data_4WXA # _model_server_result.job_id taoL3Tvr45v1WyEVo2BswA _model_server_result.datetime_utc '2024-11-23 08:56:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 4WXA # _exptl.entry_id 4WXA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.55 _cell.angle_gamma 90 _cell.entry_id 4WXA _cell.length_a 80.73 _cell.length_b 104.39 _cell.length_c 89.89 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? DIMERIC 2 author_defined_assembly 1 ? DIMERIC 2 author_defined_assembly 2 ? DIMERIC 2 author_defined_assembly 3 ? DIMERIC 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I 1 1 D,K 1 2 D,K 2 1 A,G,H,I 2 3 B,E,J 3 1 C,F 4 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_859 -x+3,y,-z+4 -1 0 0 0 1 0 0 0 -1 110.118927 0 334.425814 3 'crystal symmetry operation' 2_859 -x+3,y,-z+4 -1 0 0 0 1 0 0 0 -1 110.118927 0 334.425814 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 122 n n C1 C2 GOL sing 123 n n C1 H11 GOL sing 124 n n C1 H12 GOL sing 125 n n O1 HO1 GOL sing 126 n n C2 O2 GOL sing 127 n n C2 C3 GOL sing 128 n n C2 H2 GOL sing 129 n n O2 HO2 GOL sing 130 n n C3 O3 GOL sing 131 n n C3 H31 GOL sing 132 n n C3 H32 GOL sing 133 n n O3 HO3 GOL sing 134 n n # _atom_sites.entry_id 4WXA _atom_sites.fract_transf_matrix[1][1] 0.012387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004892 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL A 1 101 16 GOL GOL . H 4 ACT A 1 102 18 ACT ACT . I 5 HOH A 1 201 10 HOH HOH . I 5 HOH A 2 202 8 HOH HOH . I 5 HOH A 3 203 2 HOH HOH . I 5 HOH A 4 204 7 HOH HOH . I 5 HOH A 5 205 1 HOH HOH . I 5 HOH A 6 206 3 HOH HOH . I 5 HOH A 7 207 4 HOH HOH . I 5 HOH A 8 208 9 HOH HOH . I 5 HOH A 9 209 12 HOH HOH . I 5 HOH A 10 210 13 HOH HOH . I 5 HOH A 11 211 14 HOH HOH . J 5 HOH B 1 101 5 HOH HOH . J 5 HOH B 2 102 6 HOH HOH . K 5 HOH D 1 201 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 52.717 17.577 168.93 1 23.03 ? C1 GOL 101 A 1 HETATM 2 O O1 GOL . . . G 3 53.049 17.328 167.524 1 26.04 ? O1 GOL 101 A 1 HETATM 3 C C2 GOL . . . G 3 53.212 16.438 169.793 1 26.55 ? C2 GOL 101 A 1 HETATM 4 O O2 GOL . . . G 3 53.971 15.178 169.201 1 26.42 ? O2 GOL 101 A 1 HETATM 5 C C3 GOL . . . G 3 54.148 17.071 170.845 1 28.71 ? C3 GOL 101 A 1 HETATM 6 O O3 GOL . . . G 3 54.034 16.29 172.302 1 40.36 ? O3 GOL 101 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #