data_4WQ8 # _model_server_result.job_id xFmBzBN5VhguNwS-mNUQZQ _model_server_result.datetime_utc '2025-03-06 09:16:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1004}' # _entry.id 4WQ8 # _exptl.entry_id 4WQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 129.2 _cell.angle_gamma 90 _cell.entry_id 4WQ8 _cell.length_a 79.03 _cell.length_b 70.125 _cell.length_c 57.723 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 49 A CYS 49 1_555 B CAB HEC . A HEC 1001 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.732 ? covale ? covale2 A SG CYS 49 A CYS 49 1_555 B CAB HEC . A HEC 1001 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.654 ? covale ? covale3 A SG CYS 52 A CYS 52 1_555 B CAC HEC . A HEC 1001 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.863 ? covale ? covale4 A SG CYS 52 A CYS 52 1_555 B CAC HEC . A HEC 1001 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.903 ? covale ? covale5 A C ASP 95 A ASP 95 1_555 A N CSD 96 A CSD 96 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C ASP 95 A ASP 95 1_555 A N CSS 96 A CSS 96 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C CSD 96 A CSD 96 1_555 A N PHE 97 A PHE 97 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C CSS 96 A CSS 96 1_555 A N PHE 97 A PHE 97 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A SG CYS 160 A CYS 160 1_555 C CAB HEC . A HEC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.728 ? metalc ? metalc1 A NE2 HIS 53 A HIS 53 1_555 B FE HEC . A HEC 1001 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 A NE2 HIS 53 A HIS 53 1_555 B FE HEC . A HEC 1001 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.043 ? metalc ? metalc3 A SD CSS 96 A CSS 96 1_555 B FE HEC . A HEC 1001 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.216 ? metalc ? metalc4 A NE2 HIS 164 A HIS 164 1_555 C FE HEC . A HEC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc5 A NZ LYS 208 A LYS 208 1_555 C FE HEC . A HEC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4WQ8 _atom_sites.fract_transf_matrix[1][1] 0.012653 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.01032 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 1001 1001 HEC HEC . C 2 HEC A 1 1002 1002 HEC HEC . D 3 IOD A 1 1003 2001 IOD IOD . E 3 IOD A 1 1004 2002 IOD IOD . F 4 SO4 A 1 1005 3001 SO4 SO4 . G 5 HOH A 1 1101 232 HOH HOH . G 5 HOH A 2 1102 160 HOH HOH . G 5 HOH A 3 1103 179 HOH HOH . G 5 HOH A 4 1104 61 HOH HOH . G 5 HOH A 5 1105 108 HOH HOH . G 5 HOH A 6 1106 173 HOH HOH . G 5 HOH A 7 1107 201 HOH HOH . G 5 HOH A 8 1108 185 HOH HOH . G 5 HOH A 9 1109 33 HOH HOH . G 5 HOH A 10 1110 187 HOH HOH . G 5 HOH A 11 1111 126 HOH HOH . G 5 HOH A 12 1112 164 HOH HOH . G 5 HOH A 13 1113 230 HOH HOH . G 5 HOH A 14 1114 130 HOH HOH . G 5 HOH A 15 1115 34 HOH HOH . G 5 HOH A 16 1116 86 HOH HOH . G 5 HOH A 17 1117 32 HOH HOH . G 5 HOH A 18 1118 17 HOH HOH . G 5 HOH A 19 1119 157 HOH HOH . G 5 HOH A 20 1120 125 HOH HOH . G 5 HOH A 21 1121 28 HOH HOH . G 5 HOH A 22 1122 19 HOH HOH . G 5 HOH A 23 1123 107 HOH HOH . G 5 HOH A 24 1124 170 HOH HOH . G 5 HOH A 25 1125 63 HOH HOH . G 5 HOH A 26 1126 93 HOH HOH . G 5 HOH A 27 1127 52 HOH HOH . G 5 HOH A 28 1128 24 HOH HOH . G 5 HOH A 29 1129 83 HOH HOH . G 5 HOH A 30 1130 55 HOH HOH . G 5 HOH A 31 1131 87 HOH HOH . G 5 HOH A 32 1132 71 HOH HOH . G 5 HOH A 33 1133 7 HOH HOH . G 5 HOH A 34 1134 119 HOH HOH . G 5 HOH A 35 1135 202 HOH HOH . G 5 HOH A 36 1136 211 HOH HOH . G 5 HOH A 37 1137 208 HOH HOH . G 5 HOH A 38 1138 138 HOH HOH . G 5 HOH A 39 1139 176 HOH HOH . G 5 HOH A 40 1140 5 HOH HOH . G 5 HOH A 41 1141 128 HOH HOH . G 5 HOH A 42 1142 99 HOH HOH . G 5 HOH A 43 1143 163 HOH HOH . G 5 HOH A 44 1144 4 HOH HOH . G 5 HOH A 45 1145 152 HOH HOH . G 5 HOH A 46 1146 120 HOH HOH . G 5 HOH A 47 1147 45 HOH HOH . G 5 HOH A 48 1148 64 HOH HOH . G 5 HOH A 49 1149 6 HOH HOH . G 5 HOH A 50 1150 156 HOH HOH . G 5 HOH A 51 1151 147 HOH HOH . G 5 HOH A 52 1152 26 HOH HOH . G 5 HOH A 53 1153 111 HOH HOH . G 5 HOH A 54 1154 27 HOH HOH . G 5 HOH A 55 1155 53 HOH HOH . G 5 HOH A 56 1156 13 HOH HOH . G 5 HOH A 57 1157 3 HOH HOH . G 5 HOH A 58 1158 56 HOH HOH . G 5 HOH A 59 1159 215 HOH HOH . G 5 HOH A 60 1160 95 HOH HOH . G 5 HOH A 61 1161 77 HOH HOH . G 5 HOH A 62 1162 174 HOH HOH . G 5 HOH A 63 1163 195 HOH HOH . G 5 HOH A 64 1164 103 HOH HOH . G 5 HOH A 65 1165 110 HOH HOH . G 5 HOH A 66 1166 100 HOH HOH . G 5 HOH A 67 1167 196 HOH HOH . G 5 HOH A 68 1168 223 HOH HOH . G 5 HOH A 69 1169 212 HOH HOH . G 5 HOH A 70 1170 85 HOH HOH . G 5 HOH A 71 1171 184 HOH HOH . G 5 HOH A 72 1172 229 HOH HOH . G 5 HOH A 73 1173 150 HOH HOH . G 5 HOH A 74 1174 222 HOH HOH . G 5 HOH A 75 1175 220 HOH HOH . G 5 HOH A 76 1176 181 HOH HOH . G 5 HOH A 77 1177 121 HOH HOH . G 5 HOH A 78 1178 155 HOH HOH . G 5 HOH A 79 1179 216 HOH HOH . G 5 HOH A 80 1180 68 HOH HOH . G 5 HOH A 81 1181 159 HOH HOH . G 5 HOH A 82 1182 134 HOH HOH . G 5 HOH A 83 1183 96 HOH HOH . G 5 HOH A 84 1184 116 HOH HOH . G 5 HOH A 85 1185 139 HOH HOH . G 5 HOH A 86 1186 225 HOH HOH . G 5 HOH A 87 1187 151 HOH HOH . G 5 HOH A 88 1188 123 HOH HOH . G 5 HOH A 89 1189 1 HOH HOH . G 5 HOH A 90 1190 2 HOH HOH . G 5 HOH A 91 1191 8 HOH HOH . G 5 HOH A 92 1192 9 HOH HOH . G 5 HOH A 93 1193 10 HOH HOH . G 5 HOH A 94 1194 11 HOH HOH . G 5 HOH A 95 1195 12 HOH HOH . G 5 HOH A 96 1196 14 HOH HOH . G 5 HOH A 97 1197 15 HOH HOH . G 5 HOH A 98 1198 16 HOH HOH . G 5 HOH A 99 1199 18 HOH HOH . G 5 HOH A 100 1200 20 HOH HOH . G 5 HOH A 101 1201 21 HOH HOH . G 5 HOH A 102 1202 22 HOH HOH . G 5 HOH A 103 1203 23 HOH HOH . G 5 HOH A 104 1204 25 HOH HOH . G 5 HOH A 105 1205 29 HOH HOH . G 5 HOH A 106 1206 30 HOH HOH . G 5 HOH A 107 1207 31 HOH HOH . G 5 HOH A 108 1208 35 HOH HOH . G 5 HOH A 109 1209 36 HOH HOH . G 5 HOH A 110 1210 37 HOH HOH . G 5 HOH A 111 1211 38 HOH HOH . G 5 HOH A 112 1212 39 HOH HOH . G 5 HOH A 113 1213 40 HOH HOH . G 5 HOH A 114 1214 41 HOH HOH . G 5 HOH A 115 1215 42 HOH HOH . G 5 HOH A 116 1216 43 HOH HOH . G 5 HOH A 117 1217 44 HOH HOH . G 5 HOH A 118 1218 46 HOH HOH . G 5 HOH A 119 1219 47 HOH HOH . G 5 HOH A 120 1220 48 HOH HOH . G 5 HOH A 121 1221 49 HOH HOH . G 5 HOH A 122 1222 50 HOH HOH . G 5 HOH A 123 1223 51 HOH HOH . G 5 HOH A 124 1224 54 HOH HOH . G 5 HOH A 125 1225 57 HOH HOH . G 5 HOH A 126 1226 58 HOH HOH . G 5 HOH A 127 1227 59 HOH HOH . G 5 HOH A 128 1228 60 HOH HOH . G 5 HOH A 129 1229 62 HOH HOH . G 5 HOH A 130 1230 65 HOH HOH . G 5 HOH A 131 1231 66 HOH HOH . G 5 HOH A 132 1232 67 HOH HOH . G 5 HOH A 133 1233 69 HOH HOH . G 5 HOH A 134 1234 70 HOH HOH . G 5 HOH A 135 1235 72 HOH HOH . G 5 HOH A 136 1236 73 HOH HOH . G 5 HOH A 137 1237 74 HOH HOH . G 5 HOH A 138 1238 75 HOH HOH . G 5 HOH A 139 1239 76 HOH HOH . G 5 HOH A 140 1240 78 HOH HOH . G 5 HOH A 141 1241 79 HOH HOH . G 5 HOH A 142 1242 80 HOH HOH . G 5 HOH A 143 1243 81 HOH HOH . G 5 HOH A 144 1244 82 HOH HOH . G 5 HOH A 145 1245 84 HOH HOH . G 5 HOH A 146 1246 88 HOH HOH . G 5 HOH A 147 1247 89 HOH HOH . G 5 HOH A 148 1248 90 HOH HOH . G 5 HOH A 149 1249 91 HOH HOH . G 5 HOH A 150 1250 92 HOH HOH . G 5 HOH A 151 1251 94 HOH HOH . G 5 HOH A 152 1252 97 HOH HOH . G 5 HOH A 153 1253 98 HOH HOH . G 5 HOH A 154 1254 101 HOH HOH . G 5 HOH A 155 1255 102 HOH HOH . G 5 HOH A 156 1256 104 HOH HOH . G 5 HOH A 157 1257 105 HOH HOH . G 5 HOH A 158 1258 106 HOH HOH . G 5 HOH A 159 1259 109 HOH HOH . G 5 HOH A 160 1260 112 HOH HOH . G 5 HOH A 161 1261 113 HOH HOH . G 5 HOH A 162 1262 114 HOH HOH . G 5 HOH A 163 1263 115 HOH HOH . G 5 HOH A 164 1264 117 HOH HOH . G 5 HOH A 165 1265 118 HOH HOH . G 5 HOH A 166 1266 122 HOH HOH . G 5 HOH A 167 1267 124 HOH HOH . G 5 HOH A 168 1268 127 HOH HOH . G 5 HOH A 169 1269 129 HOH HOH . G 5 HOH A 170 1270 131 HOH HOH . G 5 HOH A 171 1271 132 HOH HOH . G 5 HOH A 172 1272 133 HOH HOH . G 5 HOH A 173 1273 135 HOH HOH . G 5 HOH A 174 1274 136 HOH HOH . G 5 HOH A 175 1275 137 HOH HOH . G 5 HOH A 176 1276 140 HOH HOH . G 5 HOH A 177 1277 141 HOH HOH . G 5 HOH A 178 1278 142 HOH HOH . G 5 HOH A 179 1279 143 HOH HOH . G 5 HOH A 180 1280 145 HOH HOH . G 5 HOH A 181 1281 146 HOH HOH . G 5 HOH A 182 1282 148 HOH HOH . G 5 HOH A 183 1283 149 HOH HOH . G 5 HOH A 184 1284 153 HOH HOH . G 5 HOH A 185 1285 154 HOH HOH . G 5 HOH A 186 1286 158 HOH HOH . G 5 HOH A 187 1287 161 HOH HOH . G 5 HOH A 188 1288 162 HOH HOH . G 5 HOH A 189 1289 165 HOH HOH . G 5 HOH A 190 1290 166 HOH HOH . G 5 HOH A 191 1291 167 HOH HOH . G 5 HOH A 192 1292 168 HOH HOH . G 5 HOH A 193 1293 169 HOH HOH . G 5 HOH A 194 1294 172 HOH HOH . G 5 HOH A 195 1295 175 HOH HOH . G 5 HOH A 196 1296 177 HOH HOH . G 5 HOH A 197 1297 178 HOH HOH . G 5 HOH A 198 1298 180 HOH HOH . G 5 HOH A 199 1299 182 HOH HOH . G 5 HOH A 200 1300 183 HOH HOH . G 5 HOH A 201 1301 186 HOH HOH . G 5 HOH A 202 1302 188 HOH HOH . G 5 HOH A 203 1303 189 HOH HOH . G 5 HOH A 204 1304 190 HOH HOH . G 5 HOH A 205 1305 191 HOH HOH . G 5 HOH A 206 1306 192 HOH HOH . G 5 HOH A 207 1307 193 HOH HOH . G 5 HOH A 208 1308 194 HOH HOH . G 5 HOH A 209 1309 197 HOH HOH . G 5 HOH A 210 1310 198 HOH HOH . G 5 HOH A 211 1311 199 HOH HOH . G 5 HOH A 212 1312 200 HOH HOH . G 5 HOH A 213 1313 203 HOH HOH . G 5 HOH A 214 1314 204 HOH HOH . G 5 HOH A 215 1315 205 HOH HOH . G 5 HOH A 216 1316 206 HOH HOH . G 5 HOH A 217 1317 209 HOH HOH . G 5 HOH A 218 1318 210 HOH HOH . G 5 HOH A 219 1319 213 HOH HOH . G 5 HOH A 220 1320 214 HOH HOH . G 5 HOH A 221 1321 217 HOH HOH . G 5 HOH A 222 1322 218 HOH HOH . G 5 HOH A 223 1323 221 HOH HOH . G 5 HOH A 224 1324 226 HOH HOH . G 5 HOH A 225 1325 227 HOH HOH . G 5 HOH A 226 1326 231 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 24.627 _atom_site.Cartn_y 0.445 _atom_site.Cartn_z -7.869 _atom_site.occupancy 0.27 _atom_site.B_iso_or_equiv 34.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #