data_4WQL # _model_server_result.job_id wWhbv_MIOUF9q8HoLRTCrQ _model_server_result.datetime_utc '2024-11-15 04:07:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wql # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":212}' # _entry.id 4WQL # _exptl.entry_id 4WQL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.25 _cell.angle_gamma 90 _cell.entry_id 4WQL _cell.length_a 45.46 _cell.length_b 42.01 _cell.length_c 47.81 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WQL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 45 A ASP 44 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A OD1 ASP 45 A ASP 44 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc3 A OD2 ASP 45 A ASP 44 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc4 A OD2 ASP 47 A ASP 46 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc5 A OD1 ASP 47 A ASP 46 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc6 A OD2 ASP 87 A ASP 86 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc7 B MG MG . A MG 201 1_555 O O HOH . A HOH 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc8 B MG MG . A MG 201 1_555 O O HOH . A HOH 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc9 B MG MG . A MG 201 1_555 O O HOH . A HOH 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc10 C MG MG . A MG 202 1_555 D O13 KAN . A KAN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4WQL _atom_sites.fract_transf_matrix[1][1] 0.021997 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005997 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 400 MG MG . C 2 MG A 1 202 401 MG MG . D 3 KAN A 1 203 500 KAN KAN . E 4 IPA A 1 204 1 IPA IPA . F 4 IPA A 1 205 2 IPA IPA . G 4 IPA A 1 206 3 IPA IPA . H 4 IPA A 1 207 4 IPA IPA . I 4 IPA A 1 208 5 IPA IPA . J 4 IPA A 1 209 6 IPA IPA . K 5 GOL A 1 210 7 GOL GOL . L 5 GOL A 1 211 8 GOL GOL . M 5 GOL A 1 212 9 GOL GOL . N 5 GOL A 1 213 10 GOL GOL . O 6 HOH A 1 301 185 HOH HOH . O 6 HOH A 2 302 174 HOH HOH . O 6 HOH A 3 303 176 HOH HOH . O 6 HOH A 4 304 227 HOH HOH . O 6 HOH A 5 305 159 HOH HOH . O 6 HOH A 6 306 77 HOH HOH . O 6 HOH A 7 307 52 HOH HOH . O 6 HOH A 8 308 152 HOH HOH . O 6 HOH A 9 309 126 HOH HOH . O 6 HOH A 10 310 84 HOH HOH . O 6 HOH A 11 311 213 HOH HOH . O 6 HOH A 12 312 90 HOH HOH . O 6 HOH A 13 313 211 HOH HOH . O 6 HOH A 14 314 269 HOH HOH . O 6 HOH A 15 315 222 HOH HOH . O 6 HOH A 16 316 92 HOH HOH . O 6 HOH A 17 317 249 HOH HOH . O 6 HOH A 18 318 199 HOH HOH . O 6 HOH A 19 319 31 HOH HOH . O 6 HOH A 20 320 49 HOH HOH . O 6 HOH A 21 321 45 HOH HOH . O 6 HOH A 22 322 338 HOH HOH . O 6 HOH A 23 323 201 HOH HOH . O 6 HOH A 24 324 171 HOH HOH . O 6 HOH A 25 325 25 HOH HOH . O 6 HOH A 26 326 1 HOH HOH . O 6 HOH A 27 327 70 HOH HOH . O 6 HOH A 28 328 219 HOH HOH . O 6 HOH A 29 329 40 HOH HOH . O 6 HOH A 30 330 8 HOH HOH . O 6 HOH A 31 331 15 HOH HOH . O 6 HOH A 32 332 63 HOH HOH . O 6 HOH A 33 333 242 HOH HOH . O 6 HOH A 34 334 246 HOH HOH . O 6 HOH A 35 335 220 HOH HOH . O 6 HOH A 36 336 279 HOH HOH . O 6 HOH A 37 337 205 HOH HOH . O 6 HOH A 38 338 252 HOH HOH . O 6 HOH A 39 339 46 HOH HOH . O 6 HOH A 40 340 240 HOH HOH . O 6 HOH A 41 341 108 HOH HOH . O 6 HOH A 42 342 20 HOH HOH . O 6 HOH A 43 343 326 HOH HOH . O 6 HOH A 44 344 123 HOH HOH . O 6 HOH A 45 345 23 HOH HOH . O 6 HOH A 46 346 256 HOH HOH . O 6 HOH A 47 347 101 HOH HOH . O 6 HOH A 48 348 115 HOH HOH . O 6 HOH A 49 349 14 HOH HOH . O 6 HOH A 50 350 57 HOH HOH . O 6 HOH A 51 351 19 HOH HOH . O 6 HOH A 52 352 334 HOH HOH . O 6 HOH A 53 353 59 HOH HOH . O 6 HOH A 54 354 44 HOH HOH . O 6 HOH A 55 355 260 HOH HOH . O 6 HOH A 56 356 128 HOH HOH . O 6 HOH A 57 357 268 HOH HOH . O 6 HOH A 58 358 12 HOH HOH . O 6 HOH A 59 359 188 HOH HOH . O 6 HOH A 60 360 100 HOH HOH . O 6 HOH A 61 361 286 HOH HOH . O 6 HOH A 62 362 29 HOH HOH . O 6 HOH A 63 363 248 HOH HOH . O 6 HOH A 64 364 300 HOH HOH . O 6 HOH A 65 365 221 HOH HOH . O 6 HOH A 66 366 298 HOH HOH . O 6 HOH A 67 367 324 HOH HOH . O 6 HOH A 68 368 225 HOH HOH . O 6 HOH A 69 369 30 HOH HOH . O 6 HOH A 70 370 258 HOH HOH . O 6 HOH A 71 371 47 HOH HOH . O 6 HOH A 72 372 210 HOH HOH . O 6 HOH A 73 373 236 HOH HOH . O 6 HOH A 74 374 253 HOH HOH . O 6 HOH A 75 375 53 HOH HOH . O 6 HOH A 76 376 307 HOH HOH . O 6 HOH A 77 377 117 HOH HOH . O 6 HOH A 78 378 212 HOH HOH . O 6 HOH A 79 379 316 HOH HOH . O 6 HOH A 80 380 262 HOH HOH . O 6 HOH A 81 381 226 HOH HOH . O 6 HOH A 82 382 333 HOH HOH . O 6 HOH A 83 383 289 HOH HOH . O 6 HOH A 84 384 73 HOH HOH . O 6 HOH A 85 385 317 HOH HOH . O 6 HOH A 86 386 60 HOH HOH . O 6 HOH A 87 387 147 HOH HOH . O 6 HOH A 88 388 200 HOH HOH . O 6 HOH A 89 389 9 HOH HOH . O 6 HOH A 90 390 257 HOH HOH . O 6 HOH A 91 391 339 HOH HOH . O 6 HOH A 92 392 304 HOH HOH . O 6 HOH A 93 393 177 HOH HOH . O 6 HOH A 94 394 54 HOH HOH . O 6 HOH A 95 395 233 HOH HOH . O 6 HOH A 96 396 61 HOH HOH . O 6 HOH A 97 397 335 HOH HOH . O 6 HOH A 98 398 255 HOH HOH . O 6 HOH A 99 399 143 HOH HOH . O 6 HOH A 100 400 229 HOH HOH . O 6 HOH A 101 401 313 HOH HOH . O 6 HOH A 102 402 75 HOH HOH . O 6 HOH A 103 403 36 HOH HOH . O 6 HOH A 104 404 323 HOH HOH . O 6 HOH A 105 405 267 HOH HOH . O 6 HOH A 106 406 312 HOH HOH . O 6 HOH A 107 407 109 HOH HOH . O 6 HOH A 108 408 266 HOH HOH . O 6 HOH A 109 409 303 HOH HOH . O 6 HOH A 110 410 318 HOH HOH . O 6 HOH A 111 411 315 HOH HOH . O 6 HOH A 112 412 319 HOH HOH . O 6 HOH A 113 413 2 HOH HOH . O 6 HOH A 114 414 3 HOH HOH . O 6 HOH A 115 415 4 HOH HOH . O 6 HOH A 116 416 5 HOH HOH . O 6 HOH A 117 417 6 HOH HOH . O 6 HOH A 118 418 7 HOH HOH . O 6 HOH A 119 419 10 HOH HOH . O 6 HOH A 120 420 11 HOH HOH . O 6 HOH A 121 421 13 HOH HOH . O 6 HOH A 122 422 16 HOH HOH . O 6 HOH A 123 423 17 HOH HOH . O 6 HOH A 124 424 21 HOH HOH . O 6 HOH A 125 425 22 HOH HOH . O 6 HOH A 126 426 24 HOH HOH . O 6 HOH A 127 427 26 HOH HOH . O 6 HOH A 128 428 27 HOH HOH . O 6 HOH A 129 429 28 HOH HOH . O 6 HOH A 130 430 33 HOH HOH . O 6 HOH A 131 431 34 HOH HOH . O 6 HOH A 132 432 35 HOH HOH . O 6 HOH A 133 433 37 HOH HOH . O 6 HOH A 134 434 38 HOH HOH . O 6 HOH A 135 435 41 HOH HOH . O 6 HOH A 136 436 42 HOH HOH . O 6 HOH A 137 437 43 HOH HOH . O 6 HOH A 138 438 48 HOH HOH . O 6 HOH A 139 439 50 HOH HOH . O 6 HOH A 140 440 51 HOH HOH . O 6 HOH A 141 441 55 HOH HOH . O 6 HOH A 142 442 56 HOH HOH . O 6 HOH A 143 443 58 HOH HOH . O 6 HOH A 144 444 62 HOH HOH . O 6 HOH A 145 445 64 HOH HOH . O 6 HOH A 146 446 65 HOH HOH . O 6 HOH A 147 447 66 HOH HOH . O 6 HOH A 148 448 67 HOH HOH . O 6 HOH A 149 449 68 HOH HOH . O 6 HOH A 150 450 69 HOH HOH . O 6 HOH A 151 451 71 HOH HOH . O 6 HOH A 152 452 74 HOH HOH . O 6 HOH A 153 453 78 HOH HOH . O 6 HOH A 154 454 81 HOH HOH . O 6 HOH A 155 455 82 HOH HOH . O 6 HOH A 156 456 83 HOH HOH . O 6 HOH A 157 457 86 HOH HOH . O 6 HOH A 158 458 87 HOH HOH . O 6 HOH A 159 459 88 HOH HOH . O 6 HOH A 160 460 89 HOH HOH . O 6 HOH A 161 461 91 HOH HOH . O 6 HOH A 162 462 93 HOH HOH . O 6 HOH A 163 463 96 HOH HOH . O 6 HOH A 164 464 97 HOH HOH . O 6 HOH A 165 465 98 HOH HOH . O 6 HOH A 166 466 102 HOH HOH . O 6 HOH A 167 467 103 HOH HOH . O 6 HOH A 168 468 106 HOH HOH . O 6 HOH A 169 469 110 HOH HOH . O 6 HOH A 170 470 111 HOH HOH . O 6 HOH A 171 471 119 HOH HOH . O 6 HOH A 172 472 121 HOH HOH . O 6 HOH A 173 473 122 HOH HOH . O 6 HOH A 174 474 124 HOH HOH . O 6 HOH A 175 475 125 HOH HOH . O 6 HOH A 176 476 133 HOH HOH . O 6 HOH A 177 477 137 HOH HOH . O 6 HOH A 178 478 140 HOH HOH . O 6 HOH A 179 479 141 HOH HOH . O 6 HOH A 180 480 146 HOH HOH . O 6 HOH A 181 481 150 HOH HOH . O 6 HOH A 182 482 153 HOH HOH . O 6 HOH A 183 483 155 HOH HOH . O 6 HOH A 184 484 168 HOH HOH . O 6 HOH A 185 485 170 HOH HOH . O 6 HOH A 186 486 173 HOH HOH . O 6 HOH A 187 487 175 HOH HOH . O 6 HOH A 188 488 183 HOH HOH . O 6 HOH A 189 489 189 HOH HOH . O 6 HOH A 190 490 190 HOH HOH . O 6 HOH A 191 491 196 HOH HOH . O 6 HOH A 192 492 197 HOH HOH . O 6 HOH A 193 493 202 HOH HOH . O 6 HOH A 194 494 203 HOH HOH . O 6 HOH A 195 495 204 HOH HOH . O 6 HOH A 196 496 206 HOH HOH . O 6 HOH A 197 497 209 HOH HOH . O 6 HOH A 198 498 216 HOH HOH . O 6 HOH A 199 499 217 HOH HOH . O 6 HOH A 200 500 218 HOH HOH . O 6 HOH A 201 501 223 HOH HOH . O 6 HOH A 202 502 224 HOH HOH . O 6 HOH A 203 503 230 HOH HOH . O 6 HOH A 204 504 231 HOH HOH . O 6 HOH A 205 505 232 HOH HOH . O 6 HOH A 206 506 235 HOH HOH . O 6 HOH A 207 507 237 HOH HOH . O 6 HOH A 208 508 243 HOH HOH . O 6 HOH A 209 509 244 HOH HOH . O 6 HOH A 210 510 247 HOH HOH . O 6 HOH A 211 511 251 HOH HOH . O 6 HOH A 212 512 259 HOH HOH . O 6 HOH A 213 513 261 HOH HOH . O 6 HOH A 214 514 271 HOH HOH . O 6 HOH A 215 515 272 HOH HOH . O 6 HOH A 216 516 276 HOH HOH . O 6 HOH A 217 517 277 HOH HOH . O 6 HOH A 218 518 281 HOH HOH . O 6 HOH A 219 519 282 HOH HOH . O 6 HOH A 220 520 283 HOH HOH . O 6 HOH A 221 521 291 HOH HOH . O 6 HOH A 222 522 293 HOH HOH . O 6 HOH A 223 523 294 HOH HOH . O 6 HOH A 224 524 295 HOH HOH . O 6 HOH A 225 525 296 HOH HOH . O 6 HOH A 226 526 299 HOH HOH . O 6 HOH A 227 527 306 HOH HOH . O 6 HOH A 228 528 309 HOH HOH . O 6 HOH A 229 529 320 HOH HOH . O 6 HOH A 230 530 321 HOH HOH . O 6 HOH A 231 531 322 HOH HOH . O 6 HOH A 232 532 325 HOH HOH . O 6 HOH A 233 533 329 HOH HOH . O 6 HOH A 234 534 330 HOH HOH . O 6 HOH A 235 535 331 HOH HOH . O 6 HOH A 236 536 332 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . M 5 -9.579 7.356 13.894 1 77.33 ? C1 GOL 212 A 1 HETATM 2 O O1 GOL . . . M 5 -10.3 8.002 14.926 1 76.67 ? O1 GOL 212 A 1 HETATM 3 C C2 GOL . . . M 5 -9.934 7.894 12.504 1 76.61 ? C2 GOL 212 A 1 HETATM 4 O O2 GOL . . . M 5 -8.842 8.566 11.897 1 67.06 ? O2 GOL 212 A 1 HETATM 5 C C3 GOL . . . M 5 -10.399 6.745 11.612 1 80.72 ? C3 GOL 212 A 1 HETATM 6 O O3 GOL . . . M 5 -10.022 6.994 10.275 1 83.37 ? O3 GOL 212 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 399 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #