data_4WNJ # _model_server_result.job_id ZrUNyZVFNCXdIkcS4WTBag _model_server_result.datetime_utc '2024-10-12 20:18:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wnj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 4WNJ # _exptl.entry_id 4WNJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.236 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WNJ _cell.length_a 42.858 _cell.length_b 85.782 _cell.length_c 63.871 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WNJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 42.858 85.782 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H10 O7' _chem_comp.formula_weight 302.236 _chem_comp.id QUE _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,7,3',4'-PENTAHYDROXYFLAVONE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUERCETIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 QUE doub 267 n y C1 C6 QUE sing 268 n y C1 H1 QUE sing 269 n n C2 C3 QUE sing 270 n y C2 O30 QUE sing 271 n n C3 C4 QUE doub 272 n y C3 C9 QUE sing 273 n y C4 C5 QUE sing 274 n y C4 O12 QUE sing 275 n y C5 C6 QUE doub 276 n y C5 H5 QUE sing 277 n n C6 O29 QUE sing 278 n n C9 C10 QUE sing 279 n y C9 O13 QUE doub 280 n n C10 C11 QUE doub 281 n y C10 O27 QUE sing 282 n n C11 C14 QUE sing 283 n y C11 O12 QUE sing 284 n y C14 C15 QUE doub 285 n y C14 C19 QUE sing 286 n y C15 C16 QUE sing 287 n y C15 H15 QUE sing 288 n n C16 C17 QUE doub 289 n y C16 H16 QUE sing 290 n n C17 C18 QUE sing 291 n y C17 O24 QUE sing 292 n n C18 C19 QUE doub 293 n y C18 O23 QUE sing 294 n n C19 H19 QUE sing 295 n n O23 HO3 QUE sing 296 n n O24 HO4 QUE sing 297 n n O27 HO7 QUE sing 298 n n O29 HO9 QUE sing 299 n n O30 HO0 QUE sing 300 n n # _atom_sites.entry_id 4WNJ _atom_sites.fract_transf_matrix[1][1] 0.023333 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011657 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 201 1 DMS DMS . D 3 QUE B 1 201 1 QUE QUE . E 2 DMS B 1 202 1 DMS DMS . F 4 HOH A 1 301 93 HOH HOH . F 4 HOH A 2 302 184 HOH HOH . F 4 HOH A 3 303 186 HOH HOH . F 4 HOH A 4 304 76 HOH HOH . F 4 HOH A 5 305 73 HOH HOH . F 4 HOH A 6 306 67 HOH HOH . F 4 HOH A 7 307 62 HOH HOH . F 4 HOH A 8 308 7 HOH HOH . F 4 HOH A 9 309 35 HOH HOH . F 4 HOH A 10 310 58 HOH HOH . F 4 HOH A 11 311 22 HOH HOH . F 4 HOH A 12 312 88 HOH HOH . F 4 HOH A 13 313 27 HOH HOH . F 4 HOH A 14 314 28 HOH HOH . F 4 HOH A 15 315 82 HOH HOH . F 4 HOH A 16 316 72 HOH HOH . F 4 HOH A 17 317 77 HOH HOH . F 4 HOH A 18 318 36 HOH HOH . F 4 HOH A 19 319 102 HOH HOH . F 4 HOH A 20 320 60 HOH HOH . F 4 HOH A 21 321 10 HOH HOH . F 4 HOH A 22 322 13 HOH HOH . F 4 HOH A 23 323 54 HOH HOH . F 4 HOH A 24 324 53 HOH HOH . F 4 HOH A 25 325 59 HOH HOH . F 4 HOH A 26 326 33 HOH HOH . F 4 HOH A 27 327 21 HOH HOH . F 4 HOH A 28 328 191 HOH HOH . F 4 HOH A 29 329 161 HOH HOH . F 4 HOH A 30 330 43 HOH HOH . F 4 HOH A 31 331 205 HOH HOH . F 4 HOH A 32 332 66 HOH HOH . F 4 HOH A 33 333 19 HOH HOH . F 4 HOH A 34 334 190 HOH HOH . F 4 HOH A 35 335 134 HOH HOH . F 4 HOH A 36 336 2 HOH HOH . F 4 HOH A 37 337 69 HOH HOH . F 4 HOH A 38 338 167 HOH HOH . F 4 HOH A 39 339 83 HOH HOH . F 4 HOH A 40 340 78 HOH HOH . F 4 HOH A 41 341 81 HOH HOH . F 4 HOH A 42 342 155 HOH HOH . F 4 HOH A 43 343 118 HOH HOH . F 4 HOH A 44 344 203 HOH HOH . F 4 HOH A 45 345 137 HOH HOH . F 4 HOH A 46 346 120 HOH HOH . F 4 HOH A 47 347 3 HOH HOH . F 4 HOH A 48 348 4 HOH HOH . F 4 HOH A 49 349 6 HOH HOH . F 4 HOH A 50 350 9 HOH HOH . F 4 HOH A 51 351 14 HOH HOH . F 4 HOH A 52 352 16 HOH HOH . F 4 HOH A 53 353 24 HOH HOH . F 4 HOH A 54 354 25 HOH HOH . F 4 HOH A 55 355 26 HOH HOH . F 4 HOH A 56 356 29 HOH HOH . F 4 HOH A 57 357 31 HOH HOH . F 4 HOH A 58 358 32 HOH HOH . F 4 HOH A 59 359 34 HOH HOH . F 4 HOH A 60 360 40 HOH HOH . F 4 HOH A 61 361 41 HOH HOH . F 4 HOH A 62 362 42 HOH HOH . F 4 HOH A 63 363 47 HOH HOH . F 4 HOH A 64 364 49 HOH HOH . F 4 HOH A 65 365 52 HOH HOH . F 4 HOH A 66 366 56 HOH HOH . F 4 HOH A 67 367 57 HOH HOH . F 4 HOH A 68 368 64 HOH HOH . F 4 HOH A 69 369 74 HOH HOH . F 4 HOH A 70 370 80 HOH HOH . F 4 HOH A 71 371 84 HOH HOH . F 4 HOH A 72 372 89 HOH HOH . F 4 HOH A 73 373 99 HOH HOH . F 4 HOH A 74 374 110 HOH HOH . F 4 HOH A 75 375 115 HOH HOH . F 4 HOH A 76 376 116 HOH HOH . F 4 HOH A 77 377 122 HOH HOH . F 4 HOH A 78 378 125 HOH HOH . F 4 HOH A 79 379 128 HOH HOH . F 4 HOH A 80 380 140 HOH HOH . F 4 HOH A 81 381 143 HOH HOH . F 4 HOH A 82 382 144 HOH HOH . F 4 HOH A 83 383 145 HOH HOH . F 4 HOH A 84 384 147 HOH HOH . F 4 HOH A 85 385 148 HOH HOH . F 4 HOH A 86 386 149 HOH HOH . F 4 HOH A 87 387 153 HOH HOH . F 4 HOH A 88 388 154 HOH HOH . F 4 HOH A 89 389 157 HOH HOH . F 4 HOH A 90 390 158 HOH HOH . F 4 HOH A 91 391 159 HOH HOH . F 4 HOH A 92 392 160 HOH HOH . F 4 HOH A 93 393 163 HOH HOH . F 4 HOH A 94 394 170 HOH HOH . F 4 HOH A 95 395 171 HOH HOH . F 4 HOH A 96 396 173 HOH HOH . F 4 HOH A 97 397 175 HOH HOH . F 4 HOH A 98 398 176 HOH HOH . F 4 HOH A 99 399 177 HOH HOH . F 4 HOH A 100 400 178 HOH HOH . F 4 HOH A 101 401 179 HOH HOH . F 4 HOH A 102 402 180 HOH HOH . F 4 HOH A 103 403 183 HOH HOH . F 4 HOH A 104 404 187 HOH HOH . F 4 HOH A 105 405 188 HOH HOH . F 4 HOH A 106 406 197 HOH HOH . F 4 HOH A 107 407 198 HOH HOH . F 4 HOH A 108 408 202 HOH HOH . G 4 HOH B 1 301 109 HOH HOH . G 4 HOH B 2 302 138 HOH HOH . G 4 HOH B 3 303 139 HOH HOH . G 4 HOH B 4 304 79 HOH HOH . G 4 HOH B 5 305 133 HOH HOH . G 4 HOH B 6 306 204 HOH HOH . G 4 HOH B 7 307 75 HOH HOH . G 4 HOH B 8 308 46 HOH HOH . G 4 HOH B 9 309 15 HOH HOH . G 4 HOH B 10 310 132 HOH HOH . G 4 HOH B 11 311 141 HOH HOH . G 4 HOH B 12 312 98 HOH HOH . G 4 HOH B 13 313 150 HOH HOH . G 4 HOH B 14 314 87 HOH HOH . G 4 HOH B 15 315 152 HOH HOH . G 4 HOH B 16 316 12 HOH HOH . G 4 HOH B 17 317 45 HOH HOH . G 4 HOH B 18 318 38 HOH HOH . G 4 HOH B 19 319 108 HOH HOH . G 4 HOH B 20 320 86 HOH HOH . G 4 HOH B 21 321 119 HOH HOH . G 4 HOH B 22 322 92 HOH HOH . G 4 HOH B 23 323 5 HOH HOH . G 4 HOH B 24 324 61 HOH HOH . G 4 HOH B 25 325 162 HOH HOH . G 4 HOH B 26 326 63 HOH HOH . G 4 HOH B 27 327 50 HOH HOH . G 4 HOH B 28 328 68 HOH HOH . G 4 HOH B 29 329 135 HOH HOH . G 4 HOH B 30 330 94 HOH HOH . G 4 HOH B 31 331 44 HOH HOH . G 4 HOH B 32 332 107 HOH HOH . G 4 HOH B 33 333 71 HOH HOH . G 4 HOH B 34 334 142 HOH HOH . G 4 HOH B 35 335 165 HOH HOH . G 4 HOH B 36 336 136 HOH HOH . G 4 HOH B 37 337 174 HOH HOH . G 4 HOH B 38 338 70 HOH HOH . G 4 HOH B 39 339 201 HOH HOH . G 4 HOH B 40 340 104 HOH HOH . G 4 HOH B 41 341 106 HOH HOH . G 4 HOH B 42 342 105 HOH HOH . G 4 HOH B 43 343 168 HOH HOH . G 4 HOH B 44 344 1 HOH HOH . G 4 HOH B 45 345 8 HOH HOH . G 4 HOH B 46 346 11 HOH HOH . G 4 HOH B 47 347 17 HOH HOH . G 4 HOH B 48 348 18 HOH HOH . G 4 HOH B 49 349 20 HOH HOH . G 4 HOH B 50 350 23 HOH HOH . G 4 HOH B 51 351 30 HOH HOH . G 4 HOH B 52 352 37 HOH HOH . G 4 HOH B 53 353 39 HOH HOH . G 4 HOH B 54 354 48 HOH HOH . G 4 HOH B 55 355 51 HOH HOH . G 4 HOH B 56 356 55 HOH HOH . G 4 HOH B 57 357 65 HOH HOH . G 4 HOH B 58 358 85 HOH HOH . G 4 HOH B 59 359 90 HOH HOH . G 4 HOH B 60 360 91 HOH HOH . G 4 HOH B 61 361 95 HOH HOH . G 4 HOH B 62 362 96 HOH HOH . G 4 HOH B 63 363 97 HOH HOH . G 4 HOH B 64 364 100 HOH HOH . G 4 HOH B 65 365 101 HOH HOH . G 4 HOH B 66 366 103 HOH HOH . G 4 HOH B 67 367 111 HOH HOH . G 4 HOH B 68 368 112 HOH HOH . G 4 HOH B 69 369 113 HOH HOH . G 4 HOH B 70 370 114 HOH HOH . G 4 HOH B 71 371 117 HOH HOH . G 4 HOH B 72 372 121 HOH HOH . G 4 HOH B 73 373 123 HOH HOH . G 4 HOH B 74 374 124 HOH HOH . G 4 HOH B 75 375 126 HOH HOH . G 4 HOH B 76 376 127 HOH HOH . G 4 HOH B 77 377 129 HOH HOH . G 4 HOH B 78 378 130 HOH HOH . G 4 HOH B 79 379 131 HOH HOH . G 4 HOH B 80 380 146 HOH HOH . G 4 HOH B 81 381 151 HOH HOH . G 4 HOH B 82 382 156 HOH HOH . G 4 HOH B 83 383 164 HOH HOH . G 4 HOH B 84 384 166 HOH HOH . G 4 HOH B 85 385 169 HOH HOH . G 4 HOH B 86 386 172 HOH HOH . G 4 HOH B 87 387 181 HOH HOH . G 4 HOH B 88 388 182 HOH HOH . G 4 HOH B 89 389 185 HOH HOH . G 4 HOH B 90 390 189 HOH HOH . G 4 HOH B 91 391 192 HOH HOH . G 4 HOH B 92 392 193 HOH HOH . G 4 HOH B 93 393 194 HOH HOH . G 4 HOH B 94 394 195 HOH HOH . G 4 HOH B 95 395 196 HOH HOH . G 4 HOH B 96 396 199 HOH HOH . G 4 HOH B 97 397 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QUE . . . D 3 20.628 43.306 62.134 0.48 38.67 ? C1 QUE 201 B 1 HETATM 2 C C2 QUE . . . D 3 21.456 42.452 61.412 0.48 38.93 ? C2 QUE 201 B 1 HETATM 3 C C3 QUE . . . D 3 21.583 42.567 60.03 0.48 38.52 ? C3 QUE 201 B 1 HETATM 4 C C4 QUE . . . D 3 20.859 43.541 59.366 0.48 38.24 ? C4 QUE 201 B 1 HETATM 5 C C5 QUE . . . D 3 20.016 44.395 60.081 0.48 38.77 ? C5 QUE 201 B 1 HETATM 6 C C6 QUE . . . D 3 19.898 44.281 61.464 0.48 38.96 ? C6 QUE 201 B 1 HETATM 7 C C9 QUE . . . D 3 22.382 41.691 59.319 0.48 39.01 ? C9 QUE 201 B 1 HETATM 8 C C10 QUE . . . D 3 22.416 41.84 57.934 0.48 38.45 ? C10 QUE 201 B 1 HETATM 9 C C11 QUE . . . D 3 21.745 42.857 57.247 0.48 36.13 ? C11 QUE 201 B 1 HETATM 10 C C14 QUE . . . D 3 21.743 43.111 55.854 0.48 33.33 ? C14 QUE 201 B 1 HETATM 11 C C15 QUE . . . D 3 21.849 42.032 54.976 0.48 32.42 ? C15 QUE 201 B 1 HETATM 12 C C16 QUE . . . D 3 21.759 42.183 53.598 0.48 31 ? C16 QUE 201 B 1 HETATM 13 C C17 QUE . . . D 3 21.462 43.425 53.059 0.48 29.56 ? C17 QUE 201 B 1 HETATM 14 C C18 QUE . . . D 3 21.266 44.523 53.898 0.48 28.24 ? C18 QUE 201 B 1 HETATM 15 C C19 QUE . . . D 3 21.32 44.325 55.286 0.48 30.91 ? C19 QUE 201 B 1 HETATM 16 O O12 QUE . . . D 3 20.959 43.659 58.006 0.48 37.55 ? O12 QUE 201 B 1 HETATM 17 O O13 QUE . . . D 3 23.011 40.795 59.889 0.48 39.84 ? O13 QUE 201 B 1 HETATM 18 O O23 QUE . . . D 3 20.976 45.748 53.307 0.48 23.48 ? O23 QUE 201 B 1 HETATM 19 O O24 QUE . . . D 3 21.356 43.6 51.714 0.48 30.92 ? O24 QUE 201 B 1 HETATM 20 O O27 QUE . . . D 3 23.198 40.977 57.236 0.48 39.32 ? O27 QUE 201 B 1 HETATM 21 O O29 QUE . . . D 3 19.073 45.125 62.147 0.48 39.63 ? O29 QUE 201 B 1 HETATM 22 O O30 QUE . . . D 3 22.191 41.479 62.011 0.48 39.34 ? O30 QUE 201 B 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #