data_4WDH # _model_server_result.job_id EkwzExaw6wXGYBdlUDOiaA _model_server_result.datetime_utc '2024-12-04 07:28:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wdh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4WDH # _exptl.entry_id 4WDH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.52 _cell.angle_gamma 90 _cell.entry_id 4WDH _cell.length_a 39.31 _cell.length_b 48.33 _cell.length_c 54.03 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WDH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 4WDH _atom_sites.fract_transf_matrix[1][1] 0.025439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002009 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACY A 1 401 1 ACY ACY . C 3 CL A 1 402 1 CL CL . D 3 CL A 1 403 2 CL CL . E 4 HOH A 1 501 89 HOH HOH . E 4 HOH A 2 502 77 HOH HOH . E 4 HOH A 3 503 21 HOH HOH . E 4 HOH A 4 504 113 HOH HOH . E 4 HOH A 5 505 153 HOH HOH . E 4 HOH A 6 506 16 HOH HOH . E 4 HOH A 7 507 1 HOH HOH . E 4 HOH A 8 508 137 HOH HOH . E 4 HOH A 9 509 20 HOH HOH . E 4 HOH A 10 510 31 HOH HOH . E 4 HOH A 11 511 12 HOH HOH . E 4 HOH A 12 512 43 HOH HOH . E 4 HOH A 13 513 118 HOH HOH . E 4 HOH A 14 514 117 HOH HOH . E 4 HOH A 15 515 28 HOH HOH . E 4 HOH A 16 516 27 HOH HOH . E 4 HOH A 17 517 84 HOH HOH . E 4 HOH A 18 518 122 HOH HOH . E 4 HOH A 19 519 23 HOH HOH . E 4 HOH A 20 520 5 HOH HOH . E 4 HOH A 21 521 100 HOH HOH . E 4 HOH A 22 522 51 HOH HOH . E 4 HOH A 23 523 52 HOH HOH . E 4 HOH A 24 524 49 HOH HOH . E 4 HOH A 25 525 44 HOH HOH . E 4 HOH A 26 526 121 HOH HOH . E 4 HOH A 27 527 41 HOH HOH . E 4 HOH A 28 528 146 HOH HOH . E 4 HOH A 29 529 106 HOH HOH . E 4 HOH A 30 530 107 HOH HOH . E 4 HOH A 31 531 115 HOH HOH . E 4 HOH A 32 532 34 HOH HOH . E 4 HOH A 33 533 33 HOH HOH . E 4 HOH A 34 534 22 HOH HOH . E 4 HOH A 35 535 36 HOH HOH . E 4 HOH A 36 536 128 HOH HOH . E 4 HOH A 37 537 55 HOH HOH . E 4 HOH A 38 538 142 HOH HOH . E 4 HOH A 39 539 35 HOH HOH . E 4 HOH A 40 540 91 HOH HOH . E 4 HOH A 41 541 38 HOH HOH . E 4 HOH A 42 542 50 HOH HOH . E 4 HOH A 43 543 90 HOH HOH . E 4 HOH A 44 544 45 HOH HOH . E 4 HOH A 45 545 119 HOH HOH . E 4 HOH A 46 546 92 HOH HOH . E 4 HOH A 47 547 126 HOH HOH . E 4 HOH A 48 548 108 HOH HOH . E 4 HOH A 49 549 60 HOH HOH . E 4 HOH A 50 550 97 HOH HOH . E 4 HOH A 51 551 68 HOH HOH . E 4 HOH A 52 552 154 HOH HOH . E 4 HOH A 53 553 136 HOH HOH . E 4 HOH A 54 554 129 HOH HOH . E 4 HOH A 55 555 139 HOH HOH . E 4 HOH A 56 556 42 HOH HOH . E 4 HOH A 57 557 63 HOH HOH . E 4 HOH A 58 558 53 HOH HOH . E 4 HOH A 59 559 87 HOH HOH . E 4 HOH A 60 560 37 HOH HOH . E 4 HOH A 61 561 144 HOH HOH . E 4 HOH A 62 562 147 HOH HOH . E 4 HOH A 63 563 83 HOH HOH . E 4 HOH A 64 564 65 HOH HOH . E 4 HOH A 65 565 135 HOH HOH . E 4 HOH A 66 566 125 HOH HOH . E 4 HOH A 67 567 123 HOH HOH . E 4 HOH A 68 568 143 HOH HOH . E 4 HOH A 69 569 130 HOH HOH . E 4 HOH A 70 570 2 HOH HOH . E 4 HOH A 71 571 3 HOH HOH . E 4 HOH A 72 572 4 HOH HOH . E 4 HOH A 73 573 6 HOH HOH . E 4 HOH A 74 574 7 HOH HOH . E 4 HOH A 75 575 8 HOH HOH . E 4 HOH A 76 576 9 HOH HOH . E 4 HOH A 77 577 10 HOH HOH . E 4 HOH A 78 578 11 HOH HOH . E 4 HOH A 79 579 13 HOH HOH . E 4 HOH A 80 580 14 HOH HOH . E 4 HOH A 81 581 15 HOH HOH . E 4 HOH A 82 582 17 HOH HOH . E 4 HOH A 83 583 18 HOH HOH . E 4 HOH A 84 584 19 HOH HOH . E 4 HOH A 85 585 24 HOH HOH . E 4 HOH A 86 586 25 HOH HOH . E 4 HOH A 87 587 26 HOH HOH . E 4 HOH A 88 588 29 HOH HOH . E 4 HOH A 89 589 30 HOH HOH . E 4 HOH A 90 590 32 HOH HOH . E 4 HOH A 91 591 39 HOH HOH . E 4 HOH A 92 592 40 HOH HOH . E 4 HOH A 93 593 46 HOH HOH . E 4 HOH A 94 594 47 HOH HOH . E 4 HOH A 95 595 48 HOH HOH . E 4 HOH A 96 596 54 HOH HOH . E 4 HOH A 97 597 56 HOH HOH . E 4 HOH A 98 598 57 HOH HOH . E 4 HOH A 99 599 58 HOH HOH . E 4 HOH A 100 600 59 HOH HOH . E 4 HOH A 101 601 61 HOH HOH . E 4 HOH A 102 602 62 HOH HOH . E 4 HOH A 103 603 64 HOH HOH . E 4 HOH A 104 604 66 HOH HOH . E 4 HOH A 105 605 67 HOH HOH . E 4 HOH A 106 606 69 HOH HOH . E 4 HOH A 107 607 70 HOH HOH . E 4 HOH A 108 608 71 HOH HOH . E 4 HOH A 109 609 72 HOH HOH . E 4 HOH A 110 610 73 HOH HOH . E 4 HOH A 111 611 75 HOH HOH . E 4 HOH A 112 612 76 HOH HOH . E 4 HOH A 113 613 78 HOH HOH . E 4 HOH A 114 614 79 HOH HOH . E 4 HOH A 115 615 80 HOH HOH . E 4 HOH A 116 616 81 HOH HOH . E 4 HOH A 117 617 82 HOH HOH . E 4 HOH A 118 618 85 HOH HOH . E 4 HOH A 119 619 86 HOH HOH . E 4 HOH A 120 620 88 HOH HOH . E 4 HOH A 121 621 93 HOH HOH . E 4 HOH A 122 622 94 HOH HOH . E 4 HOH A 123 623 95 HOH HOH . E 4 HOH A 124 624 96 HOH HOH . E 4 HOH A 125 625 98 HOH HOH . E 4 HOH A 126 626 99 HOH HOH . E 4 HOH A 127 627 101 HOH HOH . E 4 HOH A 128 628 102 HOH HOH . E 4 HOH A 129 629 103 HOH HOH . E 4 HOH A 130 630 104 HOH HOH . E 4 HOH A 131 631 105 HOH HOH . E 4 HOH A 132 632 109 HOH HOH . E 4 HOH A 133 633 110 HOH HOH . E 4 HOH A 134 634 111 HOH HOH . E 4 HOH A 135 635 112 HOH HOH . E 4 HOH A 136 636 114 HOH HOH . E 4 HOH A 137 637 116 HOH HOH . E 4 HOH A 138 638 120 HOH HOH . E 4 HOH A 139 639 124 HOH HOH . E 4 HOH A 140 640 127 HOH HOH . E 4 HOH A 141 641 131 HOH HOH . E 4 HOH A 142 642 132 HOH HOH . E 4 HOH A 143 643 133 HOH HOH . E 4 HOH A 144 644 134 HOH HOH . E 4 HOH A 145 645 138 HOH HOH . E 4 HOH A 146 646 140 HOH HOH . E 4 HOH A 147 647 141 HOH HOH . E 4 HOH A 148 648 145 HOH HOH . E 4 HOH A 149 649 148 HOH HOH . E 4 HOH A 150 650 149 HOH HOH . E 4 HOH A 151 651 150 HOH HOH . E 4 HOH A 152 652 151 HOH HOH . E 4 HOH A 153 653 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . B 2 53.417 7.491 13.669 1 40.08 ? C ACY 401 A 1 HETATM 2 O O ACY . . . B 2 52.454 7.732 12.908 1 42.86 ? O ACY 401 A 1 HETATM 3 O OXT ACY . . . B 2 53.377 6.658 14.598 1 41.78 ? OXT ACY 401 A 1 HETATM 4 C CH3 ACY . . . B 2 54.695 8.252 13.46 1 40.48 ? CH3 ACY 401 A 1 HETATM 5 H H1 ACY . . . B 2 54.534 9.033 12.717 1 48.58 ? H1 ACY 401 A 1 HETATM 6 H H2 ACY . . . B 2 55.009 8.702 14.402 1 48.58 ? H2 ACY 401 A 1 HETATM 7 H H3 ACY . . . B 2 55.468 7.571 13.105 1 48.58 ? H3 ACY 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #