data_4WPL
#
_model_server_result.job_id            HH3ug4ow2KROW11uIHk3Nw 
_model_server_result.datetime_utc      '2024-11-24 00:48:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wpl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    4WPL 
#
_exptl.entry_id    4WPL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.23 
_cell.angle_gamma         90 
_cell.entry_id            4WPL 
_cell.length_a            38.91 
_cell.length_b            63.9 
_cell.length_c            45.08 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WPL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 89 n n 
S C1 DMS sing 90 n n 
S C2 DMS sing 91 n n 
C1 H11 DMS sing 92 n n 
C1 H12 DMS sing 93 n n 
C1 H13 DMS sing 94 n n 
C2 H21 DMS sing 95 n n 
C2 H22 DMS sing 96 n n 
C2 H23 DMS sing 97 n n 
#
_atom_sites.entry_id                     4WPL 
_atom_sites.fract_transf_matrix[1][1]    0.0257 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.010504 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015649 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023964 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 URA A 1 301 1 URA URA . 
C 3 DMS A 1 302 1 DMS DMS . 
D 3 DMS A 1 303 2 DMS DMS . 
E 3 DMS A 1 304 3 DMS DMS . 
F 4 ACT A 1 305 1 ACT ACT . 
G 5 GOL A 1 306 1 GOL GOL . 
H 5 GOL A 1 307 2 GOL GOL . 
I 5 GOL A 1 308 4 GOL GOL . 
J 5 GOL A 1 309 6 GOL GOL . 
K 5 GOL A 1 310 7 GOL GOL . 
L 6 CL A 1 311 2 CL CL . 
M 7 HOH A 1 401 67 HOH HOH . 
M 7 HOH A 2 402 145 HOH HOH . 
M 7 HOH A 3 403 24 HOH HOH . 
M 7 HOH A 4 404 113 HOH HOH . 
M 7 HOH A 5 405 103 HOH HOH . 
M 7 HOH A 6 406 158 HOH HOH . 
M 7 HOH A 7 407 108 HOH HOH . 
M 7 HOH A 8 408 98 HOH HOH . 
M 7 HOH A 9 409 191 HOH HOH . 
M 7 HOH A 10 410 99 HOH HOH . 
M 7 HOH A 11 411 129 HOH HOH . 
M 7 HOH A 12 412 96 HOH HOH . 
M 7 HOH A 13 413 62 HOH HOH . 
M 7 HOH A 14 414 27 HOH HOH . 
M 7 HOH A 15 415 38 HOH HOH . 
M 7 HOH A 16 416 235 HOH HOH . 
M 7 HOH A 17 417 210 HOH HOH . 
M 7 HOH A 18 418 107 HOH HOH . 
M 7 HOH A 19 419 150 HOH HOH . 
M 7 HOH A 20 420 63 HOH HOH . 
M 7 HOH A 21 421 94 HOH HOH . 
M 7 HOH A 22 422 51 HOH HOH . 
M 7 HOH A 23 423 171 HOH HOH . 
M 7 HOH A 24 424 74 HOH HOH . 
M 7 HOH A 25 425 9 HOH HOH . 
M 7 HOH A 26 426 100 HOH HOH . 
M 7 HOH A 27 427 175 HOH HOH . 
M 7 HOH A 28 428 53 HOH HOH . 
M 7 HOH A 29 429 57 HOH HOH . 
M 7 HOH A 30 430 66 HOH HOH . 
M 7 HOH A 31 431 26 HOH HOH . 
M 7 HOH A 32 432 59 HOH HOH . 
M 7 HOH A 33 433 256 HOH HOH . 
M 7 HOH A 34 434 50 HOH HOH . 
M 7 HOH A 35 435 7 HOH HOH . 
M 7 HOH A 36 436 116 HOH HOH . 
M 7 HOH A 37 437 134 HOH HOH . 
M 7 HOH A 38 438 92 HOH HOH . 
M 7 HOH A 39 439 28 HOH HOH . 
M 7 HOH A 40 440 77 HOH HOH . 
M 7 HOH A 41 441 49 HOH HOH . 
M 7 HOH A 42 442 106 HOH HOH . 
M 7 HOH A 43 443 222 HOH HOH . 
M 7 HOH A 44 444 105 HOH HOH . 
M 7 HOH A 45 445 86 HOH HOH . 
M 7 HOH A 46 446 89 HOH HOH . 
M 7 HOH A 47 447 31 HOH HOH . 
M 7 HOH A 48 448 44 HOH HOH . 
M 7 HOH A 49 449 60 HOH HOH . 
M 7 HOH A 50 450 33 HOH HOH . 
M 7 HOH A 51 451 120 HOH HOH . 
M 7 HOH A 52 452 75 HOH HOH . 
M 7 HOH A 53 453 52 HOH HOH . 
M 7 HOH A 54 454 25 HOH HOH . 
M 7 HOH A 55 455 54 HOH HOH . 
M 7 HOH A 56 456 124 HOH HOH . 
M 7 HOH A 57 457 81 HOH HOH . 
M 7 HOH A 58 458 76 HOH HOH . 
M 7 HOH A 59 459 151 HOH HOH . 
M 7 HOH A 60 460 102 HOH HOH . 
M 7 HOH A 61 461 189 HOH HOH . 
M 7 HOH A 62 462 64 HOH HOH . 
M 7 HOH A 63 463 153 HOH HOH . 
M 7 HOH A 64 464 131 HOH HOH . 
M 7 HOH A 65 465 152 HOH HOH . 
M 7 HOH A 66 466 78 HOH HOH . 
M 7 HOH A 67 467 32 HOH HOH . 
M 7 HOH A 68 468 97 HOH HOH . 
M 7 HOH A 69 469 43 HOH HOH . 
M 7 HOH A 70 470 37 HOH HOH . 
M 7 HOH A 71 471 173 HOH HOH . 
M 7 HOH A 72 472 125 HOH HOH . 
M 7 HOH A 73 473 242 HOH HOH . 
M 7 HOH A 74 474 224 HOH HOH . 
M 7 HOH A 75 475 190 HOH HOH . 
M 7 HOH A 76 476 225 HOH HOH . 
M 7 HOH A 77 477 234 HOH HOH . 
M 7 HOH A 78 478 183 HOH HOH . 
M 7 HOH A 79 479 236 HOH HOH . 
M 7 HOH A 80 480 167 HOH HOH . 
M 7 HOH A 81 481 138 HOH HOH . 
M 7 HOH A 82 482 243 HOH HOH . 
M 7 HOH A 83 483 226 HOH HOH . 
M 7 HOH A 84 484 199 HOH HOH . 
M 7 HOH A 85 485 208 HOH HOH . 
M 7 HOH A 86 486 195 HOH HOH . 
M 7 HOH A 87 487 168 HOH HOH . 
M 7 HOH A 88 488 216 HOH HOH . 
M 7 HOH A 89 489 88 HOH HOH . 
M 7 HOH A 90 490 149 HOH HOH . 
M 7 HOH A 91 491 133 HOH HOH . 
M 7 HOH A 92 492 117 HOH HOH . 
M 7 HOH A 93 493 188 HOH HOH . 
M 7 HOH A 94 494 111 HOH HOH . 
M 7 HOH A 95 495 160 HOH HOH . 
M 7 HOH A 96 496 227 HOH HOH . 
M 7 HOH A 97 497 215 HOH HOH . 
M 7 HOH A 98 498 261 HOH HOH . 
M 7 HOH A 99 499 193 HOH HOH . 
M 7 HOH A 100 500 128 HOH HOH . 
M 7 HOH A 101 501 181 HOH HOH . 
M 7 HOH A 102 502 228 HOH HOH . 
M 7 HOH A 103 503 114 HOH HOH . 
M 7 HOH A 104 504 115 HOH HOH . 
M 7 HOH A 105 505 144 HOH HOH . 
M 7 HOH A 106 506 245 HOH HOH . 
M 7 HOH A 107 507 135 HOH HOH . 
M 7 HOH A 108 508 206 HOH HOH . 
M 7 HOH A 109 509 123 HOH HOH . 
M 7 HOH A 110 510 250 HOH HOH . 
M 7 HOH A 111 511 212 HOH HOH . 
M 7 HOH A 112 512 253 HOH HOH . 
M 7 HOH A 113 513 73 HOH HOH . 
M 7 HOH A 114 514 155 HOH HOH . 
M 7 HOH A 115 515 230 HOH HOH . 
M 7 HOH A 116 516 148 HOH HOH . 
M 7 HOH A 117 517 249 HOH HOH . 
M 7 HOH A 118 518 165 HOH HOH . 
M 7 HOH A 119 519 238 HOH HOH . 
M 7 HOH A 120 520 147 HOH HOH . 
M 7 HOH A 121 521 163 HOH HOH . 
M 7 HOH A 122 522 251 HOH HOH . 
M 7 HOH A 123 523 156 HOH HOH . 
M 7 HOH A 124 524 218 HOH HOH . 
M 7 HOH A 125 525 204 HOH HOH . 
M 7 HOH A 126 526 257 HOH HOH . 
M 7 HOH A 127 527 176 HOH HOH . 
M 7 HOH A 128 528 201 HOH HOH . 
M 7 HOH A 129 529 1 HOH HOH . 
M 7 HOH A 130 530 2 HOH HOH . 
M 7 HOH A 131 531 3 HOH HOH . 
M 7 HOH A 132 532 4 HOH HOH . 
M 7 HOH A 133 533 5 HOH HOH . 
M 7 HOH A 134 534 6 HOH HOH . 
M 7 HOH A 135 535 8 HOH HOH . 
M 7 HOH A 136 536 10 HOH HOH . 
M 7 HOH A 137 537 11 HOH HOH . 
M 7 HOH A 138 538 12 HOH HOH . 
M 7 HOH A 139 539 13 HOH HOH . 
M 7 HOH A 140 540 14 HOH HOH . 
M 7 HOH A 141 541 15 HOH HOH . 
M 7 HOH A 142 542 16 HOH HOH . 
M 7 HOH A 143 543 17 HOH HOH . 
M 7 HOH A 144 544 18 HOH HOH . 
M 7 HOH A 145 545 19 HOH HOH . 
M 7 HOH A 146 546 20 HOH HOH . 
M 7 HOH A 147 547 21 HOH HOH . 
M 7 HOH A 148 548 22 HOH HOH . 
M 7 HOH A 149 549 23 HOH HOH . 
M 7 HOH A 150 550 29 HOH HOH . 
M 7 HOH A 151 551 30 HOH HOH . 
M 7 HOH A 152 552 34 HOH HOH . 
M 7 HOH A 153 553 35 HOH HOH . 
M 7 HOH A 154 554 36 HOH HOH . 
M 7 HOH A 155 555 39 HOH HOH . 
M 7 HOH A 156 556 40 HOH HOH . 
M 7 HOH A 157 557 41 HOH HOH . 
M 7 HOH A 158 558 42 HOH HOH . 
M 7 HOH A 159 559 45 HOH HOH . 
M 7 HOH A 160 560 46 HOH HOH . 
M 7 HOH A 161 561 47 HOH HOH . 
M 7 HOH A 162 562 48 HOH HOH . 
M 7 HOH A 163 563 55 HOH HOH . 
M 7 HOH A 164 564 56 HOH HOH . 
M 7 HOH A 165 565 58 HOH HOH . 
M 7 HOH A 166 566 61 HOH HOH . 
M 7 HOH A 167 567 65 HOH HOH . 
M 7 HOH A 168 568 68 HOH HOH . 
M 7 HOH A 169 569 69 HOH HOH . 
M 7 HOH A 170 570 70 HOH HOH . 
M 7 HOH A 171 571 71 HOH HOH . 
M 7 HOH A 172 572 72 HOH HOH . 
M 7 HOH A 173 573 79 HOH HOH . 
M 7 HOH A 174 574 80 HOH HOH . 
M 7 HOH A 175 575 82 HOH HOH . 
M 7 HOH A 176 576 83 HOH HOH . 
M 7 HOH A 177 577 84 HOH HOH . 
M 7 HOH A 178 578 85 HOH HOH . 
M 7 HOH A 179 579 87 HOH HOH . 
M 7 HOH A 180 580 90 HOH HOH . 
M 7 HOH A 181 581 91 HOH HOH . 
M 7 HOH A 182 582 93 HOH HOH . 
M 7 HOH A 183 583 95 HOH HOH . 
M 7 HOH A 184 584 101 HOH HOH . 
M 7 HOH A 185 585 104 HOH HOH . 
M 7 HOH A 186 586 109 HOH HOH . 
M 7 HOH A 187 587 110 HOH HOH . 
M 7 HOH A 188 588 112 HOH HOH . 
M 7 HOH A 189 589 118 HOH HOH . 
M 7 HOH A 190 590 119 HOH HOH . 
M 7 HOH A 191 591 122 HOH HOH . 
M 7 HOH A 192 592 126 HOH HOH . 
M 7 HOH A 193 593 127 HOH HOH . 
M 7 HOH A 194 594 130 HOH HOH . 
M 7 HOH A 195 595 132 HOH HOH . 
M 7 HOH A 196 596 137 HOH HOH . 
M 7 HOH A 197 597 139 HOH HOH . 
M 7 HOH A 198 598 141 HOH HOH . 
M 7 HOH A 199 599 142 HOH HOH . 
M 7 HOH A 200 600 143 HOH HOH . 
M 7 HOH A 201 601 146 HOH HOH . 
M 7 HOH A 202 602 154 HOH HOH . 
M 7 HOH A 203 603 157 HOH HOH . 
M 7 HOH A 204 604 159 HOH HOH . 
M 7 HOH A 205 605 161 HOH HOH . 
M 7 HOH A 206 606 162 HOH HOH . 
M 7 HOH A 207 607 164 HOH HOH . 
M 7 HOH A 208 608 169 HOH HOH . 
M 7 HOH A 209 609 172 HOH HOH . 
M 7 HOH A 210 610 174 HOH HOH . 
M 7 HOH A 211 611 178 HOH HOH . 
M 7 HOH A 212 612 180 HOH HOH . 
M 7 HOH A 213 613 182 HOH HOH . 
M 7 HOH A 214 614 184 HOH HOH . 
M 7 HOH A 215 615 187 HOH HOH . 
M 7 HOH A 216 616 192 HOH HOH . 
M 7 HOH A 217 617 194 HOH HOH . 
M 7 HOH A 218 618 196 HOH HOH . 
M 7 HOH A 219 619 197 HOH HOH . 
M 7 HOH A 220 620 198 HOH HOH . 
M 7 HOH A 221 621 207 HOH HOH . 
M 7 HOH A 222 622 209 HOH HOH . 
M 7 HOH A 223 623 213 HOH HOH . 
M 7 HOH A 224 624 217 HOH HOH . 
M 7 HOH A 225 625 221 HOH HOH . 
M 7 HOH A 226 626 223 HOH HOH . 
M 7 HOH A 227 627 229 HOH HOH . 
M 7 HOH A 228 628 231 HOH HOH . 
M 7 HOH A 229 629 232 HOH HOH . 
M 7 HOH A 230 630 233 HOH HOH . 
M 7 HOH A 231 631 237 HOH HOH . 
M 7 HOH A 232 632 239 HOH HOH . 
M 7 HOH A 233 633 240 HOH HOH . 
M 7 HOH A 234 634 241 HOH HOH . 
M 7 HOH A 235 635 246 HOH HOH . 
M 7 HOH A 236 636 252 HOH HOH . 
M 7 HOH A 237 637 254 HOH HOH . 
M 7 HOH A 238 638 255 HOH HOH . 
M 7 HOH A 239 639 258 HOH HOH . 
M 7 HOH A 240 640 259 HOH HOH . 
M 7 HOH A 241 641 260 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . E 3 22.584 -2.739 38.353 1 17.6 ? S DMS 304 A 1 
HETATM 2 O O DMS . . . E 3 21.544 -3.405 38.92 1 23.93 ? O DMS 304 A 1 
HETATM 3 C C1 DMS . . . E 3 23.767 -3.942 38.392 1 14.22 ? C1 DMS 304 A 1 
HETATM 4 C C2 DMS . . . E 3 22.1 -2.957 36.697 1 15.41 ? C2 DMS 304 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           360 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#