data_4WWK
#
_model_server_result.job_id            7jWCZbSulBM8txo_lbFBYA 
_model_server_result.datetime_utc      '2024-10-10 16:26:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wwk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    4WWK 
#
_exptl.entry_id    4WWK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4WWK 
_cell.length_a            56.38 
_cell.length_b            76.07 
_cell.length_c            255.72 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WWK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 23 1_555 A SG CYS 90 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 B SG CYS 24 B CYS 23 1_555 B SG CYS 92 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 C SG CYS 103 C CYS 102 1_555 C SG CYS 167 C CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf4 D SG CYS 45 D CYS 25 1_555 D SG CYS 100 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
covale ? covale1 C ND2 ASN 21 C ASN 20 1_555 E C1 NAG . C NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale2 C ND2 ASN 43 C ASN 42 1_555 F C1 NAG . C NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 388 n n 
C1 O1 NAG sing 389 n n 
C1 O5 NAG sing 390 n n 
C1 H1 NAG sing 391 n n 
C2 C3 NAG sing 392 n n 
C2 N2 NAG sing 393 n n 
C2 H2 NAG sing 394 n n 
C3 C4 NAG sing 395 n n 
C3 O3 NAG sing 396 n n 
C3 H3 NAG sing 397 n n 
C4 C5 NAG sing 398 n n 
C4 O4 NAG sing 399 n n 
C4 H4 NAG sing 400 n n 
C5 C6 NAG sing 401 n n 
C5 O5 NAG sing 402 n n 
C5 H5 NAG sing 403 n n 
C6 O6 NAG sing 404 n n 
C6 H61 NAG sing 405 n n 
C6 H62 NAG sing 406 n n 
C7 C8 NAG sing 407 n n 
C7 N2 NAG sing 408 n n 
C7 O7 NAG doub 409 n n 
C8 H81 NAG sing 410 n n 
C8 H82 NAG sing 411 n n 
C8 H83 NAG sing 412 n n 
N2 HN2 NAG sing 413 n n 
O1 HO1 NAG sing 414 n n 
O3 HO3 NAG sing 415 n n 
O4 HO4 NAG sing 416 n n 
O6 HO6 NAG sing 417 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4WWK 
_atom_sites.fract_transf_matrix[1][1]    0.017737 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013146 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003911 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 NAG C 1 301 303 NAG NAG . 
F 5 NAG C 1 302 305 NAG NAG . 
G 6 JLS C 1 303 3000 JLS JLS . 
H 7 HOH C 1 401 3 HOH HOH . 
H 7 HOH C 2 402 2 HOH HOH . 
I 7 HOH D 1 101 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . E 5 32.308 24.556 308.482 1 31.63 ? C1 NAG 301 C 1 
HETATM 2 C C2 NAG . . . E 5 33.581 23.744 308.237 1 33.13 ? C2 NAG 301 C 1 
HETATM 3 C C3 NAG . . . E 5 34.723 24.619 307.721 1 34.33 ? C3 NAG 301 C 1 
HETATM 4 C C4 NAG . . . E 5 34.26 25.449 306.522 1 35.24 ? C4 NAG 301 C 1 
HETATM 5 C C5 NAG . . . E 5 32.991 26.231 306.857 1 32.93 ? C5 NAG 301 C 1 
HETATM 6 C C6 NAG . . . E 5 32.409 26.934 305.651 1 34.81 ? C6 NAG 301 C 1 
HETATM 7 C C7 NAG . . . E 5 33.596 21.746 309.684 1 33.94 ? C7 NAG 301 C 1 
HETATM 8 C C8 NAG . . . E 5 34.131 21.143 310.947 1 34.18 ? C8 NAG 301 C 1 
HETATM 9 N N2 NAG . . . E 5 33.992 23.006 309.422 1 32.45 ? N2 NAG 301 C 1 
HETATM 10 O O3 NAG . . . E 5 35.806 23.773 307.345 1 34.2 ? O3 NAG 301 C 1 
HETATM 11 O O4 NAG . . . E 5 35.282 26.347 306.097 1 37.15 ? O4 NAG 301 C 1 
HETATM 12 O O5 NAG . . . E 5 31.972 25.332 307.327 1 31.94 ? O5 NAG 301 C 1 
HETATM 13 O O6 NAG . . . E 5 31.06 27.332 305.868 1 35.27 ? O6 NAG 301 C 1 
HETATM 14 O O7 NAG . . . E 5 32.843 21.124 308.935 1 34.55 ? O7 NAG 301 C 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#