data_4WZ2 # _model_server_result.job_id sX93a4WgVMc492XM9LE7EA _model_server_result.datetime_utc '2025-09-12 13:42:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wz2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 4WZ2 # _exptl.entry_id 4WZ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WZ2 _cell.length_a 160.033 _cell.length_b 160.033 _cell.length_c 160.033 _cell.Z_PDB 72 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WZ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_and_software_defined_assembly 1 ? monomeric 1 author_and_software_defined_assembly 2 ? monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J 1 1 B,F,G,H,K 2 1 C,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 73 A SER 174 1_555 A N MSE 74 A MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 74 A MSE 175 1_555 A N ASP 75 A ASP 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C SER 73 B SER 174 1_555 B N MSE 74 B MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C MSE 74 B MSE 175 1_555 B N ASP 75 B ASP 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 C C SER 73 C SER 174 1_555 C N MSE 74 C MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? covale ? covale6 C C MSE 74 C MSE 175 1_555 C N ASP 75 C ASP 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 129 n n O1 HO1 HEZ sing 130 n n C1 C2 HEZ sing 131 n n C1 H11 HEZ sing 132 n n C1 H12 HEZ sing 133 n n C2 C3 HEZ sing 134 n n C2 H21 HEZ sing 135 n n C2 H22 HEZ sing 136 n n C3 C4 HEZ sing 137 n n C3 H31 HEZ sing 138 n n C3 H32 HEZ sing 139 n n C4 C5 HEZ sing 140 n n C4 H41 HEZ sing 141 n n C4 H42 HEZ sing 142 n n C5 C6 HEZ sing 143 n n C5 H51 HEZ sing 144 n n C5 H52 HEZ sing 145 n n C6 O6 HEZ sing 146 n n C6 H61 HEZ sing 147 n n C6 H62 HEZ sing 148 n n O6 HO6 HEZ sing 149 n n # _atom_sites.entry_id 4WZ2 _atom_sites.fract_transf_matrix[1][1] 0.006249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HEZ A 1 301 1 HEZ HEZ . E 3 CL A 1 302 1 CL CL . F 2 HEZ B 1 301 2 HEZ HEZ . G 2 HEZ B 1 302 3 HEZ HEZ . H 2 HEZ B 1 303 4 HEZ HEZ . I 3 CL C 1 301 2 CL CL . J 4 HOH A 1 401 30 HOH HOH . J 4 HOH A 2 402 2 HOH HOH . J 4 HOH A 3 403 16 HOH HOH . J 4 HOH A 4 404 17 HOH HOH . J 4 HOH A 5 405 31 HOH HOH . K 4 HOH B 1 401 4 HOH HOH . K 4 HOH B 2 402 25 HOH HOH . K 4 HOH B 3 403 3 HOH HOH . K 4 HOH B 4 404 10 HOH HOH . K 4 HOH B 5 405 11 HOH HOH . K 4 HOH B 6 406 27 HOH HOH . K 4 HOH B 7 407 29 HOH HOH . L 4 HOH C 1 401 14 HOH HOH . L 4 HOH C 2 402 21 HOH HOH . L 4 HOH C 3 403 1 HOH HOH . L 4 HOH C 4 404 5 HOH HOH . L 4 HOH C 5 405 6 HOH HOH . L 4 HOH C 6 406 7 HOH HOH . L 4 HOH C 7 407 8 HOH HOH . L 4 HOH C 8 408 9 HOH HOH . L 4 HOH C 9 409 12 HOH HOH . L 4 HOH C 10 410 15 HOH HOH . L 4 HOH C 11 411 26 HOH HOH . L 4 HOH C 12 412 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . D 2 25.575 37.403 69.707 1 64.6 ? O1 HEZ 301 A 1 HETATM 2 C C1 HEZ . . . D 2 26.345 36.42 70.363 1 59.21 ? C1 HEZ 301 A 1 HETATM 3 C C2 HEZ . . . D 2 27.463 35.971 69.449 1 39.77 ? C2 HEZ 301 A 1 HETATM 4 C C3 HEZ . . . D 2 26.916 35.749 68.056 1 29.34 ? C3 HEZ 301 A 1 HETATM 5 C C4 HEZ . . . D 2 28.054 35.417 67.116 1 29.29 ? C4 HEZ 301 A 1 HETATM 6 C C5 HEZ . . . D 2 28.731 34.142 67.57 1 26.13 ? C5 HEZ 301 A 1 HETATM 7 C C6 HEZ . . . D 2 29.993 33.923 66.764 1 19.66 ? C6 HEZ 301 A 1 HETATM 8 O O6 HEZ . . . D 2 30.906 33.152 67.515 1 20.1 ? O6 HEZ 301 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #