data_4WX7 # _model_server_result.job_id PKAzSJrKqH2smUinQ-Y5ZQ _model_server_result.datetime_utc '2024-11-22 21:09:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wx7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4WX7 # _exptl.entry_id 4WX7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 464.342 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[2-(3,5-dichlorophenyl)-2-methylpropanoyl]-N-(2-{[(2Z)-2-iminoethyl]amino}-2-oxoethyl)-4-methoxybenzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4WX7 _cell.length_a 40.793 _cell.length_b 40.793 _cell.length_c 191.752 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WX7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA DIMERIC 2 author_and_software_defined_assembly 1 PISA DIMERIC 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G 1 1 C,D,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 104 A CYS 104 1_555 B SG CYS 10 B CYS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 C SG CYS 104 C CYS 104 1_555 D SG CYS 10 D CYS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? covale ? covale1 A SG CYS 122 A CYS 122 1_555 E C30 3VJ . A 3VJ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? covale ? covale2 C SG CYS 122 C CYS 122 1_555 F C30 3VJ . C 3VJ 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.737 ? # _chem_comp.formula 'C22 H23 Cl2 N3 O4' _chem_comp.formula_weight 464.342 _chem_comp.id 3VJ _chem_comp.mon_nstd_flag . _chem_comp.name 3-[2-(3,5-dichlorophenyl)-2-methylpropanoyl]-N-(2-{[(2Z)-2-iminoethyl]amino}-2-oxoethyl)-4-methoxybenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N31 C30 3VJ doub 1 n n C30 C26 3VJ sing 2 n n C26 N25 3VJ sing 3 n n N25 C23 3VJ sing 4 n n C23 O24 3VJ doub 5 n n C23 C22 3VJ sing 6 n n C22 N20 3VJ sing 7 n n N20 C12 3VJ sing 8 n n C12 O21 3VJ doub 9 n n C12 C4 3VJ sing 10 n n C5 C6 3VJ doub 11 n y C5 C4 3VJ sing 12 n y C6 C1 3VJ sing 13 n y C4 C3 3VJ doub 14 n y C1 O11 3VJ sing 15 n n C1 C2 3VJ doub 16 n y C27 O11 3VJ sing 17 n n C3 C2 3VJ sing 18 n y C2 C7 3VJ sing 19 n n C28 C8 3VJ sing 20 n n CL1 C14 3VJ sing 21 n n C7 C8 3VJ sing 22 n n C7 O9 3VJ doub 23 n n C13 C14 3VJ doub 24 n y C13 C10 3VJ sing 25 n y C8 C10 3VJ sing 26 n n C8 C29 3VJ sing 27 n n C14 C15 3VJ sing 28 n y C10 C17 3VJ doub 29 n y C15 C16 3VJ doub 30 n y C17 C16 3VJ sing 31 n y C16 CL2 3VJ sing 32 n n C3 H1 3VJ sing 33 n n C13 H2 3VJ sing 34 n n C15 H3 3VJ sing 35 n n C17 H4 3VJ sing 36 n n C22 H5 3VJ sing 37 n n C22 H6 3VJ sing 38 n n C26 H7 3VJ sing 39 n n C26 H8 3VJ sing 40 n n C27 H9 3VJ sing 41 n n C27 H10 3VJ sing 42 n n C27 H11 3VJ sing 43 n n C28 H12 3VJ sing 44 n n C28 H13 3VJ sing 45 n n C28 H14 3VJ sing 46 n n C29 H15 3VJ sing 47 n n C29 H16 3VJ sing 48 n n C29 H17 3VJ sing 49 n n C30 H18 3VJ sing 50 n n C5 H19 3VJ sing 51 n n C6 H20 3VJ sing 52 n n N20 H21 3VJ sing 53 n n N25 H22 3VJ sing 54 n n N31 H23 3VJ sing 55 n n # _atom_sites.entry_id 4WX7 _atom_sites.fract_transf_matrix[1][1] 0.024514 _atom_sites.fract_transf_matrix[1][2] 0.014153 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 3VJ A 1 301 1 3VJ LI1 . F 3 3VJ C 1 301 1 3VJ LI1 . G 4 HOH A 1 401 9 HOH HOH . G 4 HOH A 2 402 14 HOH HOH . G 4 HOH A 3 403 1 HOH HOH . G 4 HOH A 4 404 10 HOH HOH . G 4 HOH A 5 405 2 HOH HOH . G 4 HOH A 6 406 4 HOH HOH . G 4 HOH A 7 407 11 HOH HOH . G 4 HOH A 8 408 15 HOH HOH . G 4 HOH A 9 409 17 HOH HOH . H 4 HOH C 1 401 7 HOH HOH . H 4 HOH C 2 402 12 HOH HOH . H 4 HOH C 3 403 3 HOH HOH . H 4 HOH C 4 404 6 HOH HOH . H 4 HOH C 5 405 8 HOH HOH . H 4 HOH C 6 406 13 HOH HOH . H 4 HOH C 7 407 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3VJ . . . E 3 33.619 51.469 -15.563 1 19.58 ? C1 3VJ 301 A 1 HETATM 2 C C2 3VJ . . . E 3 33.581 50.249 -14.836 1 20.51 ? C2 3VJ 301 A 1 HETATM 3 C C3 3VJ . . . E 3 33.194 49.059 -15.497 1 20.4 ? C3 3VJ 301 A 1 HETATM 4 C C12 3VJ . . . E 3 32.402 47.778 -17.558 1 18.88 ? C12 3VJ 301 A 1 HETATM 5 C C13 3VJ . . . E 3 35.513 47.043 -13.264 1 24.44 ? C13 3VJ 301 A 1 HETATM 6 C C14 3VJ . . . E 3 35.23 45.731 -12.9 1 24.64 ? C14 3VJ 301 A 1 HETATM 7 C C15 3VJ . . . E 3 34.384 45.429 -11.823 1 24.83 ? C15 3VJ 301 A 1 HETATM 8 C C16 3VJ . . . E 3 33.81 46.487 -11.107 1 24.42 ? C16 3VJ 301 A 1 HETATM 9 C C17 3VJ . . . E 3 34.107 47.816 -11.477 1 24.52 ? C17 3VJ 301 A 1 HETATM 10 C C22 3VJ . . . E 3 31.148 46.552 -19.31 1 19.47 ? C22 3VJ 301 A 1 HETATM 11 C C23 3VJ . . . E 3 29.847 46.951 -19.94 1 19.86 ? C23 3VJ 301 A 1 HETATM 12 C C26 3VJ . . . E 3 29.591 45.239 -21.79 1 19.51 ? C26 3VJ 301 A 1 HETATM 13 C C27 3VJ . . . E 3 34.053 53.978 -15.558 1 16.86 ? C27 3VJ 301 A 1 HETATM 14 C C28 3VJ . . . E 3 36.497 49.675 -13.959 1 20.96 ? C28 3VJ 301 A 1 HETATM 15 C C29 3VJ . . . E 3 35.802 50.371 -11.694 1 22.84 ? C29 3VJ 301 A 1 HETATM 16 C C30 3VJ . . . E 3 28.374 44.388 -21.827 1 18.99 ? C30 3VJ 301 A 1 HETATM 17 C C4 3VJ . . . E 3 32.829 49.061 -16.864 1 18.99 ? C4 3VJ 301 A 1 HETATM 18 C C5 3VJ . . . E 3 32.856 50.285 -17.544 1 19.79 ? C5 3VJ 301 A 1 HETATM 19 C C6 3VJ . . . E 3 33.245 51.475 -16.925 1 18.86 ? C6 3VJ 301 A 1 HETATM 20 C C7 3VJ . . . E 3 34.02 50.22 -13.391 1 21.34 ? C7 3VJ 301 A 1 HETATM 21 C C8 3VJ . . . E 3 35.311 49.566 -12.929 1 22.79 ? C8 3VJ 301 A 1 HETATM 22 O O9 3VJ . . . E 3 33.375 50.735 -12.507 1 21.28 ? O9 3VJ 301 A 1 HETATM 23 C C10 3VJ . . . E 3 34.979 48.115 -12.544 1 22.96 ? C10 3VJ 301 A 1 HETATM 24 O O11 3VJ . . . E 3 33.991 52.667 -14.913 1 19.3 ? O11 3VJ 301 A 1 HETATM 25 CL CL1 3VJ . . . E 3 35.947 44.46 -13.851 1 30.48 ? CL1 3VJ 301 A 1 HETATM 26 CL CL2 3VJ . . . E 3 32.77 46.181 -9.733 1 21.26 ? CL2 3VJ 301 A 1 HETATM 27 N N20 3VJ . . . E 3 31.566 47.787 -18.617 1 18.75 ? N20 3VJ 301 A 1 HETATM 28 O O21 3VJ . . . E 3 32.819 46.727 -17.118 1 17.67 ? O21 3VJ 301 A 1 HETATM 29 O O24 3VJ . . . E 3 29.326 47.903 -19.416 1 21.14 ? O24 3VJ 301 A 1 HETATM 30 N N25 3VJ . . . E 3 29.238 46.415 -21.019 1 20.72 ? N25 3VJ 301 A 1 HETATM 31 N N31 3VJ . . . E 3 27.966 43.956 -22.875 1 18.9 ? N31 3VJ 301 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #