data_4WJV # _model_server_result.job_id tSVAhDWEoTyrIYmpd5IB7w _model_server_result.datetime_utc '2024-10-12 15:26:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":602}' # _entry.id 4WJV # _exptl.entry_id 4WJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.45 _cell.angle_gamma 90 _cell.entry_id 4WJV _cell.length_a 198.578 _cell.length_b 96.493 _cell.length_c 196.445 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WJV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_and_software_defined_assembly 1 ? dimeric 2 author_and_software_defined_assembly 2 ? dimeric 2 author_and_software_defined_assembly 3 ? dimeric 2 author_and_software_defined_assembly 4 ? monomeric 1 author_and_software_defined_assembly 5 ? monomeric 1 author_and_software_defined_assembly 6 ? monomeric 1 author_and_software_defined_assembly 7 ? monomeric 1 author_and_software_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,K,Q,R,S 1 1 B,L,T,U 2 1 C,I,V,W 3 1 D,J,X,Y,Z 4 1 E,M 5 1 F,N 6 1 G,O 7 1 H,P 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N ? 5 Y N N ? 5 Z N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n M GLC 1 M 1 GLC O 700 MAL 4 n M GLC 2 M 2 GLC O 700 MAL 4 n N GLC 1 N 1 GLC M 700 MAL 4 n N GLC 2 N 2 GLC M 700 MAL 4 n O GLC 1 O 1 GLC P 700 MAL 4 n O GLC 2 O 2 GLC P 700 MAL 4 n P GLC 1 P 1 GLC N 700 MAL 4 n P GLC 2 P 2 GLC N 700 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 M O4 GLC . M GLC 1 1_555 M C1 GLC . M GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 sing covale ? covale2 N O4 GLC . N GLC 1 1_555 N C1 GLC . N GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 sing covale ? covale3 O O4 GLC . O GLC 1 1_555 O C1 GLC . O GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 sing covale ? covale4 P O4 GLC . P GLC 1 1_555 P C1 GLC . P GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.41 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 312 n n S O2 SO4 doub 313 n n S O3 SO4 sing 314 n n S O4 SO4 sing 315 n n # _atom_sites.entry_id 4WJV _atom_sites.fract_transf_matrix[1][1] 0.005036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002396 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 5 SO4 A 1 601 1 SO4 SO4 . R 5 SO4 A 1 602 11 SO4 SO4 . S 5 SO4 A 1 603 12 SO4 SO4 . T 5 SO4 B 1 601 3 SO4 SO4 . U 5 SO4 B 1 602 10 SO4 SO4 . V 5 SO4 C 1 601 2 SO4 SO4 . W 5 SO4 C 1 602 7 SO4 SO4 . X 5 SO4 D 1 601 4 SO4 SO4 . Y 5 SO4 D 1 602 8 SO4 SO4 . Z 5 SO4 D 1 603 9 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . Y 5 72.214 -59.414 16.475 1 45.9 ? S SO4 602 D 1 HETATM 2 O O1 SO4 . . . Y 5 73.618 -59.227 16.132 1 43.81 ? O1 SO4 602 D 1 HETATM 3 O O2 SO4 . . . Y 5 71.521 -60.018 15.342 1 42.42 ? O2 SO4 602 D 1 HETATM 4 O O3 SO4 . . . Y 5 72.098 -60.275 17.647 1 43.11 ? O3 SO4 602 D 1 HETATM 5 O O4 SO4 . . . Y 5 71.614 -58.119 16.774 1 52.49 ? O4 SO4 602 D 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #