data_4WLO # _model_server_result.job_id exI_fHZqXxExQXR6PrmS2w _model_server_result.datetime_utc '2025-08-30 13:30:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wlo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4WLO # _exptl.entry_id 4WLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 665.441 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WLO _cell.length_a 59.989 _cell.length_b 152.191 _cell.length_c 155.869 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C21 H29 N7 O14 P2' _chem_comp.formula_weight 665.441 _chem_comp.id NAI _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NADH # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAI doub 237 n n PA O2A NAI sing 238 n n PA O5B NAI sing 239 n n PA O3 NAI sing 240 n n O2A HOA2 NAI sing 241 n n O5B C5B NAI sing 242 n n C5B C4B NAI sing 243 n n C5B H51A NAI sing 244 n n C5B H52A NAI sing 245 n n C4B O4B NAI sing 246 n n C4B C3B NAI sing 247 n n C4B H4B NAI sing 248 n n O4B C1B NAI sing 249 n n C3B O3B NAI sing 250 n n C3B C2B NAI sing 251 n n C3B H3B NAI sing 252 n n O3B HO3A NAI sing 253 n n C2B O2B NAI sing 254 n n C2B C1B NAI sing 255 n n C2B H2B NAI sing 256 n n O2B HO2A NAI sing 257 n n C1B N9A NAI sing 258 n n C1B H1B NAI sing 259 n n N9A C8A NAI sing 260 n y N9A C4A NAI sing 261 n y C8A N7A NAI doub 262 n y C8A H8A NAI sing 263 n n N7A C5A NAI sing 264 n y C5A C6A NAI sing 265 n y C5A C4A NAI doub 266 n y C6A N6A NAI sing 267 n n C6A N1A NAI doub 268 n y N6A H61A NAI sing 269 n n N6A H62A NAI sing 270 n n N1A C2A NAI sing 271 n y C2A N3A NAI doub 272 n y C2A H2A NAI sing 273 n n N3A C4A NAI sing 274 n y O3 PN NAI sing 275 n n PN O1N NAI sing 276 n n PN O2N NAI doub 277 n n PN O5D NAI sing 278 n n O1N HO1N NAI sing 279 n n O5D C5D NAI sing 280 n n C5D C4D NAI sing 281 n n C5D H51N NAI sing 282 n n C5D H52N NAI sing 283 n n C4D O4D NAI sing 284 n n C4D C3D NAI sing 285 n n C4D H4D NAI sing 286 n n O4D C1D NAI sing 287 n n C3D O3D NAI sing 288 n n C3D C2D NAI sing 289 n n C3D H3D NAI sing 290 n n O3D HO3N NAI sing 291 n n C2D O2D NAI sing 292 n n C2D C1D NAI sing 293 n n C2D H2D NAI sing 294 n n O2D HO2N NAI sing 295 n n C1D N1N NAI sing 296 n n C1D H1D NAI sing 297 n n N1N C2N NAI sing 298 n n N1N C6N NAI sing 299 n n C2N C3N NAI doub 300 n n C2N H2N NAI sing 301 n n C3N C7N NAI sing 302 n n C3N C4N NAI sing 303 n n C7N O7N NAI doub 304 n n C7N N7N NAI sing 305 n n N7N H71N NAI sing 306 n n N7N H72N NAI sing 307 n n C4N C5N NAI sing 308 n n C4N H4N NAI sing 309 n n C4N H42N NAI sing 310 n n C5N C6N NAI doub 311 n n C5N H5N NAI sing 312 n n C6N H6N NAI sing 313 n n # _atom_sites.entry_id 4WLO _atom_sites.fract_transf_matrix[1][1] 0.01667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAI A 1 401 1 NAI NAI . F 3 OAA A 1 402 3 OAA OAA . G 2 NAI B 1 401 2 NAI NAI . H 3 OAA B 1 402 1 OAA OAA . I 2 NAI C 1 401 3 NAI NAI . J 3 OAA C 1 402 4 OAA OAA . K 2 NAI D 1 401 4 NAI NAI . L 3 OAA D 1 402 2 OAA OAA . M 4 HOH A 1 501 13 HOH HOH . M 4 HOH A 2 502 7 HOH HOH . M 4 HOH A 3 503 12 HOH HOH . N 4 HOH B 1 501 24 HOH HOH . N 4 HOH B 2 502 15 HOH HOH . N 4 HOH B 3 503 2 HOH HOH . N 4 HOH B 4 504 3 HOH HOH . N 4 HOH B 5 505 5 HOH HOH . N 4 HOH B 6 506 6 HOH HOH . N 4 HOH B 7 507 11 HOH HOH . N 4 HOH B 8 508 14 HOH HOH . N 4 HOH B 9 509 16 HOH HOH . N 4 HOH B 10 510 17 HOH HOH . N 4 HOH B 11 511 19 HOH HOH . N 4 HOH B 12 512 20 HOH HOH . N 4 HOH B 13 513 21 HOH HOH . N 4 HOH B 14 514 22 HOH HOH . N 4 HOH B 15 515 23 HOH HOH . N 4 HOH B 16 516 25 HOH HOH . O 4 HOH C 1 501 4 HOH HOH . O 4 HOH C 2 502 8 HOH HOH . P 4 HOH D 1 501 18 HOH HOH . P 4 HOH D 2 502 1 HOH HOH . P 4 HOH D 3 503 9 HOH HOH . P 4 HOH D 4 504 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAI . . . E 2 20.492 -2.735 -21.786 1 39.71 ? PA NAI 401 A 1 HETATM 2 O O1A NAI . . . E 2 20.78 -2.036 -23.054 1 41.2 ? O1A NAI 401 A 1 HETATM 3 O O2A NAI . . . E 2 21.599 -3.406 -21.065 1 39.73 ? O2A NAI 401 A 1 HETATM 4 O O5B NAI . . . E 2 19.367 -3.817 -22.154 1 37.17 ? O5B NAI 401 A 1 HETATM 5 C C5B NAI . . . E 2 18.121 -3.395 -22.627 1 37.13 ? C5B NAI 401 A 1 HETATM 6 C C4B NAI . . . E 2 17.327 -4.642 -23.056 1 37.47 ? C4B NAI 401 A 1 HETATM 7 O O4B NAI . . . E 2 16.034 -4.192 -23.573 1 39.17 ? O4B NAI 401 A 1 HETATM 8 C C3B NAI . . . E 2 18.006 -5.433 -24.2 1 37.96 ? C3B NAI 401 A 1 HETATM 9 O O3B NAI . . . E 2 18.058 -6.836 -23.853 1 37.45 ? O3B NAI 401 A 1 HETATM 10 C C2B NAI . . . E 2 17.086 -5.226 -25.406 1 38.11 ? C2B NAI 401 A 1 HETATM 11 O O2B NAI . . . E 2 17.042 -6.39 -26.273 1 36.01 ? O2B NAI 401 A 1 HETATM 12 C C1B NAI . . . E 2 15.739 -5.048 -24.723 1 39.56 ? C1B NAI 401 A 1 HETATM 13 N N9A NAI . . . E 2 14.709 -4.502 -25.669 1 40.22 ? N9A NAI 401 A 1 HETATM 14 C C8A NAI . . . E 2 14.758 -3.423 -26.446 1 41.4 ? C8A NAI 401 A 1 HETATM 15 N N7A NAI . . . E 2 13.603 -3.346 -27.104 1 42.58 ? N7A NAI 401 A 1 HETATM 16 C C5A NAI . . . E 2 12.841 -4.386 -26.747 1 42.65 ? C5A NAI 401 A 1 HETATM 17 C C6A NAI . . . E 2 11.611 -4.785 -27.118 1 44.54 ? C6A NAI 401 A 1 HETATM 18 N N6A NAI . . . E 2 10.964 -4.043 -28.012 1 45.57 ? N6A NAI 401 A 1 HETATM 19 N N1A NAI . . . E 2 11.029 -5.882 -26.614 1 45.5 ? N1A NAI 401 A 1 HETATM 20 C C2A NAI . . . E 2 11.737 -6.636 -25.679 1 44.67 ? C2A NAI 401 A 1 HETATM 21 N N3A NAI . . . E 2 13.018 -6.211 -25.319 1 42.99 ? N3A NAI 401 A 1 HETATM 22 C C4A NAI . . . E 2 13.535 -5.095 -25.859 1 41.38 ? C4A NAI 401 A 1 HETATM 23 O O3 NAI . . . E 2 19.794 -1.651 -20.778 1 39.3 ? O3 NAI 401 A 1 HETATM 24 P PN NAI . . . E 2 19.588 -1.89 -19.178 1 37.61 ? PN NAI 401 A 1 HETATM 25 O O1N NAI . . . E 2 20.825 -1.496 -18.486 1 38.77 ? O1N NAI 401 A 1 HETATM 26 O O2N NAI . . . E 2 19.03 -3.253 -19.047 1 36.44 ? O2N NAI 401 A 1 HETATM 27 O O5D NAI . . . E 2 18.476 -0.766 -18.759 1 40.42 ? O5D NAI 401 A 1 HETATM 28 C C5D NAI . . . E 2 17.124 -0.907 -19.214 1 42.78 ? C5D NAI 401 A 1 HETATM 29 C C4D NAI . . . E 2 16.364 0.344 -18.786 1 44.58 ? C4D NAI 401 A 1 HETATM 30 O O4D NAI . . . E 2 16.35 0.459 -17.326 1 45.66 ? O4D NAI 401 A 1 HETATM 31 C C3D NAI . . . E 2 17.01 1.635 -19.314 1 44.11 ? C3D NAI 401 A 1 HETATM 32 O O3D NAI . . . E 2 16.015 2.413 -19.999 1 43.5 ? O3D NAI 401 A 1 HETATM 33 C C2D NAI . . . E 2 17.459 2.348 -18.064 1 44.47 ? C2D NAI 401 A 1 HETATM 34 O O2D NAI . . . E 2 17.367 3.779 -18.199 1 44.44 ? O2D NAI 401 A 1 HETATM 35 C C1D NAI . . . E 2 16.448 1.847 -17.038 1 45.06 ? C1D NAI 401 A 1 HETATM 36 N N1N NAI . . . E 2 16.891 1.998 -15.63 1 47.28 ? N1N NAI 401 A 1 HETATM 37 C C2N NAI . . . E 2 15.952 2.341 -14.651 1 48.52 ? C2N NAI 401 A 1 HETATM 38 C C3N NAI . . . E 2 16.315 2.494 -13.303 1 48.71 ? C3N NAI 401 A 1 HETATM 39 C C7N NAI . . . E 2 15.394 2.847 -12.29 1 46.38 ? C7N NAI 401 A 1 HETATM 40 O O7N NAI . . . E 2 15.767 2.97 -11.127 1 46.13 ? O7N NAI 401 A 1 HETATM 41 N N7N NAI . . . E 2 14.116 3.04 -12.616 1 47.12 ? N7N NAI 401 A 1 HETATM 42 C C4N NAI . . . E 2 17.65 2.25 -12.902 1 49.85 ? C4N NAI 401 A 1 HETATM 43 C C5N NAI . . . E 2 18.564 1.902 -13.898 1 48.45 ? C5N NAI 401 A 1 HETATM 44 C C6N NAI . . . E 2 18.211 1.756 -15.232 1 47.97 ? C6N NAI 401 A 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 587 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #