data_4WUO # _model_server_result.job_id NgETqV4e4TOEiurkRhDuyw _model_server_result.datetime_utc '2024-11-14 04:54:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wuo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":415}' # _entry.id 4WUO # _exptl.entry_id 4WUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 176.167 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-ISOPROPYLMALIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WUO _cell.length_a 50.18 _cell.length_b 143.25 _cell.length_c 174.89 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 68 A GLU 65 1_555 F K K . A K 404 1_555 ? B ? ? ? ? ? ? ? ? ? ? 3.036 ? metalc ? metalc2 A OE2 GLU 68 A GLU 65 1_555 F K K . A K 404 1_555 ? B ? ? ? ? ? ? ? ? ? ? 3.287 ? metalc ? metalc3 A OD2 ASP 220 A ASP 217 1_555 G MN MN . A MN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc4 A OD1 ASP 244 A ASP 241 1_555 E MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc5 C O1 IPM . A IPM 401 1_555 E MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc6 C O2 IPM . A IPM 401 1_555 E MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc7 E MN MN . A MN 403 1_555 U O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc8 E MN MN . A MN 403 1_555 U O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc9 E MN MN . A MN 403 1_555 B OD2 ASP 220 B ASP 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc10 F K K . A K 404 1_555 L O1 GOL . A GOL 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? metalc ? metalc11 F K K . A K 404 1_555 P O2 GOL . A GOL 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc12 F K K . A K 404 1_555 P O1 GOL . A GOL 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? metalc ? metalc13 F K K . A K 404 1_555 U O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc14 F K K . A K 404 1_555 V O HOH . B HOH 501 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc15 G MN MN . A MN 405 1_555 Q O2 IPM . A IPM 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? metalc ? metalc16 G MN MN . A MN 405 1_555 Q O1 IPM . A IPM 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc17 G MN MN . A MN 405 1_555 B OD1 ASP 244 B ASP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc18 G MN MN . A MN 405 1_555 V O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc19 G MN MN . A MN 405 1_555 V O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'C7 H12 O5' _chem_comp.formula_weight 176.167 _chem_comp.id IPM _chem_comp.mon_nstd_flag . _chem_comp.name '3-ISOPROPYLMALIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPM sing 181 n n C1 O2 IPM sing 182 n n C1 O3 IPM doub 183 n n C2 C3 IPM sing 184 n n C2 O1 IPM sing 185 n n C2 H2 IPM sing 186 n n C3 C4 IPM sing 187 n n C3 C5 IPM sing 188 n n C3 H3 IPM sing 189 n n C4 O4 IPM doub 190 n n C4 O5 IPM sing 191 n n C5 C6 IPM sing 192 n n C5 C7 IPM sing 193 n n C5 H5 IPM sing 194 n n C6 H61 IPM sing 195 n n C6 H62 IPM sing 196 n n C6 H63 IPM sing 197 n n C7 H71 IPM sing 198 n n C7 H72 IPM sing 199 n n C7 H73 IPM sing 200 n n O1 HO1 IPM sing 201 n n O2 HO2 IPM sing 202 n n O5 HO5 IPM sing 203 n n # _atom_sites.entry_id 4WUO _atom_sites.fract_transf_matrix[1][1] 0.019928 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IPM A 1 401 800 IPM IPM . D 3 NAD A 1 402 900 NAD NAD . E 4 MN A 1 403 999 MN MN . F 5 K A 1 404 1005 K K . G 4 MN A 1 405 999 MN MN . H 6 EOH A 1 406 2 EOH EOH . I 6 EOH A 1 407 3 EOH EOH . J 7 GOL A 1 408 4 GOL GOL . K 7 GOL A 1 409 6 GOL GOL . L 7 GOL A 1 410 7 GOL GOL . M 6 EOH A 1 411 8 EOH EOH . N 6 EOH A 1 412 10 EOH EOH . O 6 EOH A 1 413 11 EOH EOH . P 7 GOL A 1 414 12 GOL GOL . Q 2 IPM A 1 415 800 IPM IPM . R 3 NAD B 1 401 900 NAD NAD . S 6 EOH B 1 402 1 EOH EOH . T 6 EOH B 1 403 9 EOH EOH . U 8 HOH A 1 501 126 HOH HOH . U 8 HOH A 2 502 168 HOH HOH . U 8 HOH A 3 503 71 HOH HOH . U 8 HOH A 4 504 52 HOH HOH . U 8 HOH A 5 505 162 HOH HOH . U 8 HOH A 6 506 166 HOH HOH . U 8 HOH A 7 507 47 HOH HOH . U 8 HOH A 8 508 132 HOH HOH . U 8 HOH A 9 509 91 HOH HOH . U 8 HOH A 10 510 89 HOH HOH . U 8 HOH A 11 511 119 HOH HOH . U 8 HOH A 12 512 142 HOH HOH . U 8 HOH A 13 513 73 HOH HOH . U 8 HOH A 14 514 88 HOH HOH . U 8 HOH A 15 515 172 HOH HOH . U 8 HOH A 16 516 118 HOH HOH . U 8 HOH A 17 517 174 HOH HOH . U 8 HOH A 18 518 149 HOH HOH . U 8 HOH A 19 519 87 HOH HOH . U 8 HOH A 20 520 124 HOH HOH . U 8 HOH A 21 521 78 HOH HOH . U 8 HOH A 22 522 133 HOH HOH . U 8 HOH A 23 523 177 HOH HOH . U 8 HOH A 24 524 154 HOH HOH . U 8 HOH A 25 525 170 HOH HOH . U 8 HOH A 26 526 136 HOH HOH . U 8 HOH A 27 527 1 HOH HOH . U 8 HOH A 28 528 2 HOH HOH . U 8 HOH A 29 529 3 HOH HOH . U 8 HOH A 30 530 8 HOH HOH . U 8 HOH A 31 531 9 HOH HOH . U 8 HOH A 32 532 11 HOH HOH . U 8 HOH A 33 533 14 HOH HOH . U 8 HOH A 34 534 16 HOH HOH . U 8 HOH A 35 535 18 HOH HOH . U 8 HOH A 36 536 19 HOH HOH . U 8 HOH A 37 537 20 HOH HOH . U 8 HOH A 38 538 21 HOH HOH . U 8 HOH A 39 539 22 HOH HOH . U 8 HOH A 40 540 29 HOH HOH . U 8 HOH A 41 541 30 HOH HOH . U 8 HOH A 42 542 35 HOH HOH . U 8 HOH A 43 543 36 HOH HOH . U 8 HOH A 44 544 38 HOH HOH . U 8 HOH A 45 545 40 HOH HOH . U 8 HOH A 46 546 41 HOH HOH . U 8 HOH A 47 547 42 HOH HOH . U 8 HOH A 48 548 43 HOH HOH . U 8 HOH A 49 549 44 HOH HOH . U 8 HOH A 50 550 46 HOH HOH . U 8 HOH A 51 551 49 HOH HOH . U 8 HOH A 52 552 50 HOH HOH . U 8 HOH A 53 553 51 HOH HOH . U 8 HOH A 54 554 53 HOH HOH . U 8 HOH A 55 555 54 HOH HOH . U 8 HOH A 56 556 55 HOH HOH . U 8 HOH A 57 557 56 HOH HOH . U 8 HOH A 58 558 57 HOH HOH . U 8 HOH A 59 559 58 HOH HOH . U 8 HOH A 60 560 60 HOH HOH . U 8 HOH A 61 561 62 HOH HOH . U 8 HOH A 62 562 63 HOH HOH . U 8 HOH A 63 563 67 HOH HOH . U 8 HOH A 64 564 68 HOH HOH . U 8 HOH A 65 565 75 HOH HOH . U 8 HOH A 66 566 81 HOH HOH . U 8 HOH A 67 567 82 HOH HOH . U 8 HOH A 68 568 84 HOH HOH . U 8 HOH A 69 569 92 HOH HOH . U 8 HOH A 70 570 94 HOH HOH . U 8 HOH A 71 571 95 HOH HOH . U 8 HOH A 72 572 98 HOH HOH . U 8 HOH A 73 573 99 HOH HOH . U 8 HOH A 74 574 101 HOH HOH . U 8 HOH A 75 575 104 HOH HOH . U 8 HOH A 76 576 105 HOH HOH . U 8 HOH A 77 577 106 HOH HOH . U 8 HOH A 78 578 109 HOH HOH . U 8 HOH A 79 579 110 HOH HOH . U 8 HOH A 80 580 111 HOH HOH . U 8 HOH A 81 581 112 HOH HOH . U 8 HOH A 82 582 115 HOH HOH . U 8 HOH A 83 583 116 HOH HOH . U 8 HOH A 84 584 117 HOH HOH . U 8 HOH A 85 585 120 HOH HOH . U 8 HOH A 86 586 122 HOH HOH . U 8 HOH A 87 587 123 HOH HOH . U 8 HOH A 88 588 125 HOH HOH . U 8 HOH A 89 589 128 HOH HOH . U 8 HOH A 90 590 130 HOH HOH . U 8 HOH A 91 591 134 HOH HOH . U 8 HOH A 92 592 135 HOH HOH . U 8 HOH A 93 593 139 HOH HOH . U 8 HOH A 94 594 141 HOH HOH . U 8 HOH A 95 595 143 HOH HOH . U 8 HOH A 96 596 146 HOH HOH . U 8 HOH A 97 597 150 HOH HOH . U 8 HOH A 98 598 151 HOH HOH . U 8 HOH A 99 599 155 HOH HOH . U 8 HOH A 100 600 156 HOH HOH . U 8 HOH A 101 601 157 HOH HOH . U 8 HOH A 102 602 160 HOH HOH . U 8 HOH A 103 603 161 HOH HOH . U 8 HOH A 104 604 164 HOH HOH . U 8 HOH A 105 605 167 HOH HOH . U 8 HOH A 106 606 171 HOH HOH . U 8 HOH A 107 607 175 HOH HOH . U 8 HOH A 108 608 176 HOH HOH . U 8 HOH A 109 609 45 HOH HOH . V 8 HOH B 1 501 173 HOH HOH . V 8 HOH B 2 502 64 HOH HOH . V 8 HOH B 3 503 178 HOH HOH . V 8 HOH B 4 504 107 HOH HOH . V 8 HOH B 5 505 4 HOH HOH . V 8 HOH B 6 506 5 HOH HOH . V 8 HOH B 7 507 6 HOH HOH . V 8 HOH B 8 508 7 HOH HOH . V 8 HOH B 9 509 10 HOH HOH . V 8 HOH B 10 510 12 HOH HOH . V 8 HOH B 11 511 13 HOH HOH . V 8 HOH B 12 512 15 HOH HOH . V 8 HOH B 13 513 17 HOH HOH . V 8 HOH B 14 514 23 HOH HOH . V 8 HOH B 15 515 24 HOH HOH . V 8 HOH B 16 516 25 HOH HOH . V 8 HOH B 17 517 26 HOH HOH . V 8 HOH B 18 518 27 HOH HOH . V 8 HOH B 19 519 28 HOH HOH . V 8 HOH B 20 520 31 HOH HOH . V 8 HOH B 21 521 32 HOH HOH . V 8 HOH B 22 522 33 HOH HOH . V 8 HOH B 23 523 34 HOH HOH . V 8 HOH B 24 524 37 HOH HOH . V 8 HOH B 25 525 39 HOH HOH . V 8 HOH B 26 526 48 HOH HOH . V 8 HOH B 27 527 59 HOH HOH . V 8 HOH B 28 528 61 HOH HOH . V 8 HOH B 29 529 65 HOH HOH . V 8 HOH B 30 530 66 HOH HOH . V 8 HOH B 31 531 69 HOH HOH . V 8 HOH B 32 532 70 HOH HOH . V 8 HOH B 33 533 72 HOH HOH . V 8 HOH B 34 534 74 HOH HOH . V 8 HOH B 35 535 76 HOH HOH . V 8 HOH B 36 536 77 HOH HOH . V 8 HOH B 37 537 79 HOH HOH . V 8 HOH B 38 538 80 HOH HOH . V 8 HOH B 39 539 83 HOH HOH . V 8 HOH B 40 540 85 HOH HOH . V 8 HOH B 41 541 86 HOH HOH . V 8 HOH B 42 542 90 HOH HOH . V 8 HOH B 43 543 93 HOH HOH . V 8 HOH B 44 544 96 HOH HOH . V 8 HOH B 45 545 97 HOH HOH . V 8 HOH B 46 546 100 HOH HOH . V 8 HOH B 47 547 102 HOH HOH . V 8 HOH B 48 548 103 HOH HOH . V 8 HOH B 49 549 108 HOH HOH . V 8 HOH B 50 550 113 HOH HOH . V 8 HOH B 51 551 114 HOH HOH . V 8 HOH B 52 552 121 HOH HOH . V 8 HOH B 53 553 127 HOH HOH . V 8 HOH B 54 554 129 HOH HOH . V 8 HOH B 55 555 131 HOH HOH . V 8 HOH B 56 556 137 HOH HOH . V 8 HOH B 57 557 138 HOH HOH . V 8 HOH B 58 558 140 HOH HOH . V 8 HOH B 59 559 144 HOH HOH . V 8 HOH B 60 560 145 HOH HOH . V 8 HOH B 61 561 147 HOH HOH . V 8 HOH B 62 562 148 HOH HOH . V 8 HOH B 63 563 152 HOH HOH . V 8 HOH B 64 564 153 HOH HOH . V 8 HOH B 65 565 158 HOH HOH . V 8 HOH B 66 566 159 HOH HOH . V 8 HOH B 67 567 163 HOH HOH . V 8 HOH B 68 568 165 HOH HOH . V 8 HOH B 69 569 169 HOH HOH . V 8 HOH B 70 570 179 HOH HOH . V 8 HOH B 71 571 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPM . . . Q 2 -0.392 -59.245 18.4 1 36.82 ? C1 IPM 415 A 1 HETATM 2 C C2 IPM . . . Q 2 1.056 -58.824 18.504 1 29.03 ? C2 IPM 415 A 1 HETATM 3 C C3 IPM . . . Q 2 1.734 -58.799 17.137 1 28.03 ? C3 IPM 415 A 1 HETATM 4 C C4 IPM . . . Q 2 0.999 -57.803 16.217 1 31.6 ? C4 IPM 415 A 1 HETATM 5 C C5 IPM . . . Q 2 3.247 -58.475 17.206 1 25.86 ? C5 IPM 415 A 1 HETATM 6 C C6 IPM . . . Q 2 3.917 -58.656 15.806 1 26.31 ? C6 IPM 415 A 1 HETATM 7 C C7 IPM . . . Q 2 3.976 -59.296 18.252 1 24.34 ? C7 IPM 415 A 1 HETATM 8 O O1 IPM . . . Q 2 1.104 -57.514 19.044 1 28.57 ? O1 IPM 415 A 1 HETATM 9 O O2 IPM . . . Q 2 -1.301 -58.388 18.887 1 29.97 ? O2 IPM 415 A 1 HETATM 10 O O3 IPM . . . Q 2 -0.63 -60.336 17.906 1 42.84 ? O3 IPM 415 A 1 HETATM 11 O O4 IPM . . . Q 2 0.268 -58.274 15.394 1 34.16 ? O4 IPM 415 A 1 HETATM 12 O O5 IPM . . . Q 2 1.193 -56.469 16.397 1 31.83 ? O5 IPM 415 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #