data_4WUW # _model_server_result.job_id xjBl1ojYqYxdDOBEt64HJg _model_server_result.datetime_utc '2024-11-19 17:36:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wuw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4WUW # _exptl.entry_id 4WUW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4WUW _cell.length_a 97.699 _cell.length_b 97.699 _cell.length_c 45.027 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WUW _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 97.699 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 48.8495 84.609816 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 135 1_555 A SG CYS 146 A CYS 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 124 A CYS 204 1_555 A SG CYS 138 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 A C SER 30 A SER 110 1_555 A N MHO 31 A MHO 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MHO 31 A MHO 111 1_555 A N LEU 32 A LEU 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C GLU 53 A GLU 133 1_555 A N MHO 54 A MHO 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MHO 54 A MHO 134 1_555 A N CYS 55 A CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD2 ASP 91 A ASP 171 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.08 ? metalc ? metalc2 A OE1 GLU 95 A GLU 175 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc3 A OE1 GLU 115 A GLU 195 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc4 A O ARG 117 A ARG 197 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc5 A O GLU 122 A GLU 202 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc6 A OD1 ASN 134 A ASN 214 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc7 A O ASP 135 A ASP 215 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc8 A OD1 ASP 135 A ASP 215 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc9 B O1 INS . A INS 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc10 B O6 INS . A INS 501 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id INS _chem_comp.mon_nstd_flag . _chem_comp.name 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms MYO-INOSITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 INS sing 173 n n C1 C6 INS sing 174 n n C1 O1 INS sing 175 n n C1 H1 INS sing 176 n n C2 C3 INS sing 177 n n C2 O2 INS sing 178 n n C2 H2 INS sing 179 n n C3 C4 INS sing 180 n n C3 O3 INS sing 181 n n C3 H3 INS sing 182 n n C4 C5 INS sing 183 n n C4 O4 INS sing 184 n n C4 H4 INS sing 185 n n C5 C6 INS sing 186 n n C5 O5 INS sing 187 n n C5 H5 INS sing 188 n n C6 O6 INS sing 189 n n C6 H6 INS sing 190 n n O1 HO1 INS sing 191 n n O2 HO2 INS sing 192 n n O3 HO3 INS sing 193 n n O4 HO4 INS sing 194 n n O5 HO5 INS sing 195 n n O6 HO6 INS sing 196 n n # _atom_sites.entry_id 4WUW _atom_sites.fract_transf_matrix[1][1] 0.010236 _atom_sites.fract_transf_matrix[1][2] 0.005909 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 INS A 1 501 501 INS INS . C 3 CA A 1 502 300 CA CA . D 3 CA A 1 503 1 CA CA . E 4 HOH A 1 601 49 HOH HOH . E 4 HOH A 2 602 12 HOH HOH . E 4 HOH A 3 603 38 HOH HOH . E 4 HOH A 4 604 48 HOH HOH . E 4 HOH A 5 605 28 HOH HOH . E 4 HOH A 6 606 19 HOH HOH . E 4 HOH A 7 607 36 HOH HOH . E 4 HOH A 8 608 41 HOH HOH . E 4 HOH A 9 609 4 HOH HOH . E 4 HOH A 10 610 11 HOH HOH . E 4 HOH A 11 611 14 HOH HOH . E 4 HOH A 12 612 18 HOH HOH . E 4 HOH A 13 613 3 HOH HOH . E 4 HOH A 14 614 25 HOH HOH . E 4 HOH A 15 615 42 HOH HOH . E 4 HOH A 16 616 20 HOH HOH . E 4 HOH A 17 617 10 HOH HOH . E 4 HOH A 18 618 33 HOH HOH . E 4 HOH A 19 619 40 HOH HOH . E 4 HOH A 20 620 27 HOH HOH . E 4 HOH A 21 621 17 HOH HOH . E 4 HOH A 22 622 45 HOH HOH . E 4 HOH A 23 623 37 HOH HOH . E 4 HOH A 24 624 1 HOH HOH . E 4 HOH A 25 625 2 HOH HOH . E 4 HOH A 26 626 5 HOH HOH . E 4 HOH A 27 627 6 HOH HOH . E 4 HOH A 28 628 7 HOH HOH . E 4 HOH A 29 629 8 HOH HOH . E 4 HOH A 30 630 9 HOH HOH . E 4 HOH A 31 631 13 HOH HOH . E 4 HOH A 32 632 15 HOH HOH . E 4 HOH A 33 633 16 HOH HOH . E 4 HOH A 34 634 22 HOH HOH . E 4 HOH A 35 635 23 HOH HOH . E 4 HOH A 36 636 24 HOH HOH . E 4 HOH A 37 637 26 HOH HOH . E 4 HOH A 38 638 30 HOH HOH . E 4 HOH A 39 639 31 HOH HOH . E 4 HOH A 40 640 32 HOH HOH . E 4 HOH A 41 641 34 HOH HOH . E 4 HOH A 42 642 35 HOH HOH . E 4 HOH A 43 643 39 HOH HOH . E 4 HOH A 44 644 43 HOH HOH . E 4 HOH A 45 645 44 HOH HOH . E 4 HOH A 46 646 46 HOH HOH . E 4 HOH A 47 647 51 HOH HOH . E 4 HOH A 48 648 52 HOH HOH . E 4 HOH A 49 649 53 HOH HOH . E 4 HOH A 50 650 54 HOH HOH . E 4 HOH A 51 651 58 HOH HOH . E 4 HOH A 52 652 59 HOH HOH . E 4 HOH A 53 653 61 HOH HOH . E 4 HOH A 54 654 62 HOH HOH . E 4 HOH A 55 655 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 INS . . . B 2 82.455 36.612 50.241 0.87 67.73 ? C1 INS 501 A 1 HETATM 2 C C2 INS . . . B 2 82.809 37.18 51.592 0.87 72.99 ? C2 INS 501 A 1 HETATM 3 C C3 INS . . . B 2 81.87 36.612 52.616 0.87 78.36 ? C3 INS 501 A 1 HETATM 4 C C4 INS . . . B 2 82.105 35.133 52.791 0.87 76.71 ? C4 INS 501 A 1 HETATM 5 C C5 INS . . . B 2 82.072 34.342 51.493 0.87 73.76 ? C5 INS 501 A 1 HETATM 6 C C6 INS . . . B 2 82.399 35.094 50.203 0.87 68.63 ? C6 INS 501 A 1 HETATM 7 O O1 INS . . . B 2 83.406 37.057 49.316 0.87 61.23 ? O1 INS 501 A 1 HETATM 8 O O2 INS . . . B 2 84.16 36.944 51.923 0.87 70.63 ? O2 INS 501 A 1 HETATM 9 O O3 INS . . . B 2 81.948 37.306 53.84 0.87 83.85 ? O3 INS 501 A 1 HETATM 10 O O4 INS . . . B 2 81.152 34.627 53.695 0.87 78.41 ? O4 INS 501 A 1 HETATM 11 O O5 INS . . . B 2 82.956 33.253 51.633 0.87 74.81 ? O5 INS 501 A 1 HETATM 12 O O6 INS . . . B 2 81.557 34.692 49.15 0.87 68.73 ? O6 INS 501 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #