data_4WRH # _model_server_result.job_id wHpgOi76bwkd6qwAMcau1g _model_server_result.datetime_utc '2024-12-27 02:49:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wrh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4WRH # _exptl.entry_id 4WRH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.157 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-methyl-4H-1,2,4-triazole-3-thiol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WRH _cell.length_a 56.509 _cell.length_b 63.503 _cell.length_c 95.567 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WRH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N3 S' _chem_comp.formula_weight 115.157 _chem_comp.id YY1 _chem_comp.mon_nstd_flag . _chem_comp.name 5-methyl-4H-1,2,4-triazole-3-thiol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAG CAE YY1 sing 465 n n CAE NAD YY1 doub 466 n y CAE NAA YY1 sing 467 n y NAD NAC YY1 sing 468 n y NAC CAB YY1 doub 469 n y NAA CAB YY1 sing 470 n y CAB SAF YY1 sing 471 n n CAG H1 YY1 sing 472 n n CAG H2 YY1 sing 473 n n CAG H3 YY1 sing 474 n n NAA H4 YY1 sing 475 n n SAF H5 YY1 sing 476 n n # _atom_sites.entry_id 4WRH _atom_sites.fract_transf_matrix[1][1] 0.017696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 401 700 NAP NAP . C 3 YY2 A 1 402 1 YY2 YY2 . D 4 YY1 A 1 403 1 YY1 YY1 . E 5 EDO A 1 404 1 EDO EDO . F 5 EDO A 1 405 1 EDO EDO . G 6 HOH A 1 501 173 HOH HOH . G 6 HOH A 2 502 123 HOH HOH . G 6 HOH A 3 503 132 HOH HOH . G 6 HOH A 4 504 112 HOH HOH . G 6 HOH A 5 505 208 HOH HOH . G 6 HOH A 6 506 120 HOH HOH . G 6 HOH A 7 507 29 HOH HOH . G 6 HOH A 8 508 28 HOH HOH . G 6 HOH A 9 509 85 HOH HOH . G 6 HOH A 10 510 13 HOH HOH . G 6 HOH A 11 511 45 HOH HOH . G 6 HOH A 12 512 110 HOH HOH . G 6 HOH A 13 513 51 HOH HOH . G 6 HOH A 14 514 207 HOH HOH . G 6 HOH A 15 515 84 HOH HOH . G 6 HOH A 16 516 100 HOH HOH . G 6 HOH A 17 517 61 HOH HOH . G 6 HOH A 18 518 160 HOH HOH . G 6 HOH A 19 519 36 HOH HOH . G 6 HOH A 20 520 201 HOH HOH . G 6 HOH A 21 521 75 HOH HOH . G 6 HOH A 22 522 21 HOH HOH . G 6 HOH A 23 523 91 HOH HOH . G 6 HOH A 24 524 158 HOH HOH . G 6 HOH A 25 525 102 HOH HOH . G 6 HOH A 26 526 71 HOH HOH . G 6 HOH A 27 527 144 HOH HOH . G 6 HOH A 28 528 17 HOH HOH . G 6 HOH A 29 529 77 HOH HOH . G 6 HOH A 30 530 42 HOH HOH . G 6 HOH A 31 531 169 HOH HOH . G 6 HOH A 32 532 89 HOH HOH . G 6 HOH A 33 533 114 HOH HOH . G 6 HOH A 34 534 117 HOH HOH . G 6 HOH A 35 535 9 HOH HOH . G 6 HOH A 36 536 138 HOH HOH . G 6 HOH A 37 537 18 HOH HOH . G 6 HOH A 38 538 16 HOH HOH . G 6 HOH A 39 539 179 HOH HOH . G 6 HOH A 40 540 190 HOH HOH . G 6 HOH A 41 541 98 HOH HOH . G 6 HOH A 42 542 46 HOH HOH . G 6 HOH A 43 543 164 HOH HOH . G 6 HOH A 44 544 195 HOH HOH . G 6 HOH A 45 545 81 HOH HOH . G 6 HOH A 46 546 131 HOH HOH . G 6 HOH A 47 547 58 HOH HOH . G 6 HOH A 48 548 135 HOH HOH . G 6 HOH A 49 549 32 HOH HOH . G 6 HOH A 50 550 95 HOH HOH . G 6 HOH A 51 551 213 HOH HOH . G 6 HOH A 52 552 181 HOH HOH . G 6 HOH A 53 553 134 HOH HOH . G 6 HOH A 54 554 178 HOH HOH . G 6 HOH A 55 555 121 HOH HOH . G 6 HOH A 56 556 177 HOH HOH . G 6 HOH A 57 557 193 HOH HOH . G 6 HOH A 58 558 191 HOH HOH . G 6 HOH A 59 559 200 HOH HOH . G 6 HOH A 60 560 180 HOH HOH . G 6 HOH A 61 561 170 HOH HOH . G 6 HOH A 62 562 125 HOH HOH . G 6 HOH A 63 563 1 HOH HOH . G 6 HOH A 64 564 5 HOH HOH . G 6 HOH A 65 565 6 HOH HOH . G 6 HOH A 66 566 7 HOH HOH . G 6 HOH A 67 567 8 HOH HOH . G 6 HOH A 68 568 10 HOH HOH . G 6 HOH A 69 569 11 HOH HOH . G 6 HOH A 70 570 12 HOH HOH . G 6 HOH A 71 571 14 HOH HOH . G 6 HOH A 72 572 15 HOH HOH . G 6 HOH A 73 573 19 HOH HOH . G 6 HOH A 74 574 20 HOH HOH . G 6 HOH A 75 575 23 HOH HOH . G 6 HOH A 76 576 24 HOH HOH . G 6 HOH A 77 577 25 HOH HOH . G 6 HOH A 78 578 26 HOH HOH . G 6 HOH A 79 579 27 HOH HOH . G 6 HOH A 80 580 30 HOH HOH . G 6 HOH A 81 581 31 HOH HOH . G 6 HOH A 82 582 33 HOH HOH . G 6 HOH A 83 583 34 HOH HOH . G 6 HOH A 84 584 35 HOH HOH . G 6 HOH A 85 585 37 HOH HOH . G 6 HOH A 86 586 38 HOH HOH . G 6 HOH A 87 587 39 HOH HOH . G 6 HOH A 88 588 40 HOH HOH . G 6 HOH A 89 589 41 HOH HOH . G 6 HOH A 90 590 43 HOH HOH . G 6 HOH A 91 591 44 HOH HOH . G 6 HOH A 92 592 47 HOH HOH . G 6 HOH A 93 593 48 HOH HOH . G 6 HOH A 94 594 49 HOH HOH . G 6 HOH A 95 595 50 HOH HOH . G 6 HOH A 96 596 52 HOH HOH . G 6 HOH A 97 597 53 HOH HOH . G 6 HOH A 98 598 55 HOH HOH . G 6 HOH A 99 599 56 HOH HOH . G 6 HOH A 100 600 57 HOH HOH . G 6 HOH A 101 601 59 HOH HOH . G 6 HOH A 102 602 60 HOH HOH . G 6 HOH A 103 603 62 HOH HOH . G 6 HOH A 104 604 63 HOH HOH . G 6 HOH A 105 605 64 HOH HOH . G 6 HOH A 106 606 65 HOH HOH . G 6 HOH A 107 607 66 HOH HOH . G 6 HOH A 108 608 67 HOH HOH . G 6 HOH A 109 609 68 HOH HOH . G 6 HOH A 110 610 69 HOH HOH . G 6 HOH A 111 611 70 HOH HOH . G 6 HOH A 112 612 72 HOH HOH . G 6 HOH A 113 613 73 HOH HOH . G 6 HOH A 114 614 74 HOH HOH . G 6 HOH A 115 615 76 HOH HOH . G 6 HOH A 116 616 78 HOH HOH . G 6 HOH A 117 617 80 HOH HOH . G 6 HOH A 118 618 82 HOH HOH . G 6 HOH A 119 619 83 HOH HOH . G 6 HOH A 120 620 86 HOH HOH . G 6 HOH A 121 621 87 HOH HOH . G 6 HOH A 122 622 88 HOH HOH . G 6 HOH A 123 623 90 HOH HOH . G 6 HOH A 124 624 92 HOH HOH . G 6 HOH A 125 625 93 HOH HOH . G 6 HOH A 126 626 94 HOH HOH . G 6 HOH A 127 627 96 HOH HOH . G 6 HOH A 128 628 97 HOH HOH . G 6 HOH A 129 629 99 HOH HOH . G 6 HOH A 130 630 101 HOH HOH . G 6 HOH A 131 631 103 HOH HOH . G 6 HOH A 132 632 104 HOH HOH . G 6 HOH A 133 633 105 HOH HOH . G 6 HOH A 134 634 106 HOH HOH . G 6 HOH A 135 635 107 HOH HOH . G 6 HOH A 136 636 108 HOH HOH . G 6 HOH A 137 637 109 HOH HOH . G 6 HOH A 138 638 111 HOH HOH . G 6 HOH A 139 639 113 HOH HOH . G 6 HOH A 140 640 115 HOH HOH . G 6 HOH A 141 641 116 HOH HOH . G 6 HOH A 142 642 118 HOH HOH . G 6 HOH A 143 643 119 HOH HOH . G 6 HOH A 144 644 122 HOH HOH . G 6 HOH A 145 645 124 HOH HOH . G 6 HOH A 146 646 126 HOH HOH . G 6 HOH A 147 647 127 HOH HOH . G 6 HOH A 148 648 128 HOH HOH . G 6 HOH A 149 649 129 HOH HOH . G 6 HOH A 150 650 130 HOH HOH . G 6 HOH A 151 651 133 HOH HOH . G 6 HOH A 152 652 136 HOH HOH . G 6 HOH A 153 653 137 HOH HOH . G 6 HOH A 154 654 139 HOH HOH . G 6 HOH A 155 655 140 HOH HOH . G 6 HOH A 156 656 141 HOH HOH . G 6 HOH A 157 657 142 HOH HOH . G 6 HOH A 158 658 143 HOH HOH . G 6 HOH A 159 659 145 HOH HOH . G 6 HOH A 160 660 146 HOH HOH . G 6 HOH A 161 661 147 HOH HOH . G 6 HOH A 162 662 148 HOH HOH . G 6 HOH A 163 663 149 HOH HOH . G 6 HOH A 164 664 150 HOH HOH . G 6 HOH A 165 665 151 HOH HOH . G 6 HOH A 166 666 152 HOH HOH . G 6 HOH A 167 667 153 HOH HOH . G 6 HOH A 168 668 154 HOH HOH . G 6 HOH A 169 669 155 HOH HOH . G 6 HOH A 170 670 156 HOH HOH . G 6 HOH A 171 671 157 HOH HOH . G 6 HOH A 172 672 159 HOH HOH . G 6 HOH A 173 673 161 HOH HOH . G 6 HOH A 174 674 162 HOH HOH . G 6 HOH A 175 675 163 HOH HOH . G 6 HOH A 176 676 166 HOH HOH . G 6 HOH A 177 677 168 HOH HOH . G 6 HOH A 178 678 171 HOH HOH . G 6 HOH A 179 679 172 HOH HOH . G 6 HOH A 180 680 174 HOH HOH . G 6 HOH A 181 681 175 HOH HOH . G 6 HOH A 182 682 176 HOH HOH . G 6 HOH A 183 683 182 HOH HOH . G 6 HOH A 184 684 183 HOH HOH . G 6 HOH A 185 685 186 HOH HOH . G 6 HOH A 186 686 187 HOH HOH . G 6 HOH A 187 687 188 HOH HOH . G 6 HOH A 188 688 189 HOH HOH . G 6 HOH A 189 689 192 HOH HOH . G 6 HOH A 190 690 194 HOH HOH . G 6 HOH A 191 691 196 HOH HOH . G 6 HOH A 192 692 197 HOH HOH . G 6 HOH A 193 693 198 HOH HOH . G 6 HOH A 194 694 199 HOH HOH . G 6 HOH A 195 695 202 HOH HOH . G 6 HOH A 196 696 203 HOH HOH . G 6 HOH A 197 697 204 HOH HOH . G 6 HOH A 198 698 205 HOH HOH . G 6 HOH A 199 699 206 HOH HOH . G 6 HOH A 200 700 209 HOH HOH . G 6 HOH A 201 701 210 HOH HOH . G 6 HOH A 202 702 211 HOH HOH . G 6 HOH A 203 703 212 HOH HOH . G 6 HOH A 204 704 215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAG YY1 . . . D 4 -1.899 -3.787 -14.866 0.6 17.55 ? CAG YY1 403 A 1 HETATM 2 C CAE YY1 . . . D 4 -1.128 -3.034 -13.79 0.6 17.35 ? CAE YY1 403 A 1 HETATM 3 N NAA YY1 . . . D 4 -1.612 -2.481 -12.696 0.6 17.45 ? NAA YY1 403 A 1 HETATM 4 N NAD YY1 . . . D 4 0.185 -2.802 -13.785 0.6 15.59 ? NAD YY1 403 A 1 HETATM 5 N NAC YY1 . . . D 4 0.488 -2.228 -12.872 0.6 17.77 ? NAC YY1 403 A 1 HETATM 6 C CAB YY1 . . . D 4 -0.564 -1.96 -12.097 0.6 18.5 ? CAB YY1 403 A 1 HETATM 7 S SAF YY1 . . . D 4 -0.544 -1.086 -10.593 0.6 21.99 ? SAF YY1 403 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #