data_4WXP
#
_model_server_result.job_id            1KCo8JFyHM6PlKNK1tlLpg 
_model_server_result.datetime_utc      '2024-11-14 15:45:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4wxp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    4WXP 
#
_exptl.entry_id    4WXP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4WXP 
_cell.length_a            92.444 
_cell.length_b            92.444 
_cell.length_c            104.133 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4WXP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 208 A ASN 387 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.153 ? 
metalc ? metalc2 A OD1 ASN 208 A ASN 387 1_555 B NA NA . A NA 701 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc3 B NA NA . A NA 701 1_555 E O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4WXP 
_atom_sites.fract_transf_matrix[1][1]    0.010817 
_atom_sites.fract_transf_matrix[1][2]    0.006245 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012491 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009603 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 701 1 NA NA . 
C 3 CL A 1 702 2 CL CL . 
D 4 3VY A 1 703 1 3VY M05 . 
E 5 HOH A 1 801 88 HOH HOH . 
E 5 HOH A 2 802 98 HOH HOH . 
E 5 HOH A 3 803 118 HOH HOH . 
E 5 HOH A 4 804 74 HOH HOH . 
E 5 HOH A 5 805 24 HOH HOH . 
E 5 HOH A 6 806 78 HOH HOH . 
E 5 HOH A 7 807 35 HOH HOH . 
E 5 HOH A 8 808 12 HOH HOH . 
E 5 HOH A 9 809 82 HOH HOH . 
E 5 HOH A 10 810 94 HOH HOH . 
E 5 HOH A 11 811 22 HOH HOH . 
E 5 HOH A 12 812 52 HOH HOH . 
E 5 HOH A 13 813 61 HOH HOH . 
E 5 HOH A 14 814 55 HOH HOH . 
E 5 HOH A 15 815 9 HOH HOH . 
E 5 HOH A 16 816 133 HOH HOH . 
E 5 HOH A 17 817 99 HOH HOH . 
E 5 HOH A 18 818 117 HOH HOH . 
E 5 HOH A 19 819 36 HOH HOH . 
E 5 HOH A 20 820 50 HOH HOH . 
E 5 HOH A 21 821 47 HOH HOH . 
E 5 HOH A 22 822 134 HOH HOH . 
E 5 HOH A 23 823 30 HOH HOH . 
E 5 HOH A 24 824 28 HOH HOH . 
E 5 HOH A 25 825 132 HOH HOH . 
E 5 HOH A 26 826 3 HOH HOH . 
E 5 HOH A 27 827 4 HOH HOH . 
E 5 HOH A 28 828 5 HOH HOH . 
E 5 HOH A 29 829 6 HOH HOH . 
E 5 HOH A 30 830 7 HOH HOH . 
E 5 HOH A 31 831 8 HOH HOH . 
E 5 HOH A 32 832 10 HOH HOH . 
E 5 HOH A 33 833 11 HOH HOH . 
E 5 HOH A 34 834 13 HOH HOH . 
E 5 HOH A 35 835 14 HOH HOH . 
E 5 HOH A 36 836 15 HOH HOH . 
E 5 HOH A 37 837 16 HOH HOH . 
E 5 HOH A 38 838 17 HOH HOH . 
E 5 HOH A 39 839 18 HOH HOH . 
E 5 HOH A 40 840 19 HOH HOH . 
E 5 HOH A 41 841 20 HOH HOH . 
E 5 HOH A 42 842 21 HOH HOH . 
E 5 HOH A 43 843 23 HOH HOH . 
E 5 HOH A 44 844 25 HOH HOH . 
E 5 HOH A 45 845 26 HOH HOH . 
E 5 HOH A 46 846 27 HOH HOH . 
E 5 HOH A 47 847 29 HOH HOH . 
E 5 HOH A 48 848 31 HOH HOH . 
E 5 HOH A 49 849 32 HOH HOH . 
E 5 HOH A 50 850 33 HOH HOH . 
E 5 HOH A 51 851 37 HOH HOH . 
E 5 HOH A 52 852 38 HOH HOH . 
E 5 HOH A 53 853 39 HOH HOH . 
E 5 HOH A 54 854 40 HOH HOH . 
E 5 HOH A 55 855 42 HOH HOH . 
E 5 HOH A 56 856 43 HOH HOH . 
E 5 HOH A 57 857 44 HOH HOH . 
E 5 HOH A 58 858 48 HOH HOH . 
E 5 HOH A 59 859 49 HOH HOH . 
E 5 HOH A 60 860 51 HOH HOH . 
E 5 HOH A 61 861 53 HOH HOH . 
E 5 HOH A 62 862 54 HOH HOH . 
E 5 HOH A 63 863 56 HOH HOH . 
E 5 HOH A 64 864 57 HOH HOH . 
E 5 HOH A 65 865 58 HOH HOH . 
E 5 HOH A 66 866 60 HOH HOH . 
E 5 HOH A 67 867 62 HOH HOH . 
E 5 HOH A 68 868 64 HOH HOH . 
E 5 HOH A 69 869 66 HOH HOH . 
E 5 HOH A 70 870 67 HOH HOH . 
E 5 HOH A 71 871 68 HOH HOH . 
E 5 HOH A 72 872 69 HOH HOH . 
E 5 HOH A 73 873 70 HOH HOH . 
E 5 HOH A 74 874 72 HOH HOH . 
E 5 HOH A 75 875 73 HOH HOH . 
E 5 HOH A 76 876 75 HOH HOH . 
E 5 HOH A 77 877 76 HOH HOH . 
E 5 HOH A 78 878 77 HOH HOH . 
E 5 HOH A 79 879 79 HOH HOH . 
E 5 HOH A 80 880 81 HOH HOH . 
E 5 HOH A 81 881 83 HOH HOH . 
E 5 HOH A 82 882 84 HOH HOH . 
E 5 HOH A 83 883 85 HOH HOH . 
E 5 HOH A 84 884 86 HOH HOH . 
E 5 HOH A 85 885 89 HOH HOH . 
E 5 HOH A 86 886 90 HOH HOH . 
E 5 HOH A 87 887 93 HOH HOH . 
E 5 HOH A 88 888 95 HOH HOH . 
E 5 HOH A 89 889 96 HOH HOH . 
E 5 HOH A 90 890 97 HOH HOH . 
E 5 HOH A 91 891 101 HOH HOH . 
E 5 HOH A 92 892 103 HOH HOH . 
E 5 HOH A 93 893 104 HOH HOH . 
E 5 HOH A 94 894 105 HOH HOH . 
E 5 HOH A 95 895 107 HOH HOH . 
E 5 HOH A 96 896 108 HOH HOH . 
E 5 HOH A 97 897 109 HOH HOH . 
E 5 HOH A 98 898 110 HOH HOH . 
E 5 HOH A 99 899 111 HOH HOH . 
E 5 HOH A 100 900 112 HOH HOH . 
E 5 HOH A 101 901 113 HOH HOH . 
E 5 HOH A 102 902 114 HOH HOH . 
E 5 HOH A 103 903 115 HOH HOH . 
E 5 HOH A 104 904 116 HOH HOH . 
E 5 HOH A 105 905 119 HOH HOH . 
E 5 HOH A 106 906 120 HOH HOH . 
E 5 HOH A 107 907 123 HOH HOH . 
E 5 HOH A 108 908 126 HOH HOH . 
E 5 HOH A 109 909 127 HOH HOH . 
E 5 HOH A 110 910 128 HOH HOH . 
E 5 HOH A 111 911 130 HOH HOH . 
E 5 HOH A 112 912 131 HOH HOH . 
E 5 HOH A 113 913 135 HOH HOH . 
E 5 HOH A 114 914 136 HOH HOH . 
E 5 HOH A 115 915 137 HOH HOH . 
E 5 HOH A 116 916 138 HOH HOH . 
E 5 HOH A 117 917 139 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -3.199 
_atom_site.Cartn_y               -4.71 
_atom_site.Cartn_z               -0.513 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        71.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           701 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           358 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#