data_4WH1 # _model_server_result.job_id m5UifcPxrH8c8zpXzw-9Vg _model_server_result.datetime_utc '2024-11-29 16:50:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4WH1 # _exptl.entry_id 4WH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WH1 _cell.length_a 43.164 _cell.length_b 88.136 _cell.length_c 105.231 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 136 n n C1 C2 GOL sing 137 n n C1 H11 GOL sing 138 n n C1 H12 GOL sing 139 n n O1 HO1 GOL sing 140 n n C2 O2 GOL sing 141 n n C2 C3 GOL sing 142 n n C2 H2 GOL sing 143 n n O2 HO2 GOL sing 144 n n C3 O3 GOL sing 145 n n C3 H31 GOL sing 146 n n C3 H32 GOL sing 147 n n O3 HO3 GOL sing 148 n n # _atom_sites.entry_id 4WH1 _atom_sites.fract_transf_matrix[1][1] 0.023167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011346 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009503 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 1 GOL GOL . C 3 ACY A 1 402 2 ACY ACY . D 4 HOH A 1 501 149 HOH HOH . D 4 HOH A 2 502 58 HOH HOH . D 4 HOH A 3 503 64 HOH HOH . D 4 HOH A 4 504 86 HOH HOH . D 4 HOH A 5 505 55 HOH HOH . D 4 HOH A 6 506 133 HOH HOH . D 4 HOH A 7 507 26 HOH HOH . D 4 HOH A 8 508 56 HOH HOH . D 4 HOH A 9 509 104 HOH HOH . D 4 HOH A 10 510 83 HOH HOH . D 4 HOH A 11 511 85 HOH HOH . D 4 HOH A 12 512 29 HOH HOH . D 4 HOH A 13 513 54 HOH HOH . D 4 HOH A 14 514 108 HOH HOH . D 4 HOH A 15 515 74 HOH HOH . D 4 HOH A 16 516 41 HOH HOH . D 4 HOH A 17 517 30 HOH HOH . D 4 HOH A 18 518 116 HOH HOH . D 4 HOH A 19 519 96 HOH HOH . D 4 HOH A 20 520 59 HOH HOH . D 4 HOH A 21 521 118 HOH HOH . D 4 HOH A 22 522 126 HOH HOH . D 4 HOH A 23 523 120 HOH HOH . D 4 HOH A 24 524 134 HOH HOH . D 4 HOH A 25 525 117 HOH HOH . D 4 HOH A 26 526 1 HOH HOH . D 4 HOH A 27 527 2 HOH HOH . D 4 HOH A 28 528 3 HOH HOH . D 4 HOH A 29 529 4 HOH HOH . D 4 HOH A 30 530 5 HOH HOH . D 4 HOH A 31 531 6 HOH HOH . D 4 HOH A 32 532 7 HOH HOH . D 4 HOH A 33 533 8 HOH HOH . D 4 HOH A 34 534 9 HOH HOH . D 4 HOH A 35 535 10 HOH HOH . D 4 HOH A 36 536 11 HOH HOH . D 4 HOH A 37 537 12 HOH HOH . D 4 HOH A 38 538 13 HOH HOH . D 4 HOH A 39 539 14 HOH HOH . D 4 HOH A 40 540 15 HOH HOH . D 4 HOH A 41 541 16 HOH HOH . D 4 HOH A 42 542 17 HOH HOH . D 4 HOH A 43 543 18 HOH HOH . D 4 HOH A 44 544 19 HOH HOH . D 4 HOH A 45 545 20 HOH HOH . D 4 HOH A 46 546 23 HOH HOH . D 4 HOH A 47 547 24 HOH HOH . D 4 HOH A 48 548 25 HOH HOH . D 4 HOH A 49 549 27 HOH HOH . D 4 HOH A 50 550 28 HOH HOH . D 4 HOH A 51 551 31 HOH HOH . D 4 HOH A 52 552 32 HOH HOH . D 4 HOH A 53 553 35 HOH HOH . D 4 HOH A 54 554 36 HOH HOH . D 4 HOH A 55 555 37 HOH HOH . D 4 HOH A 56 556 39 HOH HOH . D 4 HOH A 57 557 42 HOH HOH . D 4 HOH A 58 558 43 HOH HOH . D 4 HOH A 59 559 44 HOH HOH . D 4 HOH A 60 560 45 HOH HOH . D 4 HOH A 61 561 46 HOH HOH . D 4 HOH A 62 562 47 HOH HOH . D 4 HOH A 63 563 48 HOH HOH . D 4 HOH A 64 564 49 HOH HOH . D 4 HOH A 65 565 50 HOH HOH . D 4 HOH A 66 566 51 HOH HOH . D 4 HOH A 67 567 52 HOH HOH . D 4 HOH A 68 568 53 HOH HOH . D 4 HOH A 69 569 57 HOH HOH . D 4 HOH A 70 570 60 HOH HOH . D 4 HOH A 71 571 61 HOH HOH . D 4 HOH A 72 572 62 HOH HOH . D 4 HOH A 73 573 63 HOH HOH . D 4 HOH A 74 574 65 HOH HOH . D 4 HOH A 75 575 66 HOH HOH . D 4 HOH A 76 576 67 HOH HOH . D 4 HOH A 77 577 68 HOH HOH . D 4 HOH A 78 578 69 HOH HOH . D 4 HOH A 79 579 70 HOH HOH . D 4 HOH A 80 580 71 HOH HOH . D 4 HOH A 81 581 72 HOH HOH . D 4 HOH A 82 582 73 HOH HOH . D 4 HOH A 83 583 75 HOH HOH . D 4 HOH A 84 584 76 HOH HOH . D 4 HOH A 85 585 77 HOH HOH . D 4 HOH A 86 586 79 HOH HOH . D 4 HOH A 87 587 80 HOH HOH . D 4 HOH A 88 588 81 HOH HOH . D 4 HOH A 89 589 82 HOH HOH . D 4 HOH A 90 590 84 HOH HOH . D 4 HOH A 91 591 87 HOH HOH . D 4 HOH A 92 592 88 HOH HOH . D 4 HOH A 93 593 90 HOH HOH . D 4 HOH A 94 594 91 HOH HOH . D 4 HOH A 95 595 92 HOH HOH . D 4 HOH A 96 596 94 HOH HOH . D 4 HOH A 97 597 95 HOH HOH . D 4 HOH A 98 598 97 HOH HOH . D 4 HOH A 99 599 98 HOH HOH . D 4 HOH A 100 600 99 HOH HOH . D 4 HOH A 101 601 100 HOH HOH . D 4 HOH A 102 602 101 HOH HOH . D 4 HOH A 103 603 103 HOH HOH . D 4 HOH A 104 604 105 HOH HOH . D 4 HOH A 105 605 107 HOH HOH . D 4 HOH A 106 606 109 HOH HOH . D 4 HOH A 107 607 110 HOH HOH . D 4 HOH A 108 608 112 HOH HOH . D 4 HOH A 109 609 113 HOH HOH . D 4 HOH A 110 610 114 HOH HOH . D 4 HOH A 111 611 115 HOH HOH . D 4 HOH A 112 612 119 HOH HOH . D 4 HOH A 113 613 121 HOH HOH . D 4 HOH A 114 614 122 HOH HOH . D 4 HOH A 115 615 123 HOH HOH . D 4 HOH A 116 616 127 HOH HOH . D 4 HOH A 117 617 128 HOH HOH . D 4 HOH A 118 618 135 HOH HOH . D 4 HOH A 119 619 136 HOH HOH . D 4 HOH A 120 620 137 HOH HOH . D 4 HOH A 121 621 138 HOH HOH . D 4 HOH A 122 622 140 HOH HOH . D 4 HOH A 123 623 143 HOH HOH . D 4 HOH A 124 624 144 HOH HOH . D 4 HOH A 125 625 145 HOH HOH . D 4 HOH A 126 626 146 HOH HOH . D 4 HOH A 127 627 152 HOH HOH . D 4 HOH A 128 628 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -12.55 15.021 -8.361 1 42.67 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 -13.27 15.432 -9.505 1 48.19 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 -12.091 13.603 -8.656 1 42.93 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 -12.504 13.343 -9.979 1 39.54 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 -10.573 13.476 -8.544 1 40.08 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 -10.018 14.2 -9.625 1 32.18 ? O3 GOL 401 A 1 HETATM 7 H H11 GOL . . . B 2 -11.693 15.674 -8.193 1 51.2 ? H11 GOL 401 A 1 HETATM 8 H H12 GOL . . . B 2 -13.19 15.041 -7.479 1 51.2 ? H12 GOL 401 A 1 HETATM 9 H HO1 GOL . . . B 2 -13.651 16.321 -9.35 1 57.82 ? HO1 GOL 401 A 1 HETATM 10 H H2 GOL . . . B 2 -12.568 12.913 -7.96 1 51.52 ? H2 GOL 401 A 1 HETATM 11 H HO2 GOL . . . B 2 -12.074 13.98 -10.586 1 47.45 ? HO2 GOL 401 A 1 HETATM 12 H H31 GOL . . . B 2 -10.228 13.887 -7.596 1 48.1 ? H31 GOL 401 A 1 HETATM 13 H H32 GOL . . . B 2 -10.277 12.428 -8.6 1 48.1 ? H32 GOL 401 A 1 HETATM 14 H HO3 GOL . . . B 2 -10.077 13.664 -10.443 1 38.62 ? HO3 GOL 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #