data_4WTH # _model_server_result.job_id B2KTgam38Ryitzj75Hx3xQ _model_server_result.datetime_utc '2024-10-12 15:23:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 4WTH # _exptl.entry_id 4WTH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 89.99 _cell.angle_gamma 87.5 _cell.entry_id 4WTH _cell.length_a 49.096 _cell.length_b 59.786 _cell.length_c 77.79 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K 1 1 B,D,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC C 1 MAL 2 n C GLC 2 C 2 GLC C 1 MAL 2 n D GLC 1 D 1 GLC D 1 MAL 2 n D GLC 2 D 2 GLC D 1 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 sing covale ? covale2 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing metalc ? metalc1 A NE2 HIS 39 A HIS 39 1_555 F ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc2 A NE2 HIS 203 A HIS 203 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc3 A OE1 GLU 278 A GLU 278 1_555 E ZN ZN . A ZN 501 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc4 A OE2 GLU 278 A GLU 278 1_555 E ZN ZN . A ZN 501 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc5 A OE1 GLU 383 A GLU 383 1_555 J ZN ZN . B ZN 503 1_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc6 E ZN ZN . A ZN 501 1_555 K O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc7 E ZN ZN . A ZN 501 1_555 K O HOH . A HOH 667 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc8 F ZN ZN . A ZN 502 1_655 B OE1 GLU 383 B GLU 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc9 F ZN ZN . A ZN 502 1_555 L O HOH . B HOH 670 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc10 B NE2 HIS 39 B HIS 39 1_555 J ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc11 B NE2 HIS 203 B HIS 203 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc12 B OE2 GLU 278 B GLU 278 1_555 H ZN ZN . B ZN 501 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc13 B OD2 ASP 287 B ASP 287 1_555 I ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc14 B OE2 GLU 310 B GLU 310 1_555 I ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc15 H ZN ZN . B ZN 501 1_555 L O HOH . B HOH 661 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc16 H ZN ZN . B ZN 501 1_555 L O HOH . B HOH 663 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc17 J ZN ZN . B ZN 503 1_555 L O HOH . B HOH 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4WTH _atom_sites.fract_transf_matrix[1][1] 0.020368 _atom_sites.fract_transf_matrix[1][2] -0.000888 _atom_sites.fract_transf_matrix[1][3] -0.000003 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016742 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 501 2 ZN ZN . F 3 ZN A 1 502 7 ZN ZN . G 3 ZN A 1 503 8 ZN ZN . H 3 ZN B 1 501 1 ZN ZN . I 3 ZN B 1 502 5 ZN ZN . J 3 ZN B 1 503 6 ZN ZN . K 4 HOH A 1 601 133 HOH HOH . K 4 HOH A 2 602 19 HOH HOH . K 4 HOH A 3 603 8 HOH HOH . K 4 HOH A 4 604 27 HOH HOH . K 4 HOH A 5 605 70 HOH HOH . K 4 HOH A 6 606 61 HOH HOH . K 4 HOH A 7 607 149 HOH HOH . K 4 HOH A 8 608 47 HOH HOH . K 4 HOH A 9 609 68 HOH HOH . K 4 HOH A 10 610 134 HOH HOH . K 4 HOH A 11 611 91 HOH HOH . K 4 HOH A 12 612 28 HOH HOH . K 4 HOH A 13 613 33 HOH HOH . K 4 HOH A 14 614 34 HOH HOH . K 4 HOH A 15 615 8 HOH HOH . K 4 HOH A 16 616 142 HOH HOH . K 4 HOH A 17 617 80 HOH HOH . K 4 HOH A 18 618 76 HOH HOH . K 4 HOH A 19 619 24 HOH HOH . K 4 HOH A 20 620 131 HOH HOH . K 4 HOH A 21 621 62 HOH HOH . K 4 HOH A 22 622 107 HOH HOH . K 4 HOH A 23 623 38 HOH HOH . K 4 HOH A 24 624 88 HOH HOH . K 4 HOH A 25 625 140 HOH HOH . K 4 HOH A 26 626 124 HOH HOH . K 4 HOH A 27 627 23 HOH HOH . K 4 HOH A 28 628 72 HOH HOH . K 4 HOH A 29 629 92 HOH HOH . K 4 HOH A 30 630 59 HOH HOH . K 4 HOH A 31 631 2 HOH HOH . K 4 HOH A 32 632 12 HOH HOH . K 4 HOH A 33 633 1 HOH HOH . K 4 HOH A 34 634 105 HOH HOH . K 4 HOH A 35 635 2 HOH HOH . K 4 HOH A 36 636 41 HOH HOH . K 4 HOH A 37 637 32 HOH HOH . K 4 HOH A 38 638 130 HOH HOH . K 4 HOH A 39 639 60 HOH HOH . K 4 HOH A 40 640 67 HOH HOH . K 4 HOH A 41 641 21 HOH HOH . K 4 HOH A 42 642 3 HOH HOH . K 4 HOH A 43 643 101 HOH HOH . K 4 HOH A 44 644 85 HOH HOH . K 4 HOH A 45 645 1 HOH HOH . K 4 HOH A 46 646 58 HOH HOH . K 4 HOH A 47 647 141 HOH HOH . K 4 HOH A 48 648 65 HOH HOH . K 4 HOH A 49 649 5 HOH HOH . K 4 HOH A 50 650 94 HOH HOH . K 4 HOH A 51 651 4 HOH HOH . K 4 HOH A 52 652 119 HOH HOH . K 4 HOH A 53 653 63 HOH HOH . K 4 HOH A 54 654 146 HOH HOH . K 4 HOH A 55 655 115 HOH HOH . K 4 HOH A 56 656 109 HOH HOH . K 4 HOH A 57 657 127 HOH HOH . K 4 HOH A 58 658 48 HOH HOH . K 4 HOH A 59 659 113 HOH HOH . K 4 HOH A 60 660 126 HOH HOH . K 4 HOH A 61 661 74 HOH HOH . K 4 HOH A 62 662 125 HOH HOH . K 4 HOH A 63 663 9 HOH HOH . K 4 HOH A 64 664 36 HOH HOH . K 4 HOH A 65 665 90 HOH HOH . K 4 HOH A 66 666 82 HOH HOH . K 4 HOH A 67 667 17 HOH HOH . K 4 HOH A 68 668 103 HOH HOH . K 4 HOH A 69 669 106 HOH HOH . K 4 HOH A 70 670 42 HOH HOH . K 4 HOH A 71 671 84 HOH HOH . K 4 HOH A 72 672 4 HOH HOH . K 4 HOH A 73 673 77 HOH HOH . L 4 HOH B 1 601 148 HOH HOH . L 4 HOH B 2 602 3 HOH HOH . L 4 HOH B 3 603 22 HOH HOH . L 4 HOH B 4 604 120 HOH HOH . L 4 HOH B 5 605 40 HOH HOH . L 4 HOH B 6 606 93 HOH HOH . L 4 HOH B 7 607 20 HOH HOH . L 4 HOH B 8 608 64 HOH HOH . L 4 HOH B 9 609 29 HOH HOH . L 4 HOH B 10 610 30 HOH HOH . L 4 HOH B 11 611 1 HOH HOH . L 4 HOH B 12 612 10 HOH HOH . L 4 HOH B 13 613 132 HOH HOH . L 4 HOH B 14 614 50 HOH HOH . L 4 HOH B 15 615 43 HOH HOH . L 4 HOH B 16 616 55 HOH HOH . L 4 HOH B 17 617 73 HOH HOH . L 4 HOH B 18 618 37 HOH HOH . L 4 HOH B 19 619 3 HOH HOH . L 4 HOH B 20 620 75 HOH HOH . L 4 HOH B 21 621 135 HOH HOH . L 4 HOH B 22 622 129 HOH HOH . L 4 HOH B 23 623 122 HOH HOH . L 4 HOH B 24 624 102 HOH HOH . L 4 HOH B 25 625 1 HOH HOH . L 4 HOH B 26 626 123 HOH HOH . L 4 HOH B 27 627 5 HOH HOH . L 4 HOH B 28 628 147 HOH HOH . L 4 HOH B 29 629 139 HOH HOH . L 4 HOH B 30 630 4 HOH HOH . L 4 HOH B 31 631 44 HOH HOH . L 4 HOH B 32 632 11 HOH HOH . L 4 HOH B 33 633 6 HOH HOH . L 4 HOH B 34 634 87 HOH HOH . L 4 HOH B 35 635 6 HOH HOH . L 4 HOH B 36 636 51 HOH HOH . L 4 HOH B 37 637 99 HOH HOH . L 4 HOH B 38 638 31 HOH HOH . L 4 HOH B 39 639 4 HOH HOH . L 4 HOH B 40 640 78 HOH HOH . L 4 HOH B 41 641 79 HOH HOH . L 4 HOH B 42 642 136 HOH HOH . L 4 HOH B 43 643 143 HOH HOH . L 4 HOH B 44 644 137 HOH HOH . L 4 HOH B 45 645 138 HOH HOH . L 4 HOH B 46 646 69 HOH HOH . L 4 HOH B 47 647 57 HOH HOH . L 4 HOH B 48 648 110 HOH HOH . L 4 HOH B 49 649 128 HOH HOH . L 4 HOH B 50 650 104 HOH HOH . L 4 HOH B 51 651 112 HOH HOH . L 4 HOH B 52 652 98 HOH HOH . L 4 HOH B 53 653 45 HOH HOH . L 4 HOH B 54 654 7 HOH HOH . L 4 HOH B 55 655 3 HOH HOH . L 4 HOH B 56 656 71 HOH HOH . L 4 HOH B 57 657 66 HOH HOH . L 4 HOH B 58 658 53 HOH HOH . L 4 HOH B 59 659 89 HOH HOH . L 4 HOH B 60 660 7 HOH HOH . L 4 HOH B 61 661 26 HOH HOH . L 4 HOH B 62 662 96 HOH HOH . L 4 HOH B 63 663 15 HOH HOH . L 4 HOH B 64 664 5 HOH HOH . L 4 HOH B 65 665 2 HOH HOH . L 4 HOH B 66 666 25 HOH HOH . L 4 HOH B 67 667 118 HOH HOH . L 4 HOH B 68 668 54 HOH HOH . L 4 HOH B 69 669 95 HOH HOH . L 4 HOH B 70 670 150 HOH HOH . L 4 HOH B 71 671 114 HOH HOH . L 4 HOH B 72 672 86 HOH HOH . L 4 HOH B 73 673 1 HOH HOH . L 4 HOH B 74 674 116 HOH HOH . L 4 HOH B 75 675 111 HOH HOH . L 4 HOH B 76 676 46 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.449 _atom_site.Cartn_y 21.389 _atom_site.Cartn_z 48.268 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #