data_4WFS # _model_server_result.job_id oSSYqQ_kJ2uGhp8q6iwv9w _model_server_result.datetime_utc '2025-03-06 01:00:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4WFS # _exptl.entry_id 4WFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WFS _cell.length_a 71.57 _cell.length_b 85.26 _cell.length_c 144.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 4WFS _atom_sites.fract_transf_matrix[1][1] 0.013972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006933 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 1 FMN FMN . C 3 SO4 A 1 402 1 SO4 SO4 . D 3 SO4 A 1 403 1 SO4 SO4 . E 3 SO4 A 1 404 1 SO4 SO4 . F 3 SO4 A 1 405 1 SO4 SO4 . G 4 CL A 1 406 1 CL CL . H 5 HOH A 1 501 16 HOH HOH . H 5 HOH A 2 502 19 HOH HOH . H 5 HOH A 3 503 8 HOH HOH . H 5 HOH A 4 504 26 HOH HOH . H 5 HOH A 5 505 25 HOH HOH . H 5 HOH A 6 506 23 HOH HOH . H 5 HOH A 7 507 18 HOH HOH . H 5 HOH A 8 508 20 HOH HOH . H 5 HOH A 9 509 21 HOH HOH . H 5 HOH A 10 510 22 HOH HOH . H 5 HOH A 11 511 1 HOH HOH . H 5 HOH A 12 512 2 HOH HOH . H 5 HOH A 13 513 3 HOH HOH . H 5 HOH A 14 514 4 HOH HOH . H 5 HOH A 15 515 5 HOH HOH . H 5 HOH A 16 516 6 HOH HOH . H 5 HOH A 17 517 7 HOH HOH . H 5 HOH A 18 518 9 HOH HOH . H 5 HOH A 19 519 10 HOH HOH . H 5 HOH A 20 520 11 HOH HOH . H 5 HOH A 21 521 13 HOH HOH . H 5 HOH A 22 522 14 HOH HOH . H 5 HOH A 23 523 15 HOH HOH . H 5 HOH A 24 524 17 HOH HOH . H 5 HOH A 25 525 27 HOH HOH . H 5 HOH A 26 526 29 HOH HOH . H 5 HOH A 27 527 30 HOH HOH . H 5 HOH A 28 528 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . A . B 2 -25.755 -27.376 -22.142 0.56 38.29 ? N1 FMN 401 A 1 HETATM 2 N N1 FMN . B . B 2 -25.629 -27.358 -21.955 0.44 42.48 ? N1 FMN 401 A 1 HETATM 3 C C2 FMN . A . B 2 -24.935 -28.467 -22.086 0.56 39.13 ? C2 FMN 401 A 1 HETATM 4 C C2 FMN . B . B 2 -24.859 -28.492 -21.94 0.44 42.98 ? C2 FMN 401 A 1 HETATM 5 O O2 FMN . A . B 2 -24.735 -29.072 -21.027 0.56 39.96 ? O2 FMN 401 A 1 HETATM 6 O O2 FMN . B . B 2 -24.665 -29.13 -20.901 0.44 43.37 ? O2 FMN 401 A 1 HETATM 7 N N3 FMN . A . B 2 -24.285 -28.9 -23.234 0.56 38.96 ? N3 FMN 401 A 1 HETATM 8 N N3 FMN . B . B 2 -24.272 -28.946 -23.113 0.44 42.87 ? N3 FMN 401 A 1 HETATM 9 C C4 FMN . A . B 2 -24.381 -28.32 -24.488 0.56 38.58 ? C4 FMN 401 A 1 HETATM 10 C C4 FMN . B . B 2 -24.391 -28.358 -24.359 0.44 42.58 ? C4 FMN 401 A 1 HETATM 11 O O4 FMN . A . B 2 -23.679 -28.735 -25.406 0.56 39.16 ? O4 FMN 401 A 1 HETATM 12 O O4 FMN . B . B 2 -23.767 -28.813 -25.313 0.44 43.02 ? O4 FMN 401 A 1 HETATM 13 C C4A FMN . A . B 2 -25.272 -27.163 -24.544 0.56 38.32 ? C4A FMN 401 A 1 HETATM 14 C C4A FMN . B . B 2 -25.226 -27.165 -24.378 0.44 42.45 ? C4A FMN 401 A 1 HETATM 15 N N5 FMN . A . B 2 -25.362 -26.503 -25.675 0.56 38.53 ? N5 FMN 401 A 1 HETATM 16 N N5 FMN . B . B 2 -25.356 -26.518 -25.51 0.44 42.69 ? N5 FMN 401 A 1 HETATM 17 C C5A FMN . A . B 2 -26.006 -25.267 -25.66 0.56 38.04 ? C5A FMN 401 A 1 HETATM 18 C C5A FMN . B . B 2 -26.004 -25.287 -25.488 0.44 42.35 ? C5A FMN 401 A 1 HETATM 19 C C6 FMN . A . B 2 -25.951 -24.468 -26.81 0.56 37.46 ? C6 FMN 401 A 1 HETATM 20 C C6 FMN . B . B 2 -26.018 -24.52 -26.658 0.44 41.8 ? C6 FMN 401 A 1 HETATM 21 C C7 FMN . A . B 2 -26.443 -23.167 -26.815 0.56 36.41 ? C7 FMN 401 A 1 HETATM 22 C C7 FMN . B . B 2 -26.549 -23.236 -26.679 0.44 41.09 ? C7 FMN 401 A 1 HETATM 23 C C7M FMN . A . B 2 -26.336 -22.343 -28.074 0.56 34.99 ? C7M FMN 401 A 1 HETATM 24 C C7M FMN . B . B 2 -26.501 -22.438 -27.959 0.44 40.01 ? C7M FMN 401 A 1 HETATM 25 C C8 FMN . A . B 2 -27.031 -22.648 -25.639 0.56 37.35 ? C8 FMN 401 A 1 HETATM 26 C C8 FMN . B . B 2 -27.11 -22.703 -25.496 0.44 41.74 ? C8 FMN 401 A 1 HETATM 27 C C8M FMN . A . B 2 -27.535 -21.228 -25.567 0.56 37.46 ? C8M FMN 401 A 1 HETATM 28 C C8M FMN . B . B 2 -27.683 -21.308 -25.453 0.44 41.88 ? C8M FMN 401 A 1 HETATM 29 C C9 FMN . A . B 2 -27.116 -23.454 -24.51 0.56 37.35 ? C9 FMN 401 A 1 HETATM 30 C C9 FMN . B . B 2 -27.118 -23.475 -24.34 0.44 41.84 ? C9 FMN 401 A 1 HETATM 31 C C9A FMN . A . B 2 -26.6 -24.75 -24.496 0.56 38.19 ? C9A FMN 401 A 1 HETATM 32 C C9A FMN . B . B 2 -26.562 -24.756 -24.309 0.44 42.54 ? C9A FMN 401 A 1 HETATM 33 N N10 FMN . A . B 2 -26.553 -25.541 -23.317 0.56 38.17 ? N10 FMN 401 A 1 HETATM 34 N N10 FMN . B . B 2 -26.461 -25.527 -23.116 0.44 42.61 ? N10 FMN 401 A 1 HETATM 35 C C10 FMN . A . B 2 -25.896 -26.742 -23.301 0.56 38.25 ? C10 FMN 401 A 1 HETATM 36 C C10 FMN . B . B 2 -25.792 -26.721 -23.11 0.44 42.46 ? C10 FMN 401 A 1 HETATM 37 C C1' FMN . A . B 2 -27.189 -25.054 -22.079 0.56 37.26 ? C1' FMN 401 A 1 HETATM 38 C C1' FMN . B . B 2 -27.113 -25.091 -21.865 0.44 42.59 ? C1' FMN 401 A 1 HETATM 39 C C2' FMN . A . B 2 -26.225 -24.206 -21.256 0.56 36.1 ? C2' FMN 401 A 1 HETATM 40 C C2' FMN . B . B 2 -26.342 -24.03 -21.085 0.44 42.53 ? C2' FMN 401 A 1 HETATM 41 O O2' FMN . A . B 2 -24.97 -24.845 -21.014 0.56 35.29 ? O2' FMN 401 A 1 HETATM 42 O O2' FMN . B . B 2 -25.058 -24.497 -20.667 0.44 42.34 ? O2' FMN 401 A 1 HETATM 43 C C3' FMN . A . B 2 -26.872 -23.849 -19.917 0.56 35.59 ? C3' FMN 401 A 1 HETATM 44 C C3' FMN . B . B 2 -27.117 -23.508 -19.872 0.44 42.82 ? C3' FMN 401 A 1 HETATM 45 O O3' FMN . A . B 2 -27.563 -24.96 -19.359 0.56 35.11 ? O3' FMN 401 A 1 HETATM 46 O O3' FMN . B . B 2 -27.308 -24.524 -18.898 0.44 41.43 ? O3' FMN 401 A 1 HETATM 47 C C4' FMN . A . B 2 -27.819 -22.653 -19.858 0.56 35.57 ? C4' FMN 401 A 1 HETATM 48 C C4' FMN . B . B 2 -28.407 -22.698 -20.016 0.44 44.29 ? C4' FMN 401 A 1 HETATM 49 O O4' FMN . A . B 2 -27.79 -21.89 -21.067 0.56 33.95 ? O4' FMN 401 A 1 HETATM 50 O O4' FMN . B . B 2 -29.298 -23.254 -20.984 0.44 43.34 ? O4' FMN 401 A 1 HETATM 51 C C5' FMN . A . B 2 -27.44 -21.843 -18.647 0.56 35.4 ? C5' FMN 401 A 1 HETATM 52 C C5' FMN . B . B 2 -28.15 -21.228 -20.259 0.44 46.1 ? C5' FMN 401 A 1 HETATM 53 O O5' FMN . A . B 2 -28.3 -20.722 -18.539 0.56 35.72 ? O5' FMN 401 A 1 HETATM 54 O O5' FMN . B . B 2 -27.353 -20.859 -19.115 0.44 47.7 ? O5' FMN 401 A 1 HETATM 55 P P FMN . A . B 2 -27.783 -19.308 -18.898 0.56 35.52 ? P FMN 401 A 1 HETATM 56 P P FMN . B . B 2 -27.095 -19.383 -18.647 0.44 49.82 ? P FMN 401 A 1 HETATM 57 O O1P FMN . A . B 2 -28.828 -18.451 -18.384 0.56 37.43 ? O1P FMN 401 A 1 HETATM 58 O O1P FMN . B . B 2 -28.346 -18.82 -18.095 0.44 51.32 ? O1P FMN 401 A 1 HETATM 59 O O2P FMN . A . B 2 -26.417 -19.054 -18.233 0.56 34.22 ? O2P FMN 401 A 1 HETATM 60 O O2P FMN . B . B 2 -25.962 -19.444 -17.658 0.44 50.18 ? O2P FMN 401 A 1 HETATM 61 O O3P FMN . A . B 2 -27.63 -19.318 -20.421 0.56 32.31 ? O3P FMN 401 A 1 HETATM 62 O O3P FMN . B . B 2 -26.589 -18.655 -19.868 0.44 50.94 ? O3P FMN 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 62 #