data_4WRD # _model_server_result.job_id V3gG7A0klBLJgbRoBzzEEg _model_server_result.datetime_utc '2024-10-19 17:26:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wrd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4WRD # _exptl.entry_id 4WRD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.05 _cell.angle_gamma 90 _cell.entry_id 4WRD _cell.length_a 31.14 _cell.length_b 60.315 _cell.length_c 38.364 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 21 A ASP 21 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc2 A OD1 ASP 40 A ASP 40 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? metalc ? metalc4 A OE2 GLU 43 A GLU 43 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? metalc ? metalc5 B CA CA . A CA 201 1_555 C O5P THP . A THP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.173 ? metalc ? metalc6 B CA CA . A CA 201 1_555 D O HOH . A HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc7 B CA CA . A CA 201 1_555 D O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc8 B CA CA . A CA 201 1_555 D O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4WRD _atom_sites.fract_transf_matrix[1][1] 0.032113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002276 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 201 1 CA CA . C 3 THP A 1 202 1 THP THP . D 4 HOH A 1 301 29 HOH HOH . D 4 HOH A 2 302 24 HOH HOH . D 4 HOH A 3 303 35 HOH HOH . D 4 HOH A 4 304 49 HOH HOH . D 4 HOH A 5 305 128 HOH HOH . D 4 HOH A 6 306 5 HOH HOH . D 4 HOH A 7 307 127 HOH HOH . D 4 HOH A 8 308 22 HOH HOH . D 4 HOH A 9 309 15 HOH HOH . D 4 HOH A 10 310 58 HOH HOH . D 4 HOH A 11 311 132 HOH HOH . D 4 HOH A 12 312 62 HOH HOH . D 4 HOH A 13 313 71 HOH HOH . D 4 HOH A 14 314 28 HOH HOH . D 4 HOH A 15 315 121 HOH HOH . D 4 HOH A 16 316 47 HOH HOH . D 4 HOH A 17 317 131 HOH HOH . D 4 HOH A 18 318 50 HOH HOH . D 4 HOH A 19 319 30 HOH HOH . D 4 HOH A 20 320 26 HOH HOH . D 4 HOH A 21 321 129 HOH HOH . D 4 HOH A 22 322 97 HOH HOH . D 4 HOH A 23 323 13 HOH HOH . D 4 HOH A 24 324 6 HOH HOH . D 4 HOH A 25 325 18 HOH HOH . D 4 HOH A 26 326 130 HOH HOH . D 4 HOH A 27 327 41 HOH HOH . D 4 HOH A 28 328 126 HOH HOH . D 4 HOH A 29 329 107 HOH HOH . D 4 HOH A 30 330 98 HOH HOH . D 4 HOH A 31 331 67 HOH HOH . D 4 HOH A 32 332 115 HOH HOH . D 4 HOH A 33 333 119 HOH HOH . D 4 HOH A 34 334 113 HOH HOH . D 4 HOH A 35 335 117 HOH HOH . D 4 HOH A 36 336 114 HOH HOH . D 4 HOH A 37 337 118 HOH HOH . D 4 HOH A 38 338 116 HOH HOH . D 4 HOH A 39 339 1 HOH HOH . D 4 HOH A 40 340 2 HOH HOH . D 4 HOH A 41 341 3 HOH HOH . D 4 HOH A 42 342 4 HOH HOH . D 4 HOH A 43 343 8 HOH HOH . D 4 HOH A 44 344 9 HOH HOH . D 4 HOH A 45 345 10 HOH HOH . D 4 HOH A 46 346 11 HOH HOH . D 4 HOH A 47 347 12 HOH HOH . D 4 HOH A 48 348 14 HOH HOH . D 4 HOH A 49 349 16 HOH HOH . D 4 HOH A 50 350 17 HOH HOH . D 4 HOH A 51 351 19 HOH HOH . D 4 HOH A 52 352 20 HOH HOH . D 4 HOH A 53 353 21 HOH HOH . D 4 HOH A 54 354 23 HOH HOH . D 4 HOH A 55 355 25 HOH HOH . D 4 HOH A 56 356 27 HOH HOH . D 4 HOH A 57 357 31 HOH HOH . D 4 HOH A 58 358 32 HOH HOH . D 4 HOH A 59 359 33 HOH HOH . D 4 HOH A 60 360 34 HOH HOH . D 4 HOH A 61 361 37 HOH HOH . D 4 HOH A 62 362 39 HOH HOH . D 4 HOH A 63 363 40 HOH HOH . D 4 HOH A 64 364 44 HOH HOH . D 4 HOH A 65 365 48 HOH HOH . D 4 HOH A 66 366 51 HOH HOH . D 4 HOH A 67 367 52 HOH HOH . D 4 HOH A 68 368 53 HOH HOH . D 4 HOH A 69 369 55 HOH HOH . D 4 HOH A 70 370 59 HOH HOH . D 4 HOH A 71 371 64 HOH HOH . D 4 HOH A 72 372 70 HOH HOH . D 4 HOH A 73 373 90 HOH HOH . D 4 HOH A 74 374 91 HOH HOH . D 4 HOH A 75 375 92 HOH HOH . D 4 HOH A 76 376 93 HOH HOH . D 4 HOH A 77 377 94 HOH HOH . D 4 HOH A 78 378 95 HOH HOH . D 4 HOH A 79 379 96 HOH HOH . D 4 HOH A 80 380 99 HOH HOH . D 4 HOH A 81 381 100 HOH HOH . D 4 HOH A 82 382 101 HOH HOH . D 4 HOH A 83 383 102 HOH HOH . D 4 HOH A 84 384 103 HOH HOH . D 4 HOH A 85 385 104 HOH HOH . D 4 HOH A 86 386 105 HOH HOH . D 4 HOH A 87 387 106 HOH HOH . D 4 HOH A 88 388 108 HOH HOH . D 4 HOH A 89 389 109 HOH HOH . D 4 HOH A 90 390 110 HOH HOH . D 4 HOH A 91 391 111 HOH HOH . D 4 HOH A 92 392 123 HOH HOH . D 4 HOH A 93 393 124 HOH HOH . D 4 HOH A 94 394 125 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 44.254 _atom_site.Cartn_y 11.122 _atom_site.Cartn_z 46.548 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #