data_4WL9 # _model_server_result.job_id G6USIPcRFNFyDExrckRNbw _model_server_result.datetime_utc '2025-02-22 23:34:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wl9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4WL9 # _exptl.entry_id 4WL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.158 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-HYDROXYCINNAMIC ACID" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4WL9 _cell.length_a 66.9 _cell.length_b 66.9 _cell.length_c 40.8 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 69 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id HC4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HC4 _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.678 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C9 H8 O3' _chem_comp.formula_weight 164.158 _chem_comp.id HC4 _chem_comp.mon_nstd_flag . _chem_comp.name "4'-HYDROXYCINNAMIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PARA-COUMARIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HC4 doub 129 n n C1 O2 HC4 sing 130 n n C1 C2 HC4 sing 131 n n O2 HO2 HC4 sing 132 n n C2 C3 HC4 doub 133 e n C2 H2 HC4 sing 134 n n C3 C1' HC4 sing 135 n n C3 H3 HC4 sing 136 n n C1' C2' HC4 doub 137 n y C1' C6' HC4 sing 138 n y C2' C3' HC4 sing 139 n y C2' H2' HC4 sing 140 n n C3' C4' HC4 doub 141 n y C3' H3' HC4 sing 142 n n C4' C5' HC4 sing 143 n y C4' O4' HC4 sing 144 n n C5' C6' HC4 doub 145 n y C5' H5' HC4 sing 146 n n C6' H6' HC4 sing 147 n n O4' HO4' HC4 sing 148 n n # _atom_sites.entry_id 4WL9 _atom_sites.fract_transf_matrix[1][1] 0.014948 _atom_sites.fract_transf_matrix[1][2] 0.00863 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01726 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HC4 A 1 201 126 HC4 HC4 . C 3 HOH A 1 301 247 HOH HOH . C 3 HOH A 2 302 211 HOH HOH . C 3 HOH A 3 303 246 HOH HOH . C 3 HOH A 4 304 272 HOH HOH . C 3 HOH A 5 305 248 HOH HOH . C 3 HOH A 6 306 257 HOH HOH . C 3 HOH A 7 307 206 HOH HOH . C 3 HOH A 8 308 208 HOH HOH . C 3 HOH A 9 309 209 HOH HOH . C 3 HOH A 10 310 255 HOH HOH . C 3 HOH A 11 311 289 HOH HOH . C 3 HOH A 12 312 245 HOH HOH . C 3 HOH A 13 313 221 HOH HOH . C 3 HOH A 14 314 223 HOH HOH . C 3 HOH A 15 315 233 HOH HOH . C 3 HOH A 16 316 243 HOH HOH . C 3 HOH A 17 317 230 HOH HOH . C 3 HOH A 18 318 203 HOH HOH . C 3 HOH A 19 319 277 HOH HOH . C 3 HOH A 20 320 229 HOH HOH . C 3 HOH A 21 321 228 HOH HOH . C 3 HOH A 22 322 213 HOH HOH . C 3 HOH A 23 323 219 HOH HOH . C 3 HOH A 24 324 254 HOH HOH . C 3 HOH A 25 325 240 HOH HOH . C 3 HOH A 26 326 210 HOH HOH . C 3 HOH A 27 327 271 HOH HOH . C 3 HOH A 28 328 263 HOH HOH . C 3 HOH A 29 329 241 HOH HOH . C 3 HOH A 30 330 249 HOH HOH . C 3 HOH A 31 331 226 HOH HOH . C 3 HOH A 32 332 258 HOH HOH . C 3 HOH A 33 333 227 HOH HOH . C 3 HOH A 34 334 265 HOH HOH . C 3 HOH A 35 335 268 HOH HOH . C 3 HOH A 36 336 216 HOH HOH . C 3 HOH A 37 337 251 HOH HOH . C 3 HOH A 38 338 267 HOH HOH . C 3 HOH A 39 339 250 HOH HOH . C 3 HOH A 40 340 288 HOH HOH . C 3 HOH A 41 341 235 HOH HOH . C 3 HOH A 42 342 217 HOH HOH . C 3 HOH A 43 343 273 HOH HOH . C 3 HOH A 44 344 204 HOH HOH . C 3 HOH A 45 345 276 HOH HOH . C 3 HOH A 46 346 218 HOH HOH . C 3 HOH A 47 347 214 HOH HOH . C 3 HOH A 48 348 256 HOH HOH . C 3 HOH A 49 349 261 HOH HOH . C 3 HOH A 50 350 234 HOH HOH . C 3 HOH A 51 351 239 HOH HOH . C 3 HOH A 52 352 225 HOH HOH . C 3 HOH A 53 353 269 HOH HOH . C 3 HOH A 54 354 274 HOH HOH . C 3 HOH A 55 355 253 HOH HOH . C 3 HOH A 56 356 207 HOH HOH . C 3 HOH A 57 357 262 HOH HOH . C 3 HOH A 58 358 252 HOH HOH . C 3 HOH A 59 359 290 HOH HOH . C 3 HOH A 60 360 280 HOH HOH . C 3 HOH A 61 361 279 HOH HOH . C 3 HOH A 62 362 266 HOH HOH . C 3 HOH A 63 363 202 HOH HOH . C 3 HOH A 64 364 278 HOH HOH . C 3 HOH A 65 365 281 HOH HOH . C 3 HOH A 66 366 244 HOH HOH . C 3 HOH A 67 367 260 HOH HOH . C 3 HOH A 68 368 259 HOH HOH . C 3 HOH A 69 369 205 HOH HOH . C 3 HOH A 70 370 264 HOH HOH . C 3 HOH A 71 371 242 HOH HOH . C 3 HOH A 72 372 284 HOH HOH . C 3 HOH A 73 373 275 HOH HOH . C 3 HOH A 74 374 285 HOH HOH . C 3 HOH A 75 375 270 HOH HOH . C 3 HOH A 76 376 286 HOH HOH . C 3 HOH A 77 377 200 HOH HOH . C 3 HOH A 78 378 201 HOH HOH . C 3 HOH A 79 379 212 HOH HOH . C 3 HOH A 80 380 215 HOH HOH . C 3 HOH A 81 381 220 HOH HOH . C 3 HOH A 82 382 222 HOH HOH . C 3 HOH A 83 383 224 HOH HOH . C 3 HOH A 84 384 231 HOH HOH . C 3 HOH A 85 385 232 HOH HOH . C 3 HOH A 86 386 236 HOH HOH . C 3 HOH A 87 387 237 HOH HOH . C 3 HOH A 88 388 238 HOH HOH . C 3 HOH A 89 389 282 HOH HOH . C 3 HOH A 90 390 283 HOH HOH . C 3 HOH A 91 391 287 HOH HOH . C 3 HOH A 92 392 291 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HC4 . . . B 2 12.055 2.91 -19.667 1 10.09 ? C1 HC4 201 A 1 HETATM 2 O O1 HC4 . . . B 2 12.289 3.112 -20.919 1 11.02 ? O1 HC4 201 A 1 HETATM 3 C C2 HC4 . . . B 2 13.053 1.985 -18.925 1 10.41 ? C2 HC4 201 A 1 HETATM 4 C C3 HC4 . . . B 2 13.836 1.128 -19.543 1 11.39 ? C3 HC4 201 A 1 HETATM 5 C C1' HC4 . . . B 2 14.869 0.344 -18.835 1 10.59 ? C1' HC4 201 A 1 HETATM 6 C C2' HC4 . . . B 2 15.685 -0.467 -19.675 1 10.9 ? C2' HC4 201 A 1 HETATM 7 C C3' HC4 . . . B 2 16.731 -1.198 -19.099 1 10.65 ? C3' HC4 201 A 1 HETATM 8 C C4' HC4 . . . B 2 16.975 -1.064 -17.721 1 10.85 ? C4' HC4 201 A 1 HETATM 9 C C5' HC4 . . . B 2 16.222 -0.218 -16.86 1 11.62 ? C5' HC4 201 A 1 HETATM 10 C C6' HC4 . . . B 2 15.147 0.466 -17.413 1 10.83 ? C6' HC4 201 A 1 HETATM 11 O O4' HC4 . . . B 2 17.991 -1.775 -17.169 1 11.85 ? O4' HC4 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 407 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #