data_4WXR # _model_server_result.job_id tenZnPovvNcP-xJePu6W4w _model_server_result.datetime_utc '2024-10-19 22:27:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 4WXR # _exptl.entry_id 4WXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 413.511 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{6-(3,5-diaminophenyl)-1-[4-(propan-2-yl)benzyl]-1H-indol-3-yl}acetic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.52 _cell.angle_gamma 90 _cell.entry_id 4WXR _cell.length_a 124.074 _cell.length_b 112.776 _cell.length_c 99.592 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_and_software_defined_assembly 1 ? monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C26 H27 N3 O2' _chem_comp.formula_weight 413.511 _chem_comp.id 3VZ _chem_comp.mon_nstd_flag . _chem_comp.name '{6-(3,5-diaminophenyl)-1-[4-(propan-2-yl)benzyl]-1H-indol-3-yl}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O60 C59 3VZ doub 1 n n C59 C58 3VZ sing 2 n n C59 O64 3VZ sing 3 n n C58 C15 3VZ sing 4 n n C1 C6 3VZ doub 5 n y C1 C2 3VZ sing 6 n y C15 C2 3VZ sing 7 n y C15 C14 3VZ doub 8 n y C6 C5 3VZ sing 9 n y C2 C3 3VZ doub 10 n y C14 N13 3VZ sing 11 n y C5 C4 3VZ doub 12 n y C5 C20 3VZ sing 13 n n C3 N13 3VZ sing 14 n y C3 C4 3VZ sing 15 n y N13 C37 3VZ sing 16 n n C26 C20 3VZ doub 17 n y C26 C25 3VZ sing 18 n y C20 C22 3VZ sing 19 n y N33 C25 3VZ sing 20 n n C25 C24 3VZ doub 21 n y C54 C52 3VZ sing 22 n n C22 C23 3VZ doub 23 n y C37 C38 3VZ sing 24 n n C38 C41 3VZ doub 25 n y C38 C45 3VZ sing 26 n y C41 C42 3VZ sing 27 n y C45 C44 3VZ doub 28 n y C42 C43 3VZ doub 29 n y C24 C23 3VZ sing 30 n y C44 C43 3VZ sing 31 n y C43 C52 3VZ sing 32 n n C23 N35 3VZ sing 33 n n C52 C56 3VZ sing 34 n n C1 H1 3VZ sing 35 n n C4 H2 3VZ sing 36 n n C14 H3 3VZ sing 37 n n C22 H4 3VZ sing 38 n n C24 H5 3VZ sing 39 n n O64 H6 3VZ sing 40 n n C58 H7 3VZ sing 41 n n C58 H8 3VZ sing 42 n n C37 H9 3VZ sing 43 n n C37 H10 3VZ sing 44 n n C41 H11 3VZ sing 45 n n C42 H12 3VZ sing 46 n n C52 H13 3VZ sing 47 n n C54 H14 3VZ sing 48 n n C54 H15 3VZ sing 49 n n C54 H16 3VZ sing 50 n n C56 H17 3VZ sing 51 n n C56 H18 3VZ sing 52 n n C56 H19 3VZ sing 53 n n C44 H20 3VZ sing 54 n n C45 H21 3VZ sing 55 n n C6 H22 3VZ sing 56 n n N35 H23 3VZ sing 57 n n N35 H24 3VZ sing 58 n n N33 H25 3VZ sing 59 n n N33 H26 3VZ sing 60 n n C26 H27 3VZ sing 61 n n # _atom_sites.entry_id 4WXR _atom_sites.fract_transf_matrix[1][1] 0.00806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005969 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008867 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3VZ A 1 701 1 3VZ 710 . D 2 3VZ B 1 701 1 3VZ 710 . E 3 HOH A 1 801 33 HOH HOH . E 3 HOH A 2 802 83 HOH HOH . E 3 HOH A 3 803 137 HOH HOH . E 3 HOH A 4 804 90 HOH HOH . E 3 HOH A 5 805 93 HOH HOH . E 3 HOH A 6 806 27 HOH HOH . E 3 HOH A 7 807 72 HOH HOH . E 3 HOH A 8 808 53 HOH HOH . E 3 HOH A 9 809 129 HOH HOH . E 3 HOH A 10 810 186 HOH HOH . E 3 HOH A 11 811 32 HOH HOH . E 3 HOH A 12 812 171 HOH HOH . E 3 HOH A 13 813 170 HOH HOH . E 3 HOH A 14 814 148 HOH HOH . E 3 HOH A 15 815 6 HOH HOH . E 3 HOH A 16 816 7 HOH HOH . E 3 HOH A 17 817 9 HOH HOH . E 3 HOH A 18 818 11 HOH HOH . E 3 HOH A 19 819 16 HOH HOH . E 3 HOH A 20 820 17 HOH HOH . E 3 HOH A 21 821 28 HOH HOH . E 3 HOH A 22 822 29 HOH HOH . E 3 HOH A 23 823 30 HOH HOH . E 3 HOH A 24 824 39 HOH HOH . E 3 HOH A 25 825 43 HOH HOH . E 3 HOH A 26 826 44 HOH HOH . E 3 HOH A 27 827 45 HOH HOH . E 3 HOH A 28 828 48 HOH HOH . E 3 HOH A 29 829 49 HOH HOH . E 3 HOH A 30 830 50 HOH HOH . E 3 HOH A 31 831 52 HOH HOH . E 3 HOH A 32 832 57 HOH HOH . E 3 HOH A 33 833 58 HOH HOH . E 3 HOH A 34 834 59 HOH HOH . E 3 HOH A 35 835 62 HOH HOH . E 3 HOH A 36 836 63 HOH HOH . E 3 HOH A 37 837 65 HOH HOH . E 3 HOH A 38 838 67 HOH HOH . E 3 HOH A 39 839 68 HOH HOH . E 3 HOH A 40 840 69 HOH HOH . E 3 HOH A 41 841 70 HOH HOH . E 3 HOH A 42 842 76 HOH HOH . E 3 HOH A 43 843 77 HOH HOH . E 3 HOH A 44 844 79 HOH HOH . E 3 HOH A 45 845 80 HOH HOH . E 3 HOH A 46 846 81 HOH HOH . E 3 HOH A 47 847 84 HOH HOH . E 3 HOH A 48 848 85 HOH HOH . E 3 HOH A 49 849 86 HOH HOH . E 3 HOH A 50 850 87 HOH HOH . E 3 HOH A 51 851 89 HOH HOH . E 3 HOH A 52 852 94 HOH HOH . E 3 HOH A 53 853 95 HOH HOH . E 3 HOH A 54 854 96 HOH HOH . E 3 HOH A 55 855 98 HOH HOH . E 3 HOH A 56 856 99 HOH HOH . E 3 HOH A 57 857 104 HOH HOH . E 3 HOH A 58 858 105 HOH HOH . E 3 HOH A 59 859 107 HOH HOH . E 3 HOH A 60 860 108 HOH HOH . E 3 HOH A 61 861 111 HOH HOH . E 3 HOH A 62 862 113 HOH HOH . E 3 HOH A 63 863 115 HOH HOH . E 3 HOH A 64 864 118 HOH HOH . E 3 HOH A 65 865 119 HOH HOH . E 3 HOH A 66 866 120 HOH HOH . E 3 HOH A 67 867 125 HOH HOH . E 3 HOH A 68 868 126 HOH HOH . E 3 HOH A 69 869 128 HOH HOH . E 3 HOH A 70 870 131 HOH HOH . E 3 HOH A 71 871 136 HOH HOH . E 3 HOH A 72 872 138 HOH HOH . E 3 HOH A 73 873 139 HOH HOH . E 3 HOH A 74 874 141 HOH HOH . E 3 HOH A 75 875 142 HOH HOH . E 3 HOH A 76 876 144 HOH HOH . E 3 HOH A 77 877 145 HOH HOH . E 3 HOH A 78 878 146 HOH HOH . E 3 HOH A 79 879 149 HOH HOH . E 3 HOH A 80 880 151 HOH HOH . E 3 HOH A 81 881 152 HOH HOH . E 3 HOH A 82 882 153 HOH HOH . E 3 HOH A 83 883 155 HOH HOH . E 3 HOH A 84 884 160 HOH HOH . E 3 HOH A 85 885 161 HOH HOH . E 3 HOH A 86 886 164 HOH HOH . E 3 HOH A 87 887 169 HOH HOH . E 3 HOH A 88 888 175 HOH HOH . E 3 HOH A 89 889 180 HOH HOH . E 3 HOH A 90 890 182 HOH HOH . E 3 HOH A 91 891 185 HOH HOH . F 3 HOH B 1 801 66 HOH HOH . F 3 HOH B 2 802 150 HOH HOH . F 3 HOH B 3 803 178 HOH HOH . F 3 HOH B 4 804 116 HOH HOH . F 3 HOH B 5 805 54 HOH HOH . F 3 HOH B 6 806 47 HOH HOH . F 3 HOH B 7 807 181 HOH HOH . F 3 HOH B 8 808 23 HOH HOH . F 3 HOH B 9 809 34 HOH HOH . F 3 HOH B 10 810 106 HOH HOH . F 3 HOH B 11 811 173 HOH HOH . F 3 HOH B 12 812 159 HOH HOH . F 3 HOH B 13 813 176 HOH HOH . F 3 HOH B 14 814 122 HOH HOH . F 3 HOH B 15 815 1 HOH HOH . F 3 HOH B 16 816 2 HOH HOH . F 3 HOH B 17 817 3 HOH HOH . F 3 HOH B 18 818 4 HOH HOH . F 3 HOH B 19 819 5 HOH HOH . F 3 HOH B 20 820 8 HOH HOH . F 3 HOH B 21 821 10 HOH HOH . F 3 HOH B 22 822 12 HOH HOH . F 3 HOH B 23 823 14 HOH HOH . F 3 HOH B 24 824 15 HOH HOH . F 3 HOH B 25 825 18 HOH HOH . F 3 HOH B 26 826 19 HOH HOH . F 3 HOH B 27 827 20 HOH HOH . F 3 HOH B 28 828 21 HOH HOH . F 3 HOH B 29 829 22 HOH HOH . F 3 HOH B 30 830 24 HOH HOH . F 3 HOH B 31 831 25 HOH HOH . F 3 HOH B 32 832 26 HOH HOH . F 3 HOH B 33 833 31 HOH HOH . F 3 HOH B 34 834 35 HOH HOH . F 3 HOH B 35 835 36 HOH HOH . F 3 HOH B 36 836 37 HOH HOH . F 3 HOH B 37 837 38 HOH HOH . F 3 HOH B 38 838 40 HOH HOH . F 3 HOH B 39 839 41 HOH HOH . F 3 HOH B 40 840 42 HOH HOH . F 3 HOH B 41 841 46 HOH HOH . F 3 HOH B 42 842 51 HOH HOH . F 3 HOH B 43 843 55 HOH HOH . F 3 HOH B 44 844 56 HOH HOH . F 3 HOH B 45 845 60 HOH HOH . F 3 HOH B 46 846 61 HOH HOH . F 3 HOH B 47 847 64 HOH HOH . F 3 HOH B 48 848 71 HOH HOH . F 3 HOH B 49 849 73 HOH HOH . F 3 HOH B 50 850 74 HOH HOH . F 3 HOH B 51 851 75 HOH HOH . F 3 HOH B 52 852 78 HOH HOH . F 3 HOH B 53 853 82 HOH HOH . F 3 HOH B 54 854 88 HOH HOH . F 3 HOH B 55 855 91 HOH HOH . F 3 HOH B 56 856 92 HOH HOH . F 3 HOH B 57 857 97 HOH HOH . F 3 HOH B 58 858 100 HOH HOH . F 3 HOH B 59 859 101 HOH HOH . F 3 HOH B 60 860 102 HOH HOH . F 3 HOH B 61 861 103 HOH HOH . F 3 HOH B 62 862 109 HOH HOH . F 3 HOH B 63 863 110 HOH HOH . F 3 HOH B 64 864 112 HOH HOH . F 3 HOH B 65 865 114 HOH HOH . F 3 HOH B 66 866 117 HOH HOH . F 3 HOH B 67 867 121 HOH HOH . F 3 HOH B 68 868 123 HOH HOH . F 3 HOH B 69 869 124 HOH HOH . F 3 HOH B 70 870 130 HOH HOH . F 3 HOH B 71 871 132 HOH HOH . F 3 HOH B 72 872 133 HOH HOH . F 3 HOH B 73 873 140 HOH HOH . F 3 HOH B 74 874 143 HOH HOH . F 3 HOH B 75 875 147 HOH HOH . F 3 HOH B 76 876 154 HOH HOH . F 3 HOH B 77 877 156 HOH HOH . F 3 HOH B 78 878 157 HOH HOH . F 3 HOH B 79 879 163 HOH HOH . F 3 HOH B 80 880 165 HOH HOH . F 3 HOH B 81 881 166 HOH HOH . F 3 HOH B 82 882 167 HOH HOH . F 3 HOH B 83 883 172 HOH HOH . F 3 HOH B 84 884 177 HOH HOH . F 3 HOH B 85 885 179 HOH HOH . F 3 HOH B 86 886 183 HOH HOH . F 3 HOH B 87 887 184 HOH HOH . F 3 HOH B 88 888 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3VZ . . . D 2 23.263 -33.672 24.485 1 40.61 ? C1 3VZ 701 B 1 HETATM 2 C C2 3VZ . . . D 2 22.144 -33.264 25.215 1 40.96 ? C2 3VZ 701 B 1 HETATM 3 C C3 3VZ . . . D 2 22.245 -32.93 26.571 1 41.69 ? C3 3VZ 701 B 1 HETATM 4 C C4 3VZ . . . D 2 23.486 -32.974 27.217 1 41.68 ? C4 3VZ 701 B 1 HETATM 5 C C5 3VZ . . . D 2 24.62 -33.355 26.484 1 42.23 ? C5 3VZ 701 B 1 HETATM 6 C C14 3VZ . . . D 2 20.13 -32.723 25.983 1 40.42 ? C14 3VZ 701 B 1 HETATM 7 C C15 3VZ . . . D 2 20.804 -33.144 24.829 1 40.24 ? C15 3VZ 701 B 1 HETATM 8 C C20 3VZ . . . D 2 25.973 -33.423 27.111 1 42.91 ? C20 3VZ 701 B 1 HETATM 9 C C22 3VZ . . . D 2 26.52 -32.346 27.821 1 42.93 ? C22 3VZ 701 B 1 HETATM 10 C C23 3VZ . . . D 2 27.801 -32.463 28.375 1 42.42 ? C23 3VZ 701 B 1 HETATM 11 C C24 3VZ . . . D 2 28.529 -33.652 28.222 1 43.38 ? C24 3VZ 701 B 1 HETATM 12 C C25 3VZ . . . D 2 27.977 -34.726 27.506 1 44.61 ? C25 3VZ 701 B 1 HETATM 13 O O60 3VZ . . . D 2 21.038 -35.651 23.606 1 38.6 ? O60 3VZ 701 B 1 HETATM 14 C C59 3VZ . . . D 2 20.853 -34.684 22.85 1 36.4 ? C59 3VZ 701 B 1 HETATM 15 O O64 3VZ . . . D 2 21.192 -34.761 21.645 1 33.75 ? O64 3VZ 701 B 1 HETATM 16 C C58 3VZ . . . D 2 20.218 -33.428 23.446 1 37.26 ? C58 3VZ 701 B 1 HETATM 17 N N13 3VZ . . . D 2 21.024 -32.604 27 1 42.09 ? N13 3VZ 701 B 1 HETATM 18 C C37 3VZ . . . D 2 20.793 -32.183 28.384 1 44.06 ? C37 3VZ 701 B 1 HETATM 19 C C38 3VZ . . . D 2 19.347 -32.112 28.814 1 46.71 ? C38 3VZ 701 B 1 HETATM 20 C C41 3VZ . . . D 2 18.809 -30.864 29.109 1 46.94 ? C41 3VZ 701 B 1 HETATM 21 C C42 3VZ . . . D 2 17.484 -30.758 29.511 1 48.38 ? C42 3VZ 701 B 1 HETATM 22 C C43 3VZ . . . D 2 16.679 -31.893 29.628 1 48.03 ? C43 3VZ 701 B 1 HETATM 23 C C52 3VZ . . . D 2 15.27 -31.719 30.098 1 47.4 ? C52 3VZ 701 B 1 HETATM 24 C C54 3VZ . . . D 2 14.268 -32.498 29.244 1 47.35 ? C54 3VZ 701 B 1 HETATM 25 C C56 3VZ . . . D 2 15.193 -32.106 31.586 1 44.53 ? C56 3VZ 701 B 1 HETATM 26 C C44 3VZ . . . D 2 17.227 -33.147 29.341 1 49.39 ? C44 3VZ 701 B 1 HETATM 27 C C45 3VZ . . . D 2 18.562 -33.266 28.93 1 48.79 ? C45 3VZ 701 B 1 HETATM 28 C C6 3VZ . . . D 2 24.505 -33.705 25.124 1 42.44 ? C6 3VZ 701 B 1 HETATM 29 N N35 3VZ . . . D 2 28.323 -31.409 29.04 1 38.69 ? N35 3VZ 701 B 1 HETATM 30 N N33 3VZ . . . D 2 28.636 -35.903 27.316 1 46.16 ? N33 3VZ 701 B 1 HETATM 31 C C26 3VZ . . . D 2 26.711 -34.6 26.958 1 44.08 ? C26 3VZ 701 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #