data_4WD4
#
_model_server_result.job_id            JJBrrHlrmBEL3DdIRMLVFA 
_model_server_result.datetime_utc      '2024-12-26 22:57:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wd4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":302}' 
#
_entry.id    4WD4 
#
_exptl.entry_id    4WD4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.09 
_cell.angle_gamma         90 
_cell.entry_id            4WD4 
_cell.length_a            74.08 
_cell.length_b            54.41 
_cell.length_c            122.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WD4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 J N N 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 70 n n 
N1 C6 EPE sing 71 n n 
N1 C9 EPE sing 72 n n 
C2 C3 EPE sing 73 n n 
C2 H21 EPE sing 74 n n 
C2 H22 EPE sing 75 n n 
C3 N4 EPE sing 76 n n 
C3 H31 EPE sing 77 n n 
C3 H32 EPE sing 78 n n 
N4 C5 EPE sing 79 n n 
N4 C7 EPE sing 80 n n 
C5 C6 EPE sing 81 n n 
C5 H51 EPE sing 82 n n 
C5 H52 EPE sing 83 n n 
C6 H61 EPE sing 84 n n 
C6 H62 EPE sing 85 n n 
C7 C8 EPE sing 86 n n 
C7 H71 EPE sing 87 n n 
C7 H72 EPE sing 88 n n 
C8 O8 EPE sing 89 n n 
C8 H81 EPE sing 90 n n 
C8 H82 EPE sing 91 n n 
O8 HO8 EPE sing 92 n n 
C9 C10 EPE sing 93 n n 
C9 H91 EPE sing 94 n n 
C9 H92 EPE sing 95 n n 
C10 S EPE sing 96 n n 
C10 H101 EPE sing 97 n n 
C10 H102 EPE sing 98 n n 
S O1S EPE doub 99 n n 
S O2S EPE doub 100 n n 
S O3S EPE sing 101 n n 
O3S HOS3 EPE sing 102 n n 
#
_atom_sites.entry_id                     4WD4 
_atom_sites.fract_transf_matrix[1][1]    0.013499 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00216 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008282 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 300 300 HEM HEM . 
F 2 HEM B 1 301 300 HEM HEM . 
G 3 EPE B 1 302 1 EPE EPE . 
H 2 HEM C 1 300 300 HEM HEM . 
I 2 HEM D 1 301 300 HEM HEM . 
J 3 EPE D 1 302 2 EPE EPE . 
K 4 HOH A 1 401 6 HOH HOH . 
K 4 HOH A 2 402 7 HOH HOH . 
K 4 HOH A 3 403 17 HOH HOH . 
K 4 HOH A 4 404 18 HOH HOH . 
K 4 HOH A 5 405 19 HOH HOH . 
K 4 HOH A 6 406 23 HOH HOH . 
L 4 HOH B 1 401 1 HOH HOH . 
L 4 HOH B 2 402 15 HOH HOH . 
L 4 HOH B 3 403 20 HOH HOH . 
L 4 HOH B 4 404 22 HOH HOH . 
M 4 HOH C 1 401 8 HOH HOH . 
M 4 HOH C 2 402 9 HOH HOH . 
M 4 HOH C 3 403 11 HOH HOH . 
M 4 HOH C 4 404 12 HOH HOH . 
M 4 HOH C 5 405 13 HOH HOH . 
M 4 HOH C 6 406 16 HOH HOH . 
N 4 HOH D 1 401 3 HOH HOH . 
N 4 HOH D 2 402 4 HOH HOH . 
N 4 HOH D 3 403 2 HOH HOH . 
N 4 HOH D 4 404 5 HOH HOH . 
N 4 HOH D 5 405 10 HOH HOH . 
N 4 HOH D 6 406 14 HOH HOH . 
N 4 HOH D 7 407 21 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . J 3 34.218 36.761 125.646 1 52.06 ? N1 EPE 302 D 1 
HETATM 2 C C2 EPE . . . J 3 35.27 36.773 126.669 1 53.29 ? C2 EPE 302 D 1 
HETATM 3 C C3 EPE . . . J 3 35.435 35.4 127.324 1 55.89 ? C3 EPE 302 D 1 
HETATM 4 N N4 EPE . . . J 3 35.458 34.281 126.339 1 56.64 ? N4 EPE 302 D 1 
HETATM 5 C C5 EPE . . . J 3 34.244 34.289 125.466 1 53.51 ? C5 EPE 302 D 1 
HETATM 6 C C6 EPE . . . J 3 33.377 35.53 125.68 1 52.05 ? C6 EPE 302 D 1 
HETATM 7 C C7 EPE . . . J 3 36.76 34.204 125.603 1 54.47 ? C7 EPE 302 D 1 
HETATM 8 C C8 EPE . . . J 3 37.684 33.124 126.171 1 53.68 ? C8 EPE 302 D 1 
HETATM 9 O O8 EPE . . . J 3 37.564 31.908 125.409 1 51.86 ? O8 EPE 302 D 1 
HETATM 10 C C9 EPE . . . J 3 33.432 37.973 125.835 1 51.78 ? C9 EPE 302 D 1 
HETATM 11 C C10 EPE . . . J 3 32.196 37.909 124.952 1 52.99 ? C10 EPE 302 D 1 
HETATM 12 S S EPE . . . J 3 31.494 39.401 124.925 1 57.99 ? S EPE 302 D 1 
HETATM 13 O O1S EPE . . . J 3 30.04 39.108 124.887 1 54.37 ? O1S EPE 302 D 1 
HETATM 14 O O2S EPE . . . J 3 31.866 40.216 123.724 1 56.02 ? O2S EPE 302 D 1 
HETATM 15 O O3S EPE . . . J 3 31.93 40.15 126.136 1 48.34 ? O3S EPE 302 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           15 
#