . J 5 HOH A 23 523 58 HOH HOH . J 5 HOH A 24 524 26 HOH HOH . J 5 HOH A 25 525 147 HOH HOH . J 5 HOH A 26 526 143 HOH HOH . J 5 HOH A 27 527 121 HOH HOH . J 5 HOH A 28 528 112 HOH HOH . J 5 HOH A 29 529 126 HOH HOH . J 5 HOH A 30 530 103 HOH HOH . J 5 HOH A 31 531 74 HOH HOH . J 5 HOH A 32 532 123 HOH HOH . J 5 HOH A 33 533 134 HOH HOH . J 5 HOH A 34 534 65 HOH HOH . J 5 HOH A 35 535 124 HOH HOH . J 5 HOH A 36 536 9 HOH HOH . J 5 HOH A 37 537 141 HOH HOH . J 5 HOH A 38 538 30 HOH HOH . J 5 HOH A 39 539 57 HOH HOH . J 5 HOH A 40 540 104 HOH HOH . J 5 HOH A 41 541 94 HOH HOH . J 5 HOH A 42 542 109 HOH HOH . J 5 HOH A 43 543 82 HOH HOH . J 5 HOH A 44 544 60 HOH HOH . J 5 HOH A 45 545 95 HOH HOH . J 5 HOH A 46 546 6 HOH HOH . J 5 HOH A 47 547 111 HOH HOH . J 5 HOH A 48 548 1 HOH HOH . J 5 HOH A 49 549 2 HOH HOH . J 5 HOH A 50 550 3 HOH HOH . J 5 HOH A 51 551 4 HOH HOH . J 5 HOH A 52 552 5 HOH HOH . J 5 HOH A 53 553 7 HOH HOH . J 5 HOH A 54 554 10 HOH HOH . J 5 HOH A 55 555 11 HOH HOH . J 5 HOH A 56 556 13 HOH HOH . J 5 HOH A 57 557 14 HOH HOH . J 5 HOH A 58 558 15 HOH HOH . J 5 HOH A 59 559 16 HOH HOH . J 5 HOH A 60 560 17 HOH HOH . J 5 HOH A 61 561 18 HOH HOH . J 5 HOH A 62 562 20 HOH HOH . J 5 HOH A 63 563 21 HOH HOH . J 5 HOH A 64 564 23 HOH HOH . J 5 HOH A 65 565 24 HOH HOH . J 5 HOH A 66 566 27 HOH HOH . J 5 HOH A 67 567 28 HOH HOH . J 5 HOH A 68 568 29 HOH HOH . J 5 HOH A 69 569 33 HOH HOH . J 5 HOH A 70 570 35 HOH HOH . J 5 HOH A 71 571 37 HOH HOH . J 5 HOH A 72 572 40 HOH HOH . J 5 HOH A 73 573 41 HOH HOH . J 5 HOH A 74 574 42 HOH HOH . J 5 HOH A 75 575 43 HOH HOH . J 5 HOH A 76 576 44 HOH HOH . J 5 HOH A 77 577 45 HOH HOH . J 5 HOH A 78 578 46 HOH HOH . J 5 HOH A 79 579 47 HOH HOH . J 5 HOH A 80 580 48 HOH HOH . J 5 HOH A 81 581 49 HOH HOH . J 5 HOH A 82 582 50 HOH HOH . J 5 HOH A 83 583 51 HOH HOH . J 5 HOH A 84 584 52 HOH HOH . J 5 HOH A 85 585 54 HOH HOH . J 5 HOH A 86 586 55 HOH HOH . J 5 HOH A 87 587 56 HOH HOH . J 5 HOH A 88 588 59 HOH HOH . J 5 HOH A 89 589 61 HOH HOH . J 5 HOH A 90 590 62 HOH HOH . J 5 HOH A 91 591 64 HOH HOH . J 5 HOH A 92 592 66 HOH HOH . J 5 HOH A 93 593 67 HOH HOH . J 5 HOH A 94 594 68 HOH HOH . J 5 HOH A 95 595 70 HOH HOH . J 5 HOH A 96 596 71 HOH HOH . J 5 HOH A 97 597 72 HOH HOH . J 5 HOH A 98 598 73 HOH HOH . J 5 HOH A 99 599 75 HOH HOH . J 5 HOH A 100 600 76 HOH HOH . J 5 HOH A 101 601 77 HOH HOH . J 5 HOH A 102 602 78 HOH HOH . J 5 HOH A 103 603 79 HOH HOH . J 5 HOH A 104 604 81 HOH HOH . J 5 HOH A 105 605 83 HOH HOH . J 5 HOH A 106 606 84 HOH HOH . J 5 HOH A 107 607 85 HOH HOH . J 5 HOH A 108 608 86 HOH HOH . J 5 HOH A 109 609 87 HOH HOH . J 5 HOH A 110 610 88 HOH HOH . J 5 HOH A 111 611 89 HOH HOH . J 5 HOH A 112 612 90 HOH HOH . J 5 HOH A 113 613 93 HOH HOH . J 5 HOH A 114 614 96 HOH HOH . J 5 HOH A 115 615 100 HOH HOH . J 5 HOH A 116 616 102 HOH HOH . J 5 HOH A 117 617 105 HOH HOH . J 5 HOH A 118 618 106 HOH HOH . J 5 HOH A 119 619 107 HOH HOH . J 5 HOH A 120 620 110 HOH HOH . J 5 HOH A 121 621 113 HOH HOH . J 5 HOH A 122 622 114 HOH HOH . J 5 HOH A 123 623 116 HOH HOH . J 5 HOH A 124 624 120 HOH HOH . J 5 HOH A 125 625 122 HOH HOH . J 5 HOH A 126 626 127 HOH HOH . J 5 HOH A 127 627 128 HOH HOH . J 5 HOH A 128 628 129 HOH HOH . J 5 HOH A 129 629 130 HOH HOH . J 5 HOH A 130 630 131 HOH HOH . J 5 HOH A 131 631 132 HOH HOH . J 5 HOH A 132 632 133 HOH HOH . J 5 HOH A 133 633 136 HOH HOH . J 5 HOH A 134 634 137 HOH HOH . J 5 HOH A 135 635 142 HOH HOH . J 5 HOH A 136 636 144 HOH HOH . J 5 HOH A 137 637 145 HOH HOH . J 5 HOH A 138 638 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 -7.432 6.286 -25.827 1 23.64 ? C1 CIT 401 A 1 HETATM 2 O O1 CIT . . . B 2 -7.07 6.209 -27.02 1 24.04 ? O1 CIT 401 A 1 HETATM 3 O O2 CIT . . . B 2 -7.979 5.301 -25.301 1 24.3 ? O2 CIT 401 A 1 HETATM 4 C C2 CIT . . . B 2 -7.224 7.567 -25.058 1 21.72 ? C2 CIT 401 A 1 HETATM 5 C C3 CIT . . . B 2 -6.964 7.366 -23.566 1 18.95 ? C3 CIT 401 A 1 HETATM 6 O O7 CIT . . . B 2 -6.433 8.631 -23.094 1 17.78 ? O7 CIT 401 A 1 HETATM 7 C C4 CIT . . . B 2 -5.977 6.235 -23.306 1 15.21 ? C4 CIT 401 A 1 HETATM 8 C C5 CIT . . . B 2 -5.367 6.39 -21.933 1 14.98 ? C5 CIT 401 A 1 HETATM 9 O O3 CIT . . . B 2 -4.174 6.775 -21.796 1 15.14 ? O3 CIT 401 A 1 HETATM 10 O O4 CIT . . . B 2 -6.054 6.134 -20.91 1 14.86 ? O4 CIT 401 A 1 HETATM 11 C C6 CIT . . . B 2 -8.223 7.003 -22.782 1 22.12 ? C6 CIT 401 A 1 HETATM 12 O O5 CIT . . . B 2 -8.929 6.039 -23.145 1 26.75 ? O5 CIT 401 A 1 HETATM 13 O O6 CIT . . . B 2 -8.548 7.66 -21.748 1 19.79 ? O6 CIT 401 A 1 HETATM 14 H H21 CIT . . . B 2 -8.107 8.196 -25.178 1 26.06 ? H21 CIT 401 A 1 HETATM 15 H H22 CIT . . . B 2 -6.382 8.105 -25.492 1 26.06 ? H22 CIT 401 A 1 HETATM 16 H HO7 CIT . . . B 2 -7.001 8.975 -22.374 1 21.34 ? HO7 CIT 401 A 1 HETATM 17 H H41 CIT . . . B 2 -5.191 6.252 -24.061 1 18.26 ? H41 CIT 401 A 1 HETATM 18 H H42 CIT . . . B 2 -6.491 5.276 -23.374 1 18.26 ? H42 CIT 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 18 #