data_4WIV # _model_server_result.job_id 08U-L4bNqhszp6gGwZ02qA _model_server_result.datetime_utc '2024-11-28 12:24:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wiv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 4WIV # _exptl.entry_id 4WIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WIV _cell.length_a 43.562 _cell.length_b 49.21 _cell.length_c 60.991 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 191 n n C1 C2 GOL sing 192 n n C1 H11 GOL sing 193 n n C1 H12 GOL sing 194 n n O1 HO1 GOL sing 195 n n C2 O2 GOL sing 196 n n C2 C3 GOL sing 197 n n C2 H2 GOL sing 198 n n O2 HO2 GOL sing 199 n n C3 O3 GOL sing 200 n n C3 H31 GOL sing 201 n n C3 H32 GOL sing 202 n n O3 HO3 GOL sing 203 n n # _atom_sites.entry_id 4WIV _atom_sites.fract_transf_matrix[1][1] 0.022956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3P2 A 1 201 1 3P2 U32 . C 3 EDO A 1 202 1 EDO EDO . D 3 EDO A 1 203 2 EDO EDO . E 4 GOL A 1 204 3 GOL GOL . F 4 GOL A 1 205 4 GOL GOL . G 5 HOH A 1 301 136 HOH HOH . G 5 HOH A 2 302 76 HOH HOH . G 5 HOH A 3 303 64 HOH HOH . G 5 HOH A 4 304 143 HOH HOH . G 5 HOH A 5 305 92 HOH HOH . G 5 HOH A 6 306 51 HOH HOH . G 5 HOH A 7 307 49 HOH HOH . G 5 HOH A 8 308 19 HOH HOH . G 5 HOH A 9 309 86 HOH HOH . G 5 HOH A 10 310 123 HOH HOH . G 5 HOH A 11 311 95 HOH HOH . G 5 HOH A 12 312 84 HOH HOH . G 5 HOH A 13 313 25 HOH HOH . G 5 HOH A 14 314 26 HOH HOH . G 5 HOH A 15 315 50 HOH HOH . G 5 HOH A 16 316 10 HOH HOH . G 5 HOH A 17 317 139 HOH HOH . G 5 HOH A 18 318 142 HOH HOH . G 5 HOH A 19 319 22 HOH HOH . G 5 HOH A 20 320 8 HOH HOH . G 5 HOH A 21 321 60 HOH HOH . G 5 HOH A 22 322 83 HOH HOH . G 5 HOH A 23 323 37 HOH HOH . G 5 HOH A 24 324 118 HOH HOH . G 5 HOH A 25 325 42 HOH HOH . G 5 HOH A 26 326 21 HOH HOH . G 5 HOH A 27 327 28 HOH HOH . G 5 HOH A 28 328 101 HOH HOH . G 5 HOH A 29 329 144 HOH HOH . G 5 HOH A 30 330 63 HOH HOH . G 5 HOH A 31 331 27 HOH HOH . G 5 HOH A 32 332 18 HOH HOH . G 5 HOH A 33 333 140 HOH HOH . G 5 HOH A 34 334 43 HOH HOH . G 5 HOH A 35 335 69 HOH HOH . G 5 HOH A 36 336 38 HOH HOH . G 5 HOH A 37 337 39 HOH HOH . G 5 HOH A 38 338 17 HOH HOH . G 5 HOH A 39 339 20 HOH HOH . G 5 HOH A 40 340 6 HOH HOH . G 5 HOH A 41 341 109 HOH HOH . G 5 HOH A 42 342 29 HOH HOH . G 5 HOH A 43 343 147 HOH HOH . G 5 HOH A 44 344 153 HOH HOH . G 5 HOH A 45 345 74 HOH HOH . G 5 HOH A 46 346 16 HOH HOH . G 5 HOH A 47 347 138 HOH HOH . G 5 HOH A 48 348 81 HOH HOH . G 5 HOH A 49 349 122 HOH HOH . G 5 HOH A 50 350 98 HOH HOH . G 5 HOH A 51 351 46 HOH HOH . G 5 HOH A 52 352 145 HOH HOH . G 5 HOH A 53 353 132 HOH HOH . G 5 HOH A 54 354 150 HOH HOH . G 5 HOH A 55 355 87 HOH HOH . G 5 HOH A 56 356 120 HOH HOH . G 5 HOH A 57 357 78 HOH HOH . G 5 HOH A 58 358 115 HOH HOH . G 5 HOH A 59 359 71 HOH HOH . G 5 HOH A 60 360 149 HOH HOH . G 5 HOH A 61 361 94 HOH HOH . G 5 HOH A 62 362 89 HOH HOH . G 5 HOH A 63 363 154 HOH HOH . G 5 HOH A 64 364 103 HOH HOH . G 5 HOH A 65 365 135 HOH HOH . G 5 HOH A 66 366 124 HOH HOH . G 5 HOH A 67 367 107 HOH HOH . G 5 HOH A 68 368 113 HOH HOH . G 5 HOH A 69 369 44 HOH HOH . G 5 HOH A 70 370 131 HOH HOH . G 5 HOH A 71 371 127 HOH HOH . G 5 HOH A 72 372 88 HOH HOH . G 5 HOH A 73 373 114 HOH HOH . G 5 HOH A 74 374 116 HOH HOH . G 5 HOH A 75 375 128 HOH HOH . G 5 HOH A 76 376 1 HOH HOH . G 5 HOH A 77 377 2 HOH HOH . G 5 HOH A 78 378 3 HOH HOH . G 5 HOH A 79 379 4 HOH HOH . G 5 HOH A 80 380 5 HOH HOH . G 5 HOH A 81 381 7 HOH HOH . G 5 HOH A 82 382 9 HOH HOH . G 5 HOH A 83 383 11 HOH HOH . G 5 HOH A 84 384 12 HOH HOH . G 5 HOH A 85 385 13 HOH HOH . G 5 HOH A 86 386 14 HOH HOH . G 5 HOH A 87 387 15 HOH HOH . G 5 HOH A 88 388 23 HOH HOH . G 5 HOH A 89 389 24 HOH HOH . G 5 HOH A 90 390 30 HOH HOH . G 5 HOH A 91 391 31 HOH HOH . G 5 HOH A 92 392 32 HOH HOH . G 5 HOH A 93 393 33 HOH HOH . G 5 HOH A 94 394 34 HOH HOH . G 5 HOH A 95 395 35 HOH HOH . G 5 HOH A 96 396 36 HOH HOH . G 5 HOH A 97 397 40 HOH HOH . G 5 HOH A 98 398 41 HOH HOH . G 5 HOH A 99 399 45 HOH HOH . G 5 HOH A 100 400 47 HOH HOH . G 5 HOH A 101 401 48 HOH HOH . G 5 HOH A 102 402 52 HOH HOH . G 5 HOH A 103 403 53 HOH HOH . G 5 HOH A 104 404 54 HOH HOH . G 5 HOH A 105 405 55 HOH HOH . G 5 HOH A 106 406 56 HOH HOH . G 5 HOH A 107 407 57 HOH HOH . G 5 HOH A 108 408 58 HOH HOH . G 5 HOH A 109 409 59 HOH HOH . G 5 HOH A 110 410 61 HOH HOH . G 5 HOH A 111 411 62 HOH HOH . G 5 HOH A 112 412 65 HOH HOH . G 5 HOH A 113 413 66 HOH HOH . G 5 HOH A 114 414 67 HOH HOH . G 5 HOH A 115 415 68 HOH HOH . G 5 HOH A 116 416 70 HOH HOH . G 5 HOH A 117 417 72 HOH HOH . G 5 HOH A 118 418 73 HOH HOH . G 5 HOH A 119 419 75 HOH HOH . G 5 HOH A 120 420 77 HOH HOH . G 5 HOH A 121 421 79 HOH HOH . G 5 HOH A 122 422 80 HOH HOH . G 5 HOH A 123 423 82 HOH HOH . G 5 HOH A 124 424 85 HOH HOH . G 5 HOH A 125 425 90 HOH HOH . G 5 HOH A 126 426 91 HOH HOH . G 5 HOH A 127 427 93 HOH HOH . G 5 HOH A 128 428 96 HOH HOH . G 5 HOH A 129 429 97 HOH HOH . G 5 HOH A 130 430 99 HOH HOH . G 5 HOH A 131 431 100 HOH HOH . G 5 HOH A 132 432 102 HOH HOH . G 5 HOH A 133 433 104 HOH HOH . G 5 HOH A 134 434 105 HOH HOH . G 5 HOH A 135 435 106 HOH HOH . G 5 HOH A 136 436 108 HOH HOH . G 5 HOH A 137 437 110 HOH HOH . G 5 HOH A 138 438 111 HOH HOH . G 5 HOH A 139 439 112 HOH HOH . G 5 HOH A 140 440 117 HOH HOH . G 5 HOH A 141 441 119 HOH HOH . G 5 HOH A 142 442 121 HOH HOH . G 5 HOH A 143 443 125 HOH HOH . G 5 HOH A 144 444 126 HOH HOH . G 5 HOH A 145 445 129 HOH HOH . G 5 HOH A 146 446 130 HOH HOH . G 5 HOH A 147 447 133 HOH HOH . G 5 HOH A 148 448 134 HOH HOH . G 5 HOH A 149 449 137 HOH HOH . G 5 HOH A 150 450 141 HOH HOH . G 5 HOH A 151 451 146 HOH HOH . G 5 HOH A 152 452 148 HOH HOH . G 5 HOH A 153 453 151 HOH HOH . G 5 HOH A 154 454 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 10.239 -18.905 -16.178 1 37.95 ? C1 GOL 205 A 1 HETATM 2 O O1 GOL . . . F 4 11.42 -19.451 -15.635 1 49.98 ? O1 GOL 205 A 1 HETATM 3 C C2 GOL . . . F 4 10.285 -19.067 -17.687 1 30.64 ? C2 GOL 205 A 1 HETATM 4 O O2 GOL . . . F 4 11.631 -19.209 -18.102 1 21.46 ? O2 GOL 205 A 1 HETATM 5 C C3 GOL . . . F 4 9.655 -17.846 -18.339 1 29.64 ? C3 GOL 205 A 1 HETATM 6 O O3 GOL . . . F 4 10.476 -16.723 -18.121 1 15.7 ? O3 GOL 205 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #