data_4WER
#
_model_server_result.job_id            8bw_R0JfSUVdnR36v6P3kA 
_model_server_result.datetime_utc      '2025-07-30 16:06:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wer 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    4WER 
#
_exptl.entry_id    4WER 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4WER 
_cell.length_a            65.271 
_cell.length_b            103.157 
_cell.length_c            44.478 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WER 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 130.542 103.157 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 A C VAL 66 A VAL 63 1_555 A N MSE 67 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 A C MSE 67 A MSE 64 1_555 A N GLY 68 A GLY 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 A C PRO 107 A PRO 104 1_555 A N MSE 108 A MSE 105 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 A C PRO 107 A PRO 104 1_555 A N MSE 108 A MSE 105 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? 
covale ? covale7 A C PRO 107 A PRO 104 1_555 A N MSE 108 A MSE 105 1_555 ? ? ? ? C ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 108 A MSE 105 1_555 A N ASP 109 A ASP 106 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 A C MSE 108 A MSE 105 1_555 A N ASP 109 A ASP 106 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 A C MSE 108 A MSE 105 1_555 A N ASP 109 A ASP 106 1_555 ? C ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale11 A C PHE 135 A PHE 132 1_555 A N MSE 136 A MSE 133 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.325 ? 
covale ? covale12 A C PHE 135 A PHE 132 1_555 A N MSE 136 A MSE 133 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? 
covale ? covale13 A C MSE 136 A MSE 133 1_555 A N ASN 137 A ASN 134 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale14 A C MSE 136 A MSE 133 1_555 A N ASN 137 A ASN 134 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     4WER 
_atom_sites.fract_transf_matrix[1][1]    0.015321 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009694 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022483 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AMP A 1 401 301 AMP AMP . 
C 3 EDO A 1 402 1 EDO EDO . 
D 4 HOH A 1 501 61 HOH HOH . 
D 4 HOH A 2 502 22 HOH HOH . 
D 4 HOH A 3 503 54 HOH HOH . 
D 4 HOH A 4 504 91 HOH HOH . 
D 4 HOH A 5 505 59 HOH HOH . 
D 4 HOH A 6 506 64 HOH HOH . 
D 4 HOH A 7 507 33 HOH HOH . 
D 4 HOH A 8 508 30 HOH HOH . 
D 4 HOH A 9 509 28 HOH HOH . 
D 4 HOH A 10 510 8 HOH HOH . 
D 4 HOH A 11 511 66 HOH HOH . 
D 4 HOH A 12 512 46 HOH HOH . 
D 4 HOH A 13 513 21 HOH HOH . 
D 4 HOH A 14 514 11 HOH HOH . 
D 4 HOH A 15 515 36 HOH HOH . 
D 4 HOH A 16 516 26 HOH HOH . 
D 4 HOH A 17 517 37 HOH HOH . 
D 4 HOH A 18 518 2 HOH HOH . 
D 4 HOH A 19 519 6 HOH HOH . 
D 4 HOH A 20 520 77 HOH HOH . 
D 4 HOH A 21 521 24 HOH HOH . 
D 4 HOH A 22 522 94 HOH HOH . 
D 4 HOH A 23 523 52 HOH HOH . 
D 4 HOH A 24 524 19 HOH HOH . 
D 4 HOH A 25 525 89 HOH HOH . 
D 4 HOH A 26 526 72 HOH HOH . 
D 4 HOH A 27 527 44 HOH HOH . 
D 4 HOH A 28 528 16 HOH HOH . 
D 4 HOH A 29 529 34 HOH HOH . 
D 4 HOH A 30 530 71 HOH HOH . 
D 4 HOH A 31 531 55 HOH HOH . 
D 4 HOH A 32 532 88 HOH HOH . 
D 4 HOH A 33 533 73 HOH HOH . 
D 4 HOH A 34 534 90 HOH HOH . 
D 4 HOH A 35 535 81 HOH HOH . 
D 4 HOH A 36 536 63 HOH HOH . 
D 4 HOH A 37 537 75 HOH HOH . 
D 4 HOH A 38 538 82 HOH HOH . 
D 4 HOH A 39 539 50 HOH HOH . 
D 4 HOH A 40 540 32 HOH HOH . 
D 4 HOH A 41 541 1 HOH HOH . 
D 4 HOH A 42 542 3 HOH HOH . 
D 4 HOH A 43 543 4 HOH HOH . 
D 4 HOH A 44 544 5 HOH HOH . 
D 4 HOH A 45 545 7 HOH HOH . 
D 4 HOH A 46 546 9 HOH HOH . 
D 4 HOH A 47 547 10 HOH HOH . 
D 4 HOH A 48 548 12 HOH HOH . 
D 4 HOH A 49 549 13 HOH HOH . 
D 4 HOH A 50 550 14 HOH HOH . 
D 4 HOH A 51 551 15 HOH HOH . 
D 4 HOH A 52 552 17 HOH HOH . 
D 4 HOH A 53 553 18 HOH HOH . 
D 4 HOH A 54 554 20 HOH HOH . 
D 4 HOH A 55 555 23 HOH HOH . 
D 4 HOH A 56 556 25 HOH HOH . 
D 4 HOH A 57 557 27 HOH HOH . 
D 4 HOH A 58 558 29 HOH HOH . 
D 4 HOH A 59 559 31 HOH HOH . 
D 4 HOH A 60 560 35 HOH HOH . 
D 4 HOH A 61 561 38 HOH HOH . 
D 4 HOH A 62 562 39 HOH HOH . 
D 4 HOH A 63 563 40 HOH HOH . 
D 4 HOH A 64 564 41 HOH HOH . 
D 4 HOH A 65 565 42 HOH HOH . 
D 4 HOH A 66 566 43 HOH HOH . 
D 4 HOH A 67 567 45 HOH HOH . 
D 4 HOH A 68 568 47 HOH HOH . 
D 4 HOH A 69 569 48 HOH HOH . 
D 4 HOH A 70 570 49 HOH HOH . 
D 4 HOH A 71 571 51 HOH HOH . 
D 4 HOH A 72 572 53 HOH HOH . 
D 4 HOH A 73 573 56 HOH HOH . 
D 4 HOH A 74 574 57 HOH HOH . 
D 4 HOH A 75 575 58 HOH HOH . 
D 4 HOH A 76 576 60 HOH HOH . 
D 4 HOH A 77 577 62 HOH HOH . 
D 4 HOH A 78 578 65 HOH HOH . 
D 4 HOH A 79 579 67 HOH HOH . 
D 4 HOH A 80 580 68 HOH HOH . 
D 4 HOH A 81 581 69 HOH HOH . 
D 4 HOH A 82 582 70 HOH HOH . 
D 4 HOH A 83 583 74 HOH HOH . 
D 4 HOH A 84 584 76 HOH HOH . 
D 4 HOH A 85 585 78 HOH HOH . 
D 4 HOH A 86 586 79 HOH HOH . 
D 4 HOH A 87 587 80 HOH HOH . 
D 4 HOH A 88 588 83 HOH HOH . 
D 4 HOH A 89 589 84 HOH HOH . 
D 4 HOH A 90 590 85 HOH HOH . 
D 4 HOH A 91 591 86 HOH HOH . 
D 4 HOH A 92 592 87 HOH HOH . 
D 4 HOH A 93 593 92 HOH HOH . 
D 4 HOH A 94 594 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . B 2 51.738 39.378 13.526 1 46.56 ? P AMP 401 A 1 
HETATM 2 O O1P AMP . . . B 2 53.129 38.982 13.1 1 47.04 ? O1P AMP 401 A 1 
HETATM 3 O O2P AMP . . . B 2 50.757 38.23 13.512 1 53.36 ? O2P AMP 401 A 1 
HETATM 4 O O3P AMP . . . B 2 51.67 40.255 14.754 1 49.38 ? O3P AMP 401 A 1 
HETATM 5 O O5' AMP . . . B 2 51.258 40.33 12.343 1 39.66 ? O5' AMP 401 A 1 
HETATM 6 C C5' AMP . . . B 2 49.974 40.945 12.361 1 40.57 ? C5' AMP 401 A 1 
HETATM 7 C C4' AMP . . . B 2 49.945 42.185 11.499 1 47.7 ? C4' AMP 401 A 1 
HETATM 8 O O4' AMP . . . B 2 50.244 41.828 10.121 1 46.04 ? O4' AMP 401 A 1 
HETATM 9 C C3' AMP . . . B 2 48.607 42.933 11.475 1 53.67 ? C3' AMP 401 A 1 
HETATM 10 O O3' AMP . . . B 2 48.848 44.337 11.578 1 62.62 ? O3' AMP 401 A 1 
HETATM 11 C C2' AMP . . . B 2 48.041 42.613 10.089 1 45.56 ? C2' AMP 401 A 1 
HETATM 12 O O2' AMP . . . B 2 47.2 43.614 9.558 1 47.29 ? O2' AMP 401 A 1 
HETATM 13 C C1' AMP . . . B 2 49.31 42.445 9.262 1 44.18 ? C1' AMP 401 A 1 
HETATM 14 N N9 AMP . . . B 2 49.154 41.612 8.065 1 43.77 ? N9 AMP 401 A 1 
HETATM 15 C C8 AMP . . . B 2 48.337 40.548 7.921 1 44.44 ? C8 AMP 401 A 1 
HETATM 16 N N7 AMP . . . B 2 48.438 40.012 6.675 1 38.23 ? N7 AMP 401 A 1 
HETATM 17 C C5 AMP . . . B 2 49.335 40.75 5.993 1 40.05 ? C5 AMP 401 A 1 
HETATM 18 C C6 AMP . . . B 2 49.916 40.743 4.627 1 31.08 ? C6 AMP 401 A 1 
HETATM 19 N N6 AMP . . . B 2 49.553 39.811 3.717 1 30.7 ? N6 AMP 401 A 1 
HETATM 20 N N1 AMP . . . B 2 50.826 41.695 4.32 1 31.06 ? N1 AMP 401 A 1 
HETATM 21 C C2 AMP . . . B 2 51.204 42.628 5.214 1 27.67 ? C2 AMP 401 A 1 
HETATM 22 N N3 AMP . . . B 2 50.717 42.698 6.465 1 31.5 ? N3 AMP 401 A 1 
HETATM 23 C C4 AMP . . . B 2 49.796 41.807 6.908 1 39.11 ? C4 AMP 401 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#