data_4WV7
#
_model_server_result.job_id            8rRL8RCQwH_NG30yMZHIvg 
_model_server_result.datetime_utc      '2024-12-27 11:50:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wv7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    4WV7 
#
_exptl.entry_id    4WV7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              334.45 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(5beta,6alpha,8alpha,14alpha)-13-ethenyl-5,6-dihydroxy-14-methylpodocarp-12-en-15-oic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4WV7 
_cell.length_a            67.536 
_cell.length_b            87.779 
_cell.length_c            52.453 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WV7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_and_software_defined_assembly 1 
? monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OE1 GLU 52 A GLU 444 1_555 C C5 3UM . A 3UM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale2 B OE1 GLU 52 B GLU 444 1_555 D C5 3UM . B 3UM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
#
_chem_comp.formula           'C20 H30 O4' 
_chem_comp.formula_weight    334.45 
_chem_comp.id                3UM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(5beta,6alpha,8alpha,14alpha)-13-ethenyl-5,6-dihydroxy-14-methylpodocarp-12-en-15-oic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C5 3UM sing 1 n n 
C12 C9 3UM sing 2 n n 
C5 C2 3UM sing 3 n n 
C9 C3 3UM sing 4 n n 
O4 C6 3UM doub 5 n n 
C6 C2 3UM sing 6 n n 
C6 O3 3UM sing 7 n n 
C2 C7 3UM sing 8 n n 
C2 C1 3UM sing 9 n n 
C10 C3 3UM sing 10 n n 
C3 C1 3UM sing 11 n n 
C3 C8 3UM sing 12 n n 
C14 C8 3UM sing 13 n n 
C14 C16 3UM sing 14 n n 
C1 O1 3UM sing 15 n n 
C1 C4 3UM sing 16 n n 
C8 C13 3UM sing 17 n n 
C16 C17 3UM doub 18 n n 
C4 O2 3UM sing 19 n n 
C4 C11 3UM sing 20 n n 
C13 C11 3UM sing 21 n n 
C13 C15 3UM sing 22 n n 
C17 C15 3UM sing 23 n n 
C17 C19 3UM sing 24 n n 
C15 C18 3UM sing 25 n n 
C19 C20 3UM doub 26 n n 
O1 H1 3UM sing 27 n n 
O2 H2 3UM sing 28 n n 
O3 H3 3UM sing 29 n n 
C11 H4 3UM sing 30 n n 
C11 H5 3UM sing 31 n n 
C12 H6 3UM sing 32 n n 
C12 H7 3UM sing 33 n n 
C13 H8 3UM sing 34 n n 
C14 H9 3UM sing 35 n n 
C14 H10 3UM sing 36 n n 
C15 H11 3UM sing 37 n n 
C16 H12 3UM sing 38 n n 
C18 H13 3UM sing 39 n n 
C18 H14 3UM sing 40 n n 
C18 H15 3UM sing 41 n n 
C19 H16 3UM sing 42 n n 
C20 H17 3UM sing 43 n n 
C20 H18 3UM sing 44 n n 
C4 H19 3UM sing 45 n n 
C5 H20 3UM sing 46 n n 
C5 H21 3UM sing 47 n n 
C7 H22 3UM sing 48 n n 
C7 H23 3UM sing 49 n n 
C7 H24 3UM sing 50 n n 
C8 H25 3UM sing 51 n n 
C9 H26 3UM sing 52 n n 
C9 H27 3UM sing 53 n n 
C10 H28 3UM sing 54 n n 
C10 H29 3UM sing 55 n n 
C10 H30 3UM sing 56 n n 
#
_atom_sites.entry_id                     4WV7 
_atom_sites.fract_transf_matrix[1][1]    0.014807 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011392 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019065 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 3UM A 1 601 1 3UM LI1 . 
D 2 3UM B 1 601 1 3UM LI1 . 
E 3 HOH A 1 701 11 HOH HOH . 
E 3 HOH A 2 702 48 HOH HOH . 
E 3 HOH A 3 703 28 HOH HOH . 
E 3 HOH A 4 704 24 HOH HOH . 
E 3 HOH A 5 705 77 HOH HOH . 
E 3 HOH A 6 706 40 HOH HOH . 
E 3 HOH A 7 707 5 HOH HOH . 
E 3 HOH A 8 708 7 HOH HOH . 
E 3 HOH A 9 709 10 HOH HOH . 
E 3 HOH A 10 710 21 HOH HOH . 
E 3 HOH A 11 711 27 HOH HOH . 
E 3 HOH A 12 712 29 HOH HOH . 
E 3 HOH A 13 713 30 HOH HOH . 
E 3 HOH A 14 714 31 HOH HOH . 
E 3 HOH A 15 715 34 HOH HOH . 
E 3 HOH A 16 716 35 HOH HOH . 
E 3 HOH A 17 717 36 HOH HOH . 
E 3 HOH A 18 718 37 HOH HOH . 
E 3 HOH A 19 719 39 HOH HOH . 
E 3 HOH A 20 720 42 HOH HOH . 
E 3 HOH A 21 721 44 HOH HOH . 
E 3 HOH A 22 722 49 HOH HOH . 
E 3 HOH A 23 723 50 HOH HOH . 
E 3 HOH A 24 724 51 HOH HOH . 
E 3 HOH A 25 725 53 HOH HOH . 
E 3 HOH A 26 726 54 HOH HOH . 
E 3 HOH A 27 727 57 HOH HOH . 
E 3 HOH A 28 728 60 HOH HOH . 
E 3 HOH A 29 729 64 HOH HOH . 
E 3 HOH A 30 730 68 HOH HOH . 
E 3 HOH A 31 731 69 HOH HOH . 
E 3 HOH A 32 732 72 HOH HOH . 
F 3 HOH B 1 701 22 HOH HOH . 
F 3 HOH B 2 702 70 HOH HOH . 
F 3 HOH B 3 703 55 HOH HOH . 
F 3 HOH B 4 704 46 HOH HOH . 
F 3 HOH B 5 705 56 HOH HOH . 
F 3 HOH B 6 706 6 HOH HOH . 
F 3 HOH B 7 707 12 HOH HOH . 
F 3 HOH B 8 708 76 HOH HOH . 
F 3 HOH B 9 709 16 HOH HOH . 
F 3 HOH B 10 710 20 HOH HOH . 
F 3 HOH B 11 711 74 HOH HOH . 
F 3 HOH B 12 712 14 HOH HOH . 
F 3 HOH B 13 713 47 HOH HOH . 
F 3 HOH B 14 714 75 HOH HOH . 
F 3 HOH B 15 715 58 HOH HOH . 
F 3 HOH B 16 716 25 HOH HOH . 
F 3 HOH B 17 717 66 HOH HOH . 
F 3 HOH B 18 718 71 HOH HOH . 
F 3 HOH B 19 719 1 HOH HOH . 
F 3 HOH B 20 720 2 HOH HOH . 
F 3 HOH B 21 721 3 HOH HOH . 
F 3 HOH B 22 722 4 HOH HOH . 
F 3 HOH B 23 723 8 HOH HOH . 
F 3 HOH B 24 724 9 HOH HOH . 
F 3 HOH B 25 725 13 HOH HOH . 
F 3 HOH B 26 726 15 HOH HOH . 
F 3 HOH B 27 727 17 HOH HOH . 
F 3 HOH B 28 728 18 HOH HOH . 
F 3 HOH B 29 729 19 HOH HOH . 
F 3 HOH B 30 730 23 HOH HOH . 
F 3 HOH B 31 731 26 HOH HOH . 
F 3 HOH B 32 732 32 HOH HOH . 
F 3 HOH B 33 733 33 HOH HOH . 
F 3 HOH B 34 734 38 HOH HOH . 
F 3 HOH B 35 735 41 HOH HOH . 
F 3 HOH B 36 736 43 HOH HOH . 
F 3 HOH B 37 737 45 HOH HOH . 
F 3 HOH B 38 738 52 HOH HOH . 
F 3 HOH B 39 739 59 HOH HOH . 
F 3 HOH B 40 740 61 HOH HOH . 
F 3 HOH B 41 741 62 HOH HOH . 
F 3 HOH B 42 742 65 HOH HOH . 
F 3 HOH B 43 743 67 HOH HOH . 
F 3 HOH B 44 744 73 HOH HOH . 
F 3 HOH B 45 745 78 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3UM . . . D 2 -21.519 -27.263 -11.336 1 43.15 ? C1 3UM 601 B 1 
HETATM 2 C C2 3UM . . . D 2 -22.778 -27.733 -10.476 1 42 ? C2 3UM 601 B 1 
HETATM 3 C C3 3UM . . . D 2 -20.103 -27.625 -10.69 1 40.62 ? C3 3UM 601 B 1 
HETATM 4 O O1 3UM . . . D 2 -21.606 -25.81 -11.435 1 44 ? O1 3UM 601 B 1 
HETATM 5 O O2 3UM . . . D 2 -21.522 -28.987 -13.304 1 44.52 ? O2 3UM 601 B 1 
HETATM 6 O O3 3UM . . . D 2 -23.192 -29.942 -11.384 1 41.6 ? O3 3UM 601 B 1 
HETATM 7 C C11 3UM . . . D 2 -20.452 -26.899 -13.644 1 43.77 ? C11 3UM 601 B 1 
HETATM 8 C C12 3UM . . . D 2 -21.281 -27.463 -8.338 1 42.47 ? C12 3UM 601 B 1 
HETATM 9 C C13 3UM . . . D 2 -19.062 -27.251 -13.053 1 41.16 ? C13 3UM 601 B 1 
HETATM 10 C C14 3UM . . . D 2 -17.51 -27.042 -10.981 1 41.07 ? C14 3UM 601 B 1 
HETATM 11 C C15 3UM . . . D 2 -17.964 -26.512 -13.862 1 38.37 ? C15 3UM 601 B 1 
HETATM 12 C C16 3UM . . . D 2 -16.412 -27.138 -12.025 1 40.08 ? C16 3UM 601 B 1 
HETATM 13 C C17 3UM . . . D 2 -16.597 -26.9 -13.339 1 39.41 ? C17 3UM 601 B 1 
HETATM 14 C C18 3UM . . . D 2 -18.072 -24.953 -13.879 1 36.87 ? C18 3UM 601 B 1 
HETATM 15 C C19 3UM . . . D 2 -15.453 -27.036 -14.277 1 40.43 ? C19 3UM 601 B 1 
HETATM 16 C C20 3UM . . . D 2 -15.498 -26.918 -15.607 1 38.5 ? C20 3UM 601 B 1 
HETATM 17 C C4 3UM . . . D 2 -21.596 -27.611 -12.878 1 43.86 ? C4 3UM 601 B 1 
HETATM 18 C C5 3UM . . . D 2 -22.662 -27.174 -9.011 1 43.32 ? C5 3UM 601 B 1 
HETATM 19 C C6 3UM . . . D 2 -23.037 -29.232 -10.35 1 43.33 ? C6 3UM 601 B 1 
HETATM 20 C C7 3UM . . . D 2 -24.108 -27.179 -11.095 1 37.96 ? C7 3UM 601 B 1 
HETATM 21 C C8 3UM . . . D 2 -18.978 -26.896 -11.525 1 41.64 ? C8 3UM 601 B 1 
HETATM 22 C C9 3UM . . . D 2 -20.056 -27.082 -9.219 1 40.12 ? C9 3UM 601 B 1 
HETATM 23 C C10 3UM . . . D 2 -19.778 -29.163 -10.625 1 39.97 ? C10 3UM 601 B 1 
HETATM 24 O O4 3UM . . . D 2 -23.094 -29.751 -9.197 1 44.9 ? O4 3UM 601 B 1 
#
_model_server_stats.io_time_ms              118 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           24 
#