data_4WLI # _model_server_result.job_id vvCMVJhC9I3O8Q0ppm8XBg _model_server_result.datetime_utc '2024-12-09 01:04:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4WLI # _exptl.entry_id 4WLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WLI _cell.length_a 50.01 _cell.length_b 117.27 _cell.length_c 61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 30.5 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 4WLI _atom_sites.fract_transf_matrix[1][1] 0.019996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016393 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 1 EDO EDO . C 2 EDO A 1 302 2 EDO EDO . D 2 EDO A 1 303 3 EDO EDO . E 2 EDO A 1 304 5 EDO EDO . F 3 HOH A 1 401 95 HOH HOH . F 3 HOH A 2 402 141 HOH HOH . F 3 HOH A 3 403 46 HOH HOH . F 3 HOH A 4 404 156 HOH HOH . F 3 HOH A 5 405 107 HOH HOH . F 3 HOH A 6 406 33 HOH HOH . F 3 HOH A 7 407 140 HOH HOH . F 3 HOH A 8 408 59 HOH HOH . F 3 HOH A 9 409 28 HOH HOH . F 3 HOH A 10 410 131 HOH HOH . F 3 HOH A 11 411 23 HOH HOH . F 3 HOH A 12 412 121 HOH HOH . F 3 HOH A 13 413 94 HOH HOH . F 3 HOH A 14 414 45 HOH HOH . F 3 HOH A 15 415 48 HOH HOH . F 3 HOH A 16 416 99 HOH HOH . F 3 HOH A 17 417 112 HOH HOH . F 3 HOH A 18 418 37 HOH HOH . F 3 HOH A 19 419 14 HOH HOH . F 3 HOH A 20 420 10 HOH HOH . F 3 HOH A 21 421 125 HOH HOH . F 3 HOH A 22 422 19 HOH HOH . F 3 HOH A 23 423 8 HOH HOH . F 3 HOH A 24 424 17 HOH HOH . F 3 HOH A 25 425 54 HOH HOH . F 3 HOH A 26 426 9 HOH HOH . F 3 HOH A 27 427 22 HOH HOH . F 3 HOH A 28 428 139 HOH HOH . F 3 HOH A 29 429 35 HOH HOH . F 3 HOH A 30 430 105 HOH HOH . F 3 HOH A 31 431 31 HOH HOH . F 3 HOH A 32 432 13 HOH HOH . F 3 HOH A 33 433 143 HOH HOH . F 3 HOH A 34 434 5 HOH HOH . F 3 HOH A 35 435 36 HOH HOH . F 3 HOH A 36 436 55 HOH HOH . F 3 HOH A 37 437 100 HOH HOH . F 3 HOH A 38 438 154 HOH HOH . F 3 HOH A 39 439 16 HOH HOH . F 3 HOH A 40 440 25 HOH HOH . F 3 HOH A 41 441 11 HOH HOH . F 3 HOH A 42 442 69 HOH HOH . F 3 HOH A 43 443 52 HOH HOH . F 3 HOH A 44 444 47 HOH HOH . F 3 HOH A 45 445 53 HOH HOH . F 3 HOH A 46 446 101 HOH HOH . F 3 HOH A 47 447 3 HOH HOH . F 3 HOH A 48 448 30 HOH HOH . F 3 HOH A 49 449 26 HOH HOH . F 3 HOH A 50 450 117 HOH HOH . F 3 HOH A 51 451 12 HOH HOH . F 3 HOH A 52 452 29 HOH HOH . F 3 HOH A 53 453 108 HOH HOH . F 3 HOH A 54 454 145 HOH HOH . F 3 HOH A 55 455 114 HOH HOH . F 3 HOH A 56 456 150 HOH HOH . F 3 HOH A 57 457 7 HOH HOH . F 3 HOH A 58 458 70 HOH HOH . F 3 HOH A 59 459 60 HOH HOH . F 3 HOH A 60 460 138 HOH HOH . F 3 HOH A 61 461 151 HOH HOH . F 3 HOH A 62 462 153 HOH HOH . F 3 HOH A 63 463 116 HOH HOH . F 3 HOH A 64 464 119 HOH HOH . F 3 HOH A 65 465 110 HOH HOH . F 3 HOH A 66 466 102 HOH HOH . F 3 HOH A 67 467 152 HOH HOH . F 3 HOH A 68 468 118 HOH HOH . F 3 HOH A 69 469 106 HOH HOH . F 3 HOH A 70 470 40 HOH HOH . F 3 HOH A 71 471 62 HOH HOH . F 3 HOH A 72 472 43 HOH HOH . F 3 HOH A 73 473 157 HOH HOH . F 3 HOH A 74 474 155 HOH HOH . F 3 HOH A 75 475 57 HOH HOH . F 3 HOH A 76 476 146 HOH HOH . F 3 HOH A 77 477 111 HOH HOH . F 3 HOH A 78 478 86 HOH HOH . F 3 HOH A 79 479 1 HOH HOH . F 3 HOH A 80 480 2 HOH HOH . F 3 HOH A 81 481 4 HOH HOH . F 3 HOH A 82 482 6 HOH HOH . F 3 HOH A 83 483 15 HOH HOH . F 3 HOH A 84 484 18 HOH HOH . F 3 HOH A 85 485 20 HOH HOH . F 3 HOH A 86 486 21 HOH HOH . F 3 HOH A 87 487 24 HOH HOH . F 3 HOH A 88 488 27 HOH HOH . F 3 HOH A 89 489 32 HOH HOH . F 3 HOH A 90 490 34 HOH HOH . F 3 HOH A 91 491 41 HOH HOH . F 3 HOH A 92 492 42 HOH HOH . F 3 HOH A 93 493 49 HOH HOH . F 3 HOH A 94 494 50 HOH HOH . F 3 HOH A 95 495 56 HOH HOH . F 3 HOH A 96 496 61 HOH HOH . F 3 HOH A 97 497 63 HOH HOH . F 3 HOH A 98 498 64 HOH HOH . F 3 HOH A 99 499 65 HOH HOH . F 3 HOH A 100 500 66 HOH HOH . F 3 HOH A 101 501 67 HOH HOH . F 3 HOH A 102 502 68 HOH HOH . F 3 HOH A 103 503 71 HOH HOH . F 3 HOH A 104 504 72 HOH HOH . F 3 HOH A 105 505 74 HOH HOH . F 3 HOH A 106 506 75 HOH HOH . F 3 HOH A 107 507 81 HOH HOH . F 3 HOH A 108 508 83 HOH HOH . F 3 HOH A 109 509 85 HOH HOH . F 3 HOH A 110 510 96 HOH HOH . F 3 HOH A 111 511 103 HOH HOH . F 3 HOH A 112 512 113 HOH HOH . F 3 HOH A 113 513 115 HOH HOH . F 3 HOH A 114 514 120 HOH HOH . F 3 HOH A 115 515 122 HOH HOH . F 3 HOH A 116 516 123 HOH HOH . F 3 HOH A 117 517 124 HOH HOH . F 3 HOH A 118 518 126 HOH HOH . F 3 HOH A 119 519 127 HOH HOH . F 3 HOH A 120 520 128 HOH HOH . F 3 HOH A 121 521 130 HOH HOH . F 3 HOH A 122 522 132 HOH HOH . F 3 HOH A 123 523 136 HOH HOH . F 3 HOH A 124 524 137 HOH HOH . F 3 HOH A 125 525 142 HOH HOH . F 3 HOH A 126 526 144 HOH HOH . F 3 HOH A 127 527 148 HOH HOH . F 3 HOH A 128 528 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -26.141 29.246 23.287 1 29.74 ? C1 EDO 303 A 1 HETATM 2 O O1 EDO . . . D 2 -26.961 28.241 23.875 1 20.62 ? O1 EDO 303 A 1 HETATM 3 C C2 EDO . . . D 2 -26.909 29.944 22.157 1 30.9 ? C2 EDO 303 A 1 HETATM 4 O O2 EDO . . . D 2 -26.626 29.319 20.941 1 36.34 ? O2 EDO 303 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #