data_4WLF # _model_server_result.job_id OOJnZPfjIq328_kfSAvgGQ _model_server_result.datetime_utc '2025-07-19 08:30:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wlf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4WLF # _exptl.entry_id 4WLF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-hydroxybutanedioic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WLF _cell.length_a 60.246 _cell.length_b 152.183 _cell.length_c 155.034 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WLF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id LMR _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-hydroxybutanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms L-Malate # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1A LMR doub 194 n n C1 O1B LMR sing 195 n n C1 C2 LMR sing 196 n n C2 O2 LMR sing 197 n n C2 C3 LMR sing 198 n n C3 C4 LMR sing 199 n n C4 O4A LMR sing 200 n n C4 O4B LMR doub 201 n n C2 H2 LMR sing 202 n n O2 HO2 LMR sing 203 n n C3 H3 LMR sing 204 n n C3 H3A LMR sing 205 n n O1B H4 LMR sing 206 n n O4A H5 LMR sing 207 n n # _atom_sites.entry_id 4WLF _atom_sites.fract_transf_matrix[1][1] 0.016599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00645 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 LMR A 1 401 1 LMR MLT . F 3 PO4 A 1 402 1 PO4 PO4 . G 2 LMR B 1 401 2 LMR MLT . H 3 PO4 B 1 402 2 PO4 PO4 . I 2 LMR C 1 401 3 LMR MLT . J 3 PO4 C 1 402 3 PO4 PO4 . K 2 LMR D 1 401 4 LMR MLT . L 3 PO4 D 1 402 4 PO4 PO4 . M 4 HOH A 1 501 1 HOH HOH . M 4 HOH A 2 502 19 HOH HOH . M 4 HOH A 3 503 6 HOH HOH . M 4 HOH A 4 504 4 HOH HOH . M 4 HOH A 5 505 5 HOH HOH . M 4 HOH A 6 506 8 HOH HOH . M 4 HOH A 7 507 12 HOH HOH . M 4 HOH A 8 508 13 HOH HOH . M 4 HOH A 9 509 14 HOH HOH . M 4 HOH A 10 510 15 HOH HOH . M 4 HOH A 11 511 16 HOH HOH . M 4 HOH A 12 512 22 HOH HOH . M 4 HOH A 13 513 26 HOH HOH . M 4 HOH A 14 514 27 HOH HOH . M 4 HOH A 15 515 32 HOH HOH . M 4 HOH A 16 516 37 HOH HOH . M 4 HOH A 17 517 39 HOH HOH . M 4 HOH A 18 518 41 HOH HOH . M 4 HOH A 19 519 42 HOH HOH . N 4 HOH B 1 501 2 HOH HOH . N 4 HOH B 2 502 11 HOH HOH . N 4 HOH B 3 503 18 HOH HOH . N 4 HOH B 4 504 20 HOH HOH . N 4 HOH B 5 505 21 HOH HOH . N 4 HOH B 6 506 24 HOH HOH . N 4 HOH B 7 507 25 HOH HOH . N 4 HOH B 8 508 30 HOH HOH . N 4 HOH B 9 509 31 HOH HOH . N 4 HOH B 10 510 33 HOH HOH . N 4 HOH B 11 511 40 HOH HOH . N 4 HOH B 12 512 43 HOH HOH . O 4 HOH C 1 501 23 HOH HOH . O 4 HOH C 2 502 29 HOH HOH . O 4 HOH C 3 503 34 HOH HOH . O 4 HOH C 4 504 35 HOH HOH . O 4 HOH C 5 505 38 HOH HOH . P 4 HOH D 1 501 3 HOH HOH . P 4 HOH D 2 502 7 HOH HOH . P 4 HOH D 3 503 9 HOH HOH . P 4 HOH D 4 504 10 HOH HOH . P 4 HOH D 5 505 17 HOH HOH . P 4 HOH D 6 506 28 HOH HOH . P 4 HOH D 7 507 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMR . . . E 2 30.872 -24.911 -18.212 1 33.22 ? C1 LMR 401 A 1 HETATM 2 O O1A LMR . . . E 2 29.869 -24.172 -18.223 1 32.87 ? O1A LMR 401 A 1 HETATM 3 O O1B LMR . . . E 2 30.858 -26.166 -18.167 1 32.73 ? O1B LMR 401 A 1 HETATM 4 C C2 LMR . . . E 2 32.228 -24.213 -18.265 1 34.17 ? C2 LMR 401 A 1 HETATM 5 O O2 LMR . . . E 2 33.256 -25.183 -18.421 1 34.21 ? O2 LMR 401 A 1 HETATM 6 C C3 LMR . . . E 2 32.283 -23.226 -19.446 1 35.74 ? C3 LMR 401 A 1 HETATM 7 C C4 LMR . . . E 2 32.247 -23.967 -20.796 1 36.49 ? C4 LMR 401 A 1 HETATM 8 O O4A LMR . . . E 2 31.564 -25.01 -20.879 1 37.69 ? O4A LMR 401 A 1 HETATM 9 O O4B LMR . . . E 2 32.91 -23.475 -21.73 1 36.12 ? O4B LMR 401 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #