data_4WO1
#
_model_server_result.job_id            JIg3RAlZoRU3Sef-ULQksA 
_model_server_result.datetime_utc      '2024-11-04 22:37:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wo1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    4WO1 
#
_exptl.entry_id    4WO1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4WO1 
_cell.length_a            50.797 
_cell.length_b            43.685 
_cell.length_c            50.605 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WO1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,J,K,L,O 1 1 
B,C,G,H,I,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 16 A ASP 23 1_555 E CA CA . A CA 101 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc2 A OD1 ASP 16 A ASP 23 1_555 E CA CA . A CA 101 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc3 A OD2 ASP 16 A ASP 23 1_555 E CA CA . A CA 101 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.482 ? 
metalc ? metalc4 E CA CA . A CA 101 1_555 L O HOH . A HOH 203 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc5 E CA CA . A CA 101 1_555 L O HOH . A HOH 203 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc6 E CA CA . A CA 101 1_555 L O HOH . A HOH 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.767 ? 
metalc ? metalc7 E CA CA . A CA 101 1_555 L O HOH . A HOH 205 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc8 E CA CA . A CA 101 1_555 B OD1 ASP 16 B ASP 23 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc9 E CA CA . A CA 101 1_555 B OD2 ASP 16 B ASP 23 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc10 E CA CA . A CA 101 1_555 B OD2 ASP 16 B ASP 23 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.789 ? 
metalc ? metalc11 E CA CA . A CA 101 1_555 M O HOH . B HOH 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.977 ? 
metalc ? metalc12 E CA CA . A CA 101 1_555 N O HOH . C HOH 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc13 E CA CA . A CA 101 1_555 N O HOH . C HOH 205 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc14 E CA CA . A CA 101 1_555 O O HOH . D HOH 205 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.291 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 139 n n 
C10 C9 OLC doub 140 n n 
C10 C11 OLC sing 141 n n 
C9 C8 OLC sing 142 n n 
C17 C16 OLC sing 143 z n 
C11 C12 OLC sing 144 n n 
C8 C7 OLC sing 145 n n 
C24 C22 OLC sing 146 n n 
C24 O25 OLC sing 147 n n 
C16 C15 OLC sing 148 n n 
C12 C13 OLC sing 149 n n 
C7 C6 OLC sing 150 n n 
C15 C14 OLC sing 151 n n 
C13 C14 OLC sing 152 n n 
C6 C5 OLC sing 153 n n 
C5 C4 OLC sing 154 n n 
C4 C3 OLC sing 155 n n 
C3 C2 OLC sing 156 n n 
C2 C1 OLC sing 157 n n 
C21 C22 OLC sing 158 n n 
C21 O20 OLC sing 159 n n 
C1 O19 OLC doub 160 n n 
C1 O20 OLC sing 161 n n 
C22 O23 OLC sing 162 n n 
C18 H18 OLC sing 163 n n 
C18 H18A OLC sing 164 n n 
C18 H18B OLC sing 165 n n 
C10 H10 OLC sing 166 n n 
C9 H9 OLC sing 167 n n 
C17 H17 OLC sing 168 n n 
C17 H17A OLC sing 169 n n 
C11 H11 OLC sing 170 n n 
C11 H11A OLC sing 171 n n 
C8 H8 OLC sing 172 n n 
C8 H8A OLC sing 173 n n 
C24 H24 OLC sing 174 n n 
C24 H24A OLC sing 175 n n 
C16 H16 OLC sing 176 n n 
C16 H16A OLC sing 177 n n 
C12 H12 OLC sing 178 n n 
C12 H12A OLC sing 179 n n 
C7 H7 OLC sing 180 n n 
C7 H7A OLC sing 181 n n 
C15 H15 OLC sing 182 n n 
C15 H15A OLC sing 183 n n 
C13 H13 OLC sing 184 n n 
C13 H13A OLC sing 185 n n 
C6 H6 OLC sing 186 n n 
C6 H6A OLC sing 187 n n 
C14 H14 OLC sing 188 n n 
C14 H14A OLC sing 189 n n 
C5 H5 OLC sing 190 n n 
C5 H5A OLC sing 191 n n 
C4 H4 OLC sing 192 n n 
C4 H4A OLC sing 193 n n 
C3 H3 OLC sing 194 n n 
C3 H3A OLC sing 195 n n 
C2 H2 OLC sing 196 n n 
C2 H2A OLC sing 197 n n 
C21 H21 OLC sing 198 n n 
C21 H21A OLC sing 199 n n 
C22 H22 OLC sing 200 n n 
O25 HO25 OLC sing 201 n n 
O23 HO23 OLC sing 202 n n 
#
_atom_sites.entry_id                     4WO1 
_atom_sites.fract_transf_matrix[1][1]    0.019686 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022891 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019761 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CA A 1 101 1 CA CA . 
F 3 OLC A 1 102 1 OLC OLC . 
G 3 OLC B 1 101 2 OLC OLC . 
H 3 OLC B 1 102 3 OLC OLC . 
I 3 OLC C 1 101 4 OLC OLC . 
J 3 OLC D 1 101 5 OLC OLC . 
K 3 OLC D 1 102 6 OLC OLC . 
L 4 HOH A 1 201 1 HOH HOH . 
L 4 HOH A 2 202 2 HOH HOH . 
L 4 HOH A 3 203 2 HOH HOH . 
L 4 HOH A 4 204 3 HOH HOH . 
L 4 HOH A 5 205 8 HOH HOH . 
L 4 HOH A 6 206 3 HOH HOH . 
L 4 HOH A 7 207 5 HOH HOH . 
L 4 HOH A 8 208 6 HOH HOH . 
M 4 HOH B 1 201 7 HOH HOH . 
M 4 HOH B 2 202 8 HOH HOH . 
M 4 HOH B 3 203 9 HOH HOH . 
M 4 HOH B 4 204 6 HOH HOH . 
N 4 HOH C 1 201 11 HOH HOH . 
N 4 HOH C 2 202 10 HOH HOH . 
N 4 HOH C 3 203 12 HOH HOH . 
N 4 HOH C 4 204 4 HOH HOH . 
N 4 HOH C 5 205 5 HOH HOH . 
N 4 HOH C 6 206 13 HOH HOH . 
N 4 HOH C 7 207 14 HOH HOH . 
N 4 HOH C 8 208 15 HOH HOH . 
N 4 HOH C 9 209 16 HOH HOH . 
N 4 HOH C 10 210 17 HOH HOH . 
N 4 HOH C 11 211 18 HOH HOH . 
O 4 HOH D 1 201 19 HOH HOH . 
O 4 HOH D 2 202 20 HOH HOH . 
O 4 HOH D 3 203 21 HOH HOH . 
O 4 HOH D 4 204 22 HOH HOH . 
O 4 HOH D 5 205 7 HOH HOH . 
O 4 HOH D 6 206 4 HOH HOH . 
O 4 HOH D 7 207 23 HOH HOH . 
O 4 HOH D 8 208 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . I 3 -23.162 8.21 -10.539 0.92 48.33 ? C18 OLC 101 C 1 
HETATM 2 C C10 OLC . . . I 3 -23.641 5.638 -18.633 0.92 65.35 ? C10 OLC 101 C 1 
HETATM 3 C C9 OLC . . . I 3 -24.053 4.391 -18.849 0.92 71.42 ? C9 OLC 101 C 1 
HETATM 4 C C17 OLC . . . I 3 -23.971 9.026 -11.536 0.92 47.33 ? C17 OLC 101 C 1 
HETATM 5 C C11 OLC . . . I 3 -23.511 6.184 -17.253 0.92 59.99 ? C11 OLC 101 C 1 
HETATM 6 C C8 OLC . . . I 3 -24.409 3.47 -17.723 0.92 82.51 ? C8 OLC 101 C 1 
HETATM 7 C C24 OLC . . . I 3 -24.918 -1.974 -12.538 0.92 101.18 ? C24 OLC 101 C 1 
HETATM 8 C C16 OLC . . . I 3 -23.464 8.748 -12.944 0.92 49.18 ? C16 OLC 101 C 1 
HETATM 9 C C12 OLC . . . I 3 -24.654 7.141 -16.96 0.92 52.34 ? C12 OLC 101 C 1 
HETATM 10 C C7 OLC . . . I 3 -25.747 2.775 -17.996 0.92 94.75 ? C7 OLC 101 C 1 
HETATM 11 C C15 OLC . . . I 3 -24.253 9.518 -14.003 0.92 48.44 ? C15 OLC 101 C 1 
HETATM 12 C C13 OLC . . . I 3 -24.581 7.549 -15.5 0.92 49.47 ? C13 OLC 101 C 1 
HETATM 13 C C6 OLC . . . I 3 -25.818 2.382 -19.467 0.92 100.34 ? C6 OLC 101 C 1 
HETATM 14 C C14 OLC . . . I 3 -23.934 8.919 -15.374 0.92 47.43 ? C14 OLC 101 C 1 
HETATM 15 C C5 OLC . . . I 3 -26.326 0.964 -19.623 0.92 102.38 ? C5 OLC 101 C 1 
HETATM 16 C C4 OLC . . . I 3 -25.168 0.048 -20.023 0.46 103.1 ? C4 OLC 101 C 1 
HETATM 17 C C3 OLC . . . I 3 -25.456 -1.366 -19.532 0.92 102.35 ? C3 OLC 101 C 1 
HETATM 18 C C2 OLC . . . I 3 -24.436 -1.832 -18.486 0.92 101.74 ? C2 OLC 101 C 1 
HETATM 19 C C21 OLC . . . I 3 -24.572 -1.507 -14.933 0.92 109.82 ? C21 OLC 101 C 1 
HETATM 20 C C1 OLC . . . I 3 -24.983 -1.398 -17.17 0.92 111.02 ? C1 OLC 101 C 1 
HETATM 21 C C22 OLC . . . I 3 -25.521 -2.171 -13.946 0.92 106.28 ? C22 OLC 101 C 1 
HETATM 22 O O19 OLC . . . I 3 -25.638 -0.39 -16.944 0.92 116.84 ? O19 OLC 101 C 1 
HETATM 23 O O25 OLC . . . I 3 -25.727 -1.009 -11.95 0.92 99.27 ? O25 OLC 101 C 1 
HETATM 24 O O23 OLC . . . I 3 -26.789 -1.62 -14.039 0.92 105.91 ? O23 OLC 101 C 1 
HETATM 25 O O20 OLC . . . I 3 -24.708 -2.227 -16.135 0.92 111.83 ? O20 OLC 101 C 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           25 
#