data_4WLC # _model_server_result.job_id Wrlk9PzDfojqp95DmvNBxg _model_server_result.datetime_utc '2024-10-28 02:39:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wlc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 4WLC # _exptl.entry_id 4WLC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WLC _cell.length_a 72.989 _cell.length_b 83.736 _cell.length_c 103.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OD2 ASP 194 A ASP 194 1_555 B C1 BGC . A BGC 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.482 ? metalc ? metalc1 A OD1 ASP 21 A ASP 21 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc2 A OD1 ASN 23 A ASN 23 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc3 A OD1 ASP 25 A ASP 25 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 A OD2 ASP 25 A ASP 25 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc5 A O ILE 27 A ILE 27 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc6 A OD1 ASP 29 A ASP 29 1_555 F CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc7 A O ASP 148 A ASP 148 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc8 A OD1 ASP 151 A ASP 151 1_555 E CA CA . A CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc9 A O THR 417 A THR 417 1_555 G CA CA . A CA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc10 A OE1 GLU 508 A GLU 508 1_555 E CA CA . A CA 604 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.164 ? metalc ? metalc11 A OE2 GLU 508 A GLU 508 1_555 E CA CA . A CA 604 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc12 A OE1 GLU 516 A GLU 516 1_555 G CA CA . A CA 606 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc13 A OE2 GLU 516 A GLU 516 1_555 G CA CA . A CA 606 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc14 E CA CA . A CA 604 1_555 H O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc15 E CA CA . A CA 604 1_555 H O HOH . A HOH 731 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc16 G CA CA . A CA 606 1_555 H O HOH . A HOH 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc17 G CA CA . A CA 606 1_555 H O HOH . A HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 153 n n C1 C2 GOL sing 154 n n C1 H11 GOL sing 155 n n C1 H12 GOL sing 156 n n O1 HO1 GOL sing 157 n n C2 O2 GOL sing 158 n n C2 C3 GOL sing 159 n n C2 H2 GOL sing 160 n n O2 HO2 GOL sing 161 n n C3 O3 GOL sing 162 n n C3 H31 GOL sing 163 n n C3 H32 GOL sing 164 n n O3 HO3 GOL sing 165 n n # _atom_sites.entry_id 4WLC _atom_sites.fract_transf_matrix[1][1] 0.013701 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011942 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 601 1 BGC GLC . C 3 GOL A 1 602 1 GOL GOL . D 3 GOL A 1 603 2 GOL GOL . E 4 CA A 1 604 1 CA CA . F 4 CA A 1 605 2 CA CA . G 4 CA A 1 606 3 CA CA . H 5 HOH A 1 701 135 HOH HOH . H 5 HOH A 2 702 37 HOH HOH . H 5 HOH A 3 703 28 HOH HOH . H 5 HOH A 4 704 60 HOH HOH . H 5 HOH A 5 705 87 HOH HOH . H 5 HOH A 6 706 73 HOH HOH . H 5 HOH A 7 707 93 HOH HOH . H 5 HOH A 8 708 172 HOH HOH . H 5 HOH A 9 709 97 HOH HOH . H 5 HOH A 10 710 58 HOH HOH . H 5 HOH A 11 711 154 HOH HOH . H 5 HOH A 12 712 96 HOH HOH . H 5 HOH A 13 713 46 HOH HOH . H 5 HOH A 14 714 21 HOH HOH . H 5 HOH A 15 715 151 HOH HOH . H 5 HOH A 16 716 53 HOH HOH . H 5 HOH A 17 717 150 HOH HOH . H 5 HOH A 18 718 153 HOH HOH . H 5 HOH A 19 719 155 HOH HOH . H 5 HOH A 20 720 156 HOH HOH . H 5 HOH A 21 721 183 HOH HOH . H 5 HOH A 22 722 117 HOH HOH . H 5 HOH A 23 723 112 HOH HOH . H 5 HOH A 24 724 118 HOH HOH . H 5 HOH A 25 725 157 HOH HOH . H 5 HOH A 26 726 56 HOH HOH . H 5 HOH A 27 727 63 HOH HOH . H 5 HOH A 28 728 80 HOH HOH . H 5 HOH A 29 729 49 HOH HOH . H 5 HOH A 30 730 72 HOH HOH . H 5 HOH A 31 731 184 HOH HOH . H 5 HOH A 32 732 180 HOH HOH . H 5 HOH A 33 733 51 HOH HOH . H 5 HOH A 34 734 1 HOH HOH . H 5 HOH A 35 735 2 HOH HOH . H 5 HOH A 36 736 3 HOH HOH . H 5 HOH A 37 737 4 HOH HOH . H 5 HOH A 38 738 5 HOH HOH . H 5 HOH A 39 739 6 HOH HOH . H 5 HOH A 40 740 7 HOH HOH . H 5 HOH A 41 741 8 HOH HOH . H 5 HOH A 42 742 9 HOH HOH . H 5 HOH A 43 743 10 HOH HOH . H 5 HOH A 44 744 11 HOH HOH . H 5 HOH A 45 745 12 HOH HOH . H 5 HOH A 46 746 13 HOH HOH . H 5 HOH A 47 747 14 HOH HOH . H 5 HOH A 48 748 15 HOH HOH . H 5 HOH A 49 749 16 HOH HOH . H 5 HOH A 50 750 17 HOH HOH . H 5 HOH A 51 751 18 HOH HOH . H 5 HOH A 52 752 19 HOH HOH . H 5 HOH A 53 753 20 HOH HOH . H 5 HOH A 54 754 22 HOH HOH . H 5 HOH A 55 755 23 HOH HOH . H 5 HOH A 56 756 24 HOH HOH . H 5 HOH A 57 757 25 HOH HOH . H 5 HOH A 58 758 26 HOH HOH . H 5 HOH A 59 759 27 HOH HOH . H 5 HOH A 60 760 29 HOH HOH . H 5 HOH A 61 761 30 HOH HOH . H 5 HOH A 62 762 31 HOH HOH . H 5 HOH A 63 763 32 HOH HOH . H 5 HOH A 64 764 33 HOH HOH . H 5 HOH A 65 765 34 HOH HOH . H 5 HOH A 66 766 35 HOH HOH . H 5 HOH A 67 767 36 HOH HOH . H 5 HOH A 68 768 38 HOH HOH . H 5 HOH A 69 769 39 HOH HOH . H 5 HOH A 70 770 40 HOH HOH . H 5 HOH A 71 771 41 HOH HOH . H 5 HOH A 72 772 42 HOH HOH . H 5 HOH A 73 773 43 HOH HOH . H 5 HOH A 74 774 44 HOH HOH . H 5 HOH A 75 775 45 HOH HOH . H 5 HOH A 76 776 47 HOH HOH . H 5 HOH A 77 777 48 HOH HOH . H 5 HOH A 78 778 50 HOH HOH . H 5 HOH A 79 779 54 HOH HOH . H 5 HOH A 80 780 55 HOH HOH . H 5 HOH A 81 781 57 HOH HOH . H 5 HOH A 82 782 59 HOH HOH . H 5 HOH A 83 783 61 HOH HOH . H 5 HOH A 84 784 62 HOH HOH . H 5 HOH A 85 785 64 HOH HOH . H 5 HOH A 86 786 65 HOH HOH . H 5 HOH A 87 787 66 HOH HOH . H 5 HOH A 88 788 67 HOH HOH . H 5 HOH A 89 789 68 HOH HOH . H 5 HOH A 90 790 69 HOH HOH . H 5 HOH A 91 791 70 HOH HOH . H 5 HOH A 92 792 71 HOH HOH . H 5 HOH A 93 793 74 HOH HOH . H 5 HOH A 94 794 75 HOH HOH . H 5 HOH A 95 795 76 HOH HOH . H 5 HOH A 96 796 77 HOH HOH . H 5 HOH A 97 797 78 HOH HOH . H 5 HOH A 98 798 79 HOH HOH . H 5 HOH A 99 799 81 HOH HOH . H 5 HOH A 100 800 83 HOH HOH . H 5 HOH A 101 801 84 HOH HOH . H 5 HOH A 102 802 85 HOH HOH . H 5 HOH A 103 803 86 HOH HOH . H 5 HOH A 104 804 88 HOH HOH . H 5 HOH A 105 805 89 HOH HOH . H 5 HOH A 106 806 90 HOH HOH . H 5 HOH A 107 807 91 HOH HOH . H 5 HOH A 108 808 92 HOH HOH . H 5 HOH A 109 809 94 HOH HOH . H 5 HOH A 110 810 95 HOH HOH . H 5 HOH A 111 811 98 HOH HOH . H 5 HOH A 112 812 99 HOH HOH . H 5 HOH A 113 813 100 HOH HOH . H 5 HOH A 114 814 101 HOH HOH . H 5 HOH A 115 815 102 HOH HOH . H 5 HOH A 116 816 103 HOH HOH . H 5 HOH A 117 817 104 HOH HOH . H 5 HOH A 118 818 105 HOH HOH . H 5 HOH A 119 819 106 HOH HOH . H 5 HOH A 120 820 107 HOH HOH . H 5 HOH A 121 821 108 HOH HOH . H 5 HOH A 122 822 109 HOH HOH . H 5 HOH A 123 823 110 HOH HOH . H 5 HOH A 124 824 111 HOH HOH . H 5 HOH A 125 825 113 HOH HOH . H 5 HOH A 126 826 114 HOH HOH . H 5 HOH A 127 827 116 HOH HOH . H 5 HOH A 128 828 119 HOH HOH . H 5 HOH A 129 829 120 HOH HOH . H 5 HOH A 130 830 121 HOH HOH . H 5 HOH A 131 831 122 HOH HOH . H 5 HOH A 132 832 123 HOH HOH . H 5 HOH A 133 833 124 HOH HOH . H 5 HOH A 134 834 125 HOH HOH . H 5 HOH A 135 835 126 HOH HOH . H 5 HOH A 136 836 127 HOH HOH . H 5 HOH A 137 837 128 HOH HOH . H 5 HOH A 138 838 129 HOH HOH . H 5 HOH A 139 839 130 HOH HOH . H 5 HOH A 140 840 131 HOH HOH . H 5 HOH A 141 841 132 HOH HOH . H 5 HOH A 142 842 133 HOH HOH . H 5 HOH A 143 843 134 HOH HOH . H 5 HOH A 144 844 136 HOH HOH . H 5 HOH A 145 845 137 HOH HOH . H 5 HOH A 146 846 139 HOH HOH . H 5 HOH A 147 847 140 HOH HOH . H 5 HOH A 148 848 141 HOH HOH . H 5 HOH A 149 849 142 HOH HOH . H 5 HOH A 150 850 143 HOH HOH . H 5 HOH A 151 851 144 HOH HOH . H 5 HOH A 152 852 145 HOH HOH . H 5 HOH A 153 853 146 HOH HOH . H 5 HOH A 154 854 147 HOH HOH . H 5 HOH A 155 855 148 HOH HOH . H 5 HOH A 156 856 149 HOH HOH . H 5 HOH A 157 857 158 HOH HOH . H 5 HOH A 158 858 159 HOH HOH . H 5 HOH A 159 859 160 HOH HOH . H 5 HOH A 160 860 161 HOH HOH . H 5 HOH A 161 861 162 HOH HOH . H 5 HOH A 162 862 163 HOH HOH . H 5 HOH A 163 863 164 HOH HOH . H 5 HOH A 164 864 165 HOH HOH . H 5 HOH A 165 865 166 HOH HOH . H 5 HOH A 166 866 167 HOH HOH . H 5 HOH A 167 867 168 HOH HOH . H 5 HOH A 168 868 169 HOH HOH . H 5 HOH A 169 869 170 HOH HOH . H 5 HOH A 170 870 171 HOH HOH . H 5 HOH A 171 871 173 HOH HOH . H 5 HOH A 172 872 174 HOH HOH . H 5 HOH A 173 873 175 HOH HOH . H 5 HOH A 174 874 176 HOH HOH . H 5 HOH A 175 875 177 HOH HOH . H 5 HOH A 176 876 178 HOH HOH . H 5 HOH A 177 877 179 HOH HOH . H 5 HOH A 178 878 181 HOH HOH . H 5 HOH A 179 879 182 HOH HOH . H 5 HOH A 180 880 185 HOH HOH . H 5 HOH A 181 881 186 HOH HOH . H 5 HOH A 182 882 187 HOH HOH . H 5 HOH A 183 883 188 HOH HOH . H 5 HOH A 184 884 189 HOH HOH . H 5 HOH A 185 885 190 HOH HOH . H 5 HOH A 186 886 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 14.524 -0.326 5.953 1 36.64 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . C 3 13.362 -0.03 6.698 1 36.61 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . C 3 14.605 0.585 4.731 1 44.3 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . C 3 14.577 -0.175 3.542 1 41.83 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . C 3 13.444 1.572 4.741 1 33.33 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . C 3 13.588 2.459 3.656 1 35.25 ? O3 GOL 602 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #