data_4WVU
#
_model_server_result.job_id            UroodbpOONNlKaAxduoVSg 
_model_server_result.datetime_utc      '2024-11-04 20:58:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wvu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    4WVU 
#
_exptl.entry_id    4WVU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.51 
_cell.angle_gamma         90 
_cell.entry_id            4WVU 
_cell.length_a            28.261 
_cell.length_b            39.328 
_cell.length_c            33.058 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WVU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C MAA 1 B MAA 1 1_555 B N VAL 2 B VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale2 B C VAL 2 B VAL 2 1_555 B N 3V8 3 B 3V8 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale3 B C 3V8 3 B 3V8 3 1_555 B N PHE 4 B PHE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 B C10 3V8 3 B 3V8 3 1_555 B NZ HOX 5 B HOX 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? 
covale ? covale5 B C PHE 4 B PHE 4 1_555 B N HOX 5 B HOX 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
metalc ? metalc1 A SG CYS 67 A CYS 200 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc2 A SG CYS 70 A CYS 203 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc3 A NE2 HIS 87 A HIS 220 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc4 A SG CYS 94 A CYS 227 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 162 n n 
C1 C2 GOL sing 163 n n 
C1 H11 GOL sing 164 n n 
C1 H12 GOL sing 165 n n 
O1 HO1 GOL sing 166 n n 
C2 O2 GOL sing 167 n n 
C2 C3 GOL sing 168 n n 
C2 H2 GOL sing 169 n n 
O2 HO2 GOL sing 170 n n 
C3 O3 GOL sing 171 n n 
C3 H31 GOL sing 172 n n 
C3 H32 GOL sing 173 n n 
O3 HO3 GOL sing 174 n n 
#
_atom_sites.entry_id                     4WVU 
_atom_sites.fract_transf_matrix[1][1]    0.035384 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003413 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025427 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.03039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 301 502 ZN ZN . 
D 4 SO4 A 1 302 1 SO4 SO4 . 
E 5 GOL A 1 303 3 GOL GOL . 
F 6 HOH A 1 401 39 HOH HOH . 
F 6 HOH A 2 402 29 HOH HOH . 
F 6 HOH A 3 403 9 HOH HOH . 
F 6 HOH A 4 404 65 HOH HOH . 
F 6 HOH A 5 405 14 HOH HOH . 
F 6 HOH A 6 406 63 HOH HOH . 
F 6 HOH A 7 407 2 HOH HOH . 
F 6 HOH A 8 408 40 HOH HOH . 
F 6 HOH A 9 409 68 HOH HOH . 
F 6 HOH A 10 410 64 HOH HOH . 
F 6 HOH A 11 411 17 HOH HOH . 
F 6 HOH A 12 412 47 HOH HOH . 
F 6 HOH A 13 413 79 HOH HOH . 
F 6 HOH A 14 414 33 HOH HOH . 
F 6 HOH A 15 415 58 HOH HOH . 
F 6 HOH A 16 416 15 HOH HOH . 
F 6 HOH A 17 417 42 HOH HOH . 
F 6 HOH A 18 418 1 HOH HOH . 
F 6 HOH A 19 419 28 HOH HOH . 
F 6 HOH A 20 420 10 HOH HOH . 
F 6 HOH A 21 421 66 HOH HOH . 
F 6 HOH A 22 422 21 HOH HOH . 
F 6 HOH A 23 423 61 HOH HOH . 
F 6 HOH A 24 424 80 HOH HOH . 
F 6 HOH A 25 425 75 HOH HOH . 
F 6 HOH A 26 426 19 HOH HOH . 
F 6 HOH A 27 427 30 HOH HOH . 
F 6 HOH A 28 428 59 HOH HOH . 
F 6 HOH A 29 429 24 HOH HOH . 
F 6 HOH A 30 430 23 HOH HOH . 
F 6 HOH A 31 431 37 HOH HOH . 
F 6 HOH A 32 432 38 HOH HOH . 
F 6 HOH A 33 433 16 HOH HOH . 
F 6 HOH A 34 434 50 HOH HOH . 
F 6 HOH A 35 435 36 HOH HOH . 
F 6 HOH A 36 436 6 HOH HOH . 
F 6 HOH A 37 437 34 HOH HOH . 
F 6 HOH A 38 438 43 HOH HOH . 
F 6 HOH A 39 439 56 HOH HOH . 
F 6 HOH A 40 440 13 HOH HOH . 
F 6 HOH A 41 441 18 HOH HOH . 
F 6 HOH A 42 442 67 HOH HOH . 
F 6 HOH A 43 443 55 HOH HOH . 
F 6 HOH A 44 444 22 HOH HOH . 
F 6 HOH A 45 445 52 HOH HOH . 
F 6 HOH A 46 446 12 HOH HOH . 
F 6 HOH A 47 447 76 HOH HOH . 
F 6 HOH A 48 448 57 HOH HOH . 
F 6 HOH A 49 449 35 HOH HOH . 
F 6 HOH A 50 450 71 HOH HOH . 
F 6 HOH A 51 451 5 HOH HOH . 
F 6 HOH A 52 452 44 HOH HOH . 
F 6 HOH A 53 453 77 HOH HOH . 
F 6 HOH A 54 454 73 HOH HOH . 
F 6 HOH A 55 455 46 HOH HOH . 
F 6 HOH A 56 456 72 HOH HOH . 
F 6 HOH A 57 457 27 HOH HOH . 
F 6 HOH A 58 458 45 HOH HOH . 
F 6 HOH A 59 459 74 HOH HOH . 
F 6 HOH A 60 460 49 HOH HOH . 
F 6 HOH A 61 461 69 HOH HOH . 
F 6 HOH A 62 462 60 HOH HOH . 
F 6 HOH A 63 463 70 HOH HOH . 
F 6 HOH A 64 464 41 HOH HOH . 
F 6 HOH A 65 465 3 HOH HOH . 
F 6 HOH A 66 466 7 HOH HOH . 
F 6 HOH A 67 467 8 HOH HOH . 
F 6 HOH A 68 468 11 HOH HOH . 
F 6 HOH A 69 469 20 HOH HOH . 
F 6 HOH A 70 470 25 HOH HOH . 
F 6 HOH A 71 471 26 HOH HOH . 
F 6 HOH A 72 472 31 HOH HOH . 
F 6 HOH A 73 473 32 HOH HOH . 
F 6 HOH A 74 474 48 HOH HOH . 
F 6 HOH A 75 475 53 HOH HOH . 
F 6 HOH A 76 476 54 HOH HOH . 
F 6 HOH A 77 477 78 HOH HOH . 
G 6 HOH B 1 101 51 HOH HOH . 
G 6 HOH B 2 102 62 HOH HOH . 
G 6 HOH B 3 103 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 5 9.571 6.582 -3.285 1 13.49 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . E 5 9.957 7.921 -3.154 1 15.88 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . E 5 10.703 5.743 -3.812 1 15.18 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . E 5 11.826 5.785 -2.926 1 10.9 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . E 5 10.3 4.31 -4.069 1 15.86 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . E 5 10.936 3.922 -5.261 1 15.24 ? O3 GOL 303 A 1 
HETATM 7 H H11 GOL . . . E 5 9.246 6.217 -2.316 1 14.18 ? H11 GOL 303 A 1 
HETATM 8 H H12 GOL . . . E 5 8.719 6.507 -3.957 1 14.34 ? H12 GOL 303 A 1 
HETATM 9 H HO1 GOL . . . E 5 9.096 8.354 -2.925 1 15.69 ? HO1 GOL 303 A 1 
HETATM 10 H H2 GOL . . . E 5 11.098 6.206 -4.714 1 15.92 ? H2 GOL 303 A 1 
HETATM 11 H HO2 GOL . . . E 5 11.624 5.163 -2.182 1 9.81 ? HO2 GOL 303 A 1 
HETATM 12 H H31 GOL . . . E 5 10.574 3.636 -3.26 1 15.39 ? H31 GOL 303 A 1 
HETATM 13 H H32 GOL . . . E 5 9.22 4.219 -4.17 1 15.37 ? H32 GOL 303 A 1 
HETATM 14 H HO3 GOL . . . E 5 10.208 3.609 -5.86 1 15.44 ? HO3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#