data_4WDW
#
_model_server_result.job_id            1UR5DAzxZuds09uzYAKYmg 
_model_server_result.datetime_utc      '2024-12-25 04:13:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wdw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4WDW 
#
_exptl.entry_id    4WDW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              240.3 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6-dihydropyridin-1(2H)-yl(5-methyl-1H-indol-2-yl)methanone 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         81.03 
_cell.angle_beta          69.72 
_cell.angle_gamma         79.11 
_cell.entry_id            4WDW 
_cell.length_a            55.129 
_cell.length_b            57.917 
_cell.length_c            60.333 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WDW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C15 H16 N2 O' 
_chem_comp.formula_weight    240.3 
_chem_comp.id                WDW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6-dihydropyridin-1(2H)-yl(5-methyl-1H-indol-2-yl)methanone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 C4 WDW sing 456 n n 
C3 C2 WDW sing 457 n n 
C4 C5 WDW doub 458 n n 
C2 N1 WDW sing 459 n n 
C5 C6 WDW sing 460 n n 
N1 C6 WDW sing 461 n n 
N1 C16 WDW sing 462 n n 
O18 C16 WDW doub 463 n n 
C16 C13 WDW sing 464 n n 
C13 N9 WDW sing 465 n y 
C13 C11 WDW doub 466 n y 
N9 C7 WDW sing 467 n y 
C11 C8 WDW sing 468 n y 
C7 C10 WDW sing 469 n y 
C7 C8 WDW doub 470 n y 
C10 C14 WDW doub 471 n y 
C8 C12 WDW sing 472 n y 
C14 C15 WDW sing 473 n y 
C12 C15 WDW doub 474 n y 
C15 C17 WDW sing 475 n n 
C14 H1 WDW sing 476 n n 
C10 H2 WDW sing 477 n n 
C12 H3 WDW sing 478 n n 
C11 H4 WDW sing 479 n n 
C4 H5 WDW sing 480 n n 
C5 H6 WDW sing 481 n n 
C3 H7 WDW sing 482 n n 
C3 H8 WDW sing 483 n n 
C6 H9 WDW sing 484 n n 
C6 H10 WDW sing 485 n n 
C2 H11 WDW sing 486 n n 
C2 H12 WDW sing 487 n n 
C17 H13 WDW sing 488 n n 
C17 H14 WDW sing 489 n n 
C17 H15 WDW sing 490 n n 
N9 H16 WDW sing 491 n n 
#
_atom_sites.entry_id                     4WDW 
_atom_sites.fract_transf_matrix[1][1]    0.018139 
_atom_sites.fract_transf_matrix[1][2]    -0.003491 
_atom_sites.fract_transf_matrix[1][3]    -0.006392 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017583 
_atom_sites.fract_transf_matrix[2][3]    -0.001735 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017756 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 401 1 NAP NAP . 
D 3 WDW A 1 402 1 WDW UNL . 
E 2 NAP B 1 401 1 NAP NAP . 
F 3 WDW B 1 402 1 WDW UNL . 
G 4 HOH A 1 501 136 HOH HOH . 
G 4 HOH A 2 502 118 HOH HOH . 
G 4 HOH A 3 503 100 HOH HOH . 
G 4 HOH A 4 504 30 HOH HOH . 
G 4 HOH A 5 505 141 HOH HOH . 
G 4 HOH A 6 506 137 HOH HOH . 
G 4 HOH A 7 507 104 HOH HOH . 
G 4 HOH A 8 508 34 HOH HOH . 
G 4 HOH A 9 509 24 HOH HOH . 
G 4 HOH A 10 510 19 HOH HOH . 
G 4 HOH A 11 511 65 HOH HOH . 
G 4 HOH A 12 512 50 HOH HOH . 
G 4 HOH A 13 513 62 HOH HOH . 
G 4 HOH A 14 514 1 HOH HOH . 
G 4 HOH A 15 515 3 HOH HOH . 
G 4 HOH A 16 516 8 HOH HOH . 
G 4 HOH A 17 517 9 HOH HOH . 
G 4 HOH A 18 518 11 HOH HOH . 
G 4 HOH A 19 519 12 HOH HOH . 
G 4 HOH A 20 520 13 HOH HOH . 
G 4 HOH A 21 521 17 HOH HOH . 
G 4 HOH A 22 522 20 HOH HOH . 
G 4 HOH A 23 523 21 HOH HOH . 
G 4 HOH A 24 524 25 HOH HOH . 
G 4 HOH A 25 525 26 HOH HOH . 
G 4 HOH A 26 526 27 HOH HOH . 
G 4 HOH A 27 527 28 HOH HOH . 
G 4 HOH A 28 528 35 HOH HOH . 
G 4 HOH A 29 529 36 HOH HOH . 
G 4 HOH A 30 530 37 HOH HOH . 
G 4 HOH A 31 531 39 HOH HOH . 
G 4 HOH A 32 532 40 HOH HOH . 
G 4 HOH A 33 533 41 HOH HOH . 
G 4 HOH A 34 534 42 HOH HOH . 
G 4 HOH A 35 535 43 HOH HOH . 
G 4 HOH A 36 536 44 HOH HOH . 
G 4 HOH A 37 537 45 HOH HOH . 
G 4 HOH A 38 538 47 HOH HOH . 
G 4 HOH A 39 539 48 HOH HOH . 
G 4 HOH A 40 540 52 HOH HOH . 
G 4 HOH A 41 541 53 HOH HOH . 
G 4 HOH A 42 542 59 HOH HOH . 
G 4 HOH A 43 543 68 HOH HOH . 
G 4 HOH A 44 544 69 HOH HOH . 
G 4 HOH A 45 545 70 HOH HOH . 
G 4 HOH A 46 546 72 HOH HOH . 
G 4 HOH A 47 547 73 HOH HOH . 
G 4 HOH A 48 548 74 HOH HOH . 
G 4 HOH A 49 549 75 HOH HOH . 
G 4 HOH A 50 550 76 HOH HOH . 
G 4 HOH A 51 551 77 HOH HOH . 
G 4 HOH A 52 552 78 HOH HOH . 
G 4 HOH A 53 553 86 HOH HOH . 
G 4 HOH A 54 554 88 HOH HOH . 
G 4 HOH A 55 555 91 HOH HOH . 
G 4 HOH A 56 556 93 HOH HOH . 
G 4 HOH A 57 557 94 HOH HOH . 
G 4 HOH A 58 558 97 HOH HOH . 
G 4 HOH A 59 559 99 HOH HOH . 
G 4 HOH A 60 560 102 HOH HOH . 
G 4 HOH A 61 561 103 HOH HOH . 
G 4 HOH A 62 562 106 HOH HOH . 
G 4 HOH A 63 563 109 HOH HOH . 
G 4 HOH A 64 564 110 HOH HOH . 
G 4 HOH A 65 565 119 HOH HOH . 
G 4 HOH A 66 566 121 HOH HOH . 
G 4 HOH A 67 567 123 HOH HOH . 
G 4 HOH A 68 568 128 HOH HOH . 
G 4 HOH A 69 569 129 HOH HOH . 
G 4 HOH A 70 570 131 HOH HOH . 
G 4 HOH A 71 571 132 HOH HOH . 
G 4 HOH A 72 572 139 HOH HOH . 
G 4 HOH A 73 573 143 HOH HOH . 
G 4 HOH A 74 574 144 HOH HOH . 
H 4 HOH B 1 501 63 HOH HOH . 
H 4 HOH B 2 502 54 HOH HOH . 
H 4 HOH B 3 503 82 HOH HOH . 
H 4 HOH B 4 504 84 HOH HOH . 
H 4 HOH B 5 505 85 HOH HOH . 
H 4 HOH B 6 506 56 HOH HOH . 
H 4 HOH B 7 507 122 HOH HOH . 
H 4 HOH B 8 508 2 HOH HOH . 
H 4 HOH B 9 509 4 HOH HOH . 
H 4 HOH B 10 510 5 HOH HOH . 
H 4 HOH B 11 511 6 HOH HOH . 
H 4 HOH B 12 512 7 HOH HOH . 
H 4 HOH B 13 513 10 HOH HOH . 
H 4 HOH B 14 514 14 HOH HOH . 
H 4 HOH B 15 515 15 HOH HOH . 
H 4 HOH B 16 516 16 HOH HOH . 
H 4 HOH B 17 517 18 HOH HOH . 
H 4 HOH B 18 518 22 HOH HOH . 
H 4 HOH B 19 519 23 HOH HOH . 
H 4 HOH B 20 520 29 HOH HOH . 
H 4 HOH B 21 521 31 HOH HOH . 
H 4 HOH B 22 522 32 HOH HOH . 
H 4 HOH B 23 523 33 HOH HOH . 
H 4 HOH B 24 524 38 HOH HOH . 
H 4 HOH B 25 525 46 HOH HOH . 
H 4 HOH B 26 526 49 HOH HOH . 
H 4 HOH B 27 527 51 HOH HOH . 
H 4 HOH B 28 528 55 HOH HOH . 
H 4 HOH B 29 529 57 HOH HOH . 
H 4 HOH B 30 530 58 HOH HOH . 
H 4 HOH B 31 531 60 HOH HOH . 
H 4 HOH B 32 532 61 HOH HOH . 
H 4 HOH B 33 533 64 HOH HOH . 
H 4 HOH B 34 534 66 HOH HOH . 
H 4 HOH B 35 535 67 HOH HOH . 
H 4 HOH B 36 536 71 HOH HOH . 
H 4 HOH B 37 537 79 HOH HOH . 
H 4 HOH B 38 538 80 HOH HOH . 
H 4 HOH B 39 539 81 HOH HOH . 
H 4 HOH B 40 540 83 HOH HOH . 
H 4 HOH B 41 541 87 HOH HOH . 
H 4 HOH B 42 542 89 HOH HOH . 
H 4 HOH B 43 543 90 HOH HOH . 
H 4 HOH B 44 544 92 HOH HOH . 
H 4 HOH B 45 545 95 HOH HOH . 
H 4 HOH B 46 546 96 HOH HOH . 
H 4 HOH B 47 547 98 HOH HOH . 
H 4 HOH B 48 548 101 HOH HOH . 
H 4 HOH B 49 549 105 HOH HOH . 
H 4 HOH B 50 550 107 HOH HOH . 
H 4 HOH B 51 551 108 HOH HOH . 
H 4 HOH B 52 552 111 HOH HOH . 
H 4 HOH B 53 553 112 HOH HOH . 
H 4 HOH B 54 554 113 HOH HOH . 
H 4 HOH B 55 555 114 HOH HOH . 
H 4 HOH B 56 556 115 HOH HOH . 
H 4 HOH B 57 557 116 HOH HOH . 
H 4 HOH B 58 558 117 HOH HOH . 
H 4 HOH B 59 559 120 HOH HOH . 
H 4 HOH B 60 560 124 HOH HOH . 
H 4 HOH B 61 561 125 HOH HOH . 
H 4 HOH B 62 562 126 HOH HOH . 
H 4 HOH B 63 563 127 HOH HOH . 
H 4 HOH B 64 564 130 HOH HOH . 
H 4 HOH B 65 565 133 HOH HOH . 
H 4 HOH B 66 566 134 HOH HOH . 
H 4 HOH B 67 567 135 HOH HOH . 
H 4 HOH B 68 568 138 HOH HOH . 
H 4 HOH B 69 569 140 HOH HOH . 
H 4 HOH B 70 570 142 HOH HOH . 
H 4 HOH B 71 571 145 HOH HOH . 
H 4 HOH B 72 572 146 HOH HOH . 
H 4 HOH B 73 573 147 HOH HOH . 
H 4 HOH B 74 574 148 HOH HOH . 
H 4 HOH B 75 575 149 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C14 WDW . . . D 3 -11.355 17.024 25.155 1 61.73 ? C14 WDW 402 A 1 
HETATM 2 C C10 WDW . . . D 3 -10.88 16.763 23.891 1 60.29 ? C10 WDW 402 A 1 
HETATM 3 C C12 WDW . . . D 3 -12.641 14.982 25.229 1 63.5 ? C12 WDW 402 A 1 
HETATM 4 C C11 WDW . . . D 3 -12.402 13.6 23.037 1 63.04 ? C11 WDW 402 A 1 
HETATM 5 C C8 WDW . . . D 3 -12.19 14.683 23.95 1 66.04 ? C8 WDW 402 A 1 
HETATM 6 C C15 WDW . . . D 3 -12.211 16.164 25.805 1 65.75 ? C15 WDW 402 A 1 
HETATM 7 C C7 WDW . . . D 3 -11.331 15.581 23.331 1 64.58 ? C7 WDW 402 A 1 
HETATM 8 C C13 WDW . . . D 3 -11.685 13.857 21.881 1 55.28 ? C13 WDW 402 A 1 
HETATM 9 C C4 WDW . . . D 3 -14.296 12.709 17.901 1 63.43 ? C4 WDW 402 A 1 
HETATM 10 C C5 WDW . . . D 3 -14.642 12.985 19.171 1 65.7 ? C5 WDW 402 A 1 
HETATM 11 C C16 WDW . . . D 3 -11.457 13.159 20.652 1 46.63 ? C16 WDW 402 A 1 
HETATM 12 C C3 WDW . . . D 3 -13.07 11.923 17.536 1 56.55 ? C3 WDW 402 A 1 
HETATM 13 C C6 WDW . . . D 3 -13.854 12.52 20.361 1 59.18 ? C6 WDW 402 A 1 
HETATM 14 C C2 WDW . . . D 3 -12.08 11.806 18.707 1 47.87 ? C2 WDW 402 A 1 
HETATM 15 C C17 WDW . . . D 3 -12.678 16.531 27.171 1 65.07 ? C17 WDW 402 A 1 
HETATM 16 N N9 WDW . . . D 3 -11.056 15.052 22.099 1 56.4 ? N9 WDW 402 A 1 
HETATM 17 N N1 WDW . . . D 3 -12.454 12.487 19.967 1 53.81 ? N1 WDW 402 A 1 
HETATM 18 O O18 WDW . . . D 3 -10.298 13.178 20.246 1 38.98 ? O18 WDW 402 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#