data_4WZH # _model_server_result.job_id ts-d0UETOdD7V6pUQafj5g _model_server_result.datetime_utc '2024-10-19 07:25:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4wzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4WZH # _exptl.entry_id 4WZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4WZH _cell.length_a 61.16 _cell.length_b 105.69 _cell.length_c 106.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 4WZH _atom_sites.fract_transf_matrix[1][1] 0.016351 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009462 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 401 1 FMN FMN . D 3 EPE A 1 402 1 EPE EPE . E 2 FMN B 1 401 2 FMN FMN . F 4 GOL B 1 402 1 GOL GOL . G 5 HOH A 1 501 186 HOH HOH . G 5 HOH A 2 502 91 HOH HOH . G 5 HOH A 3 503 169 HOH HOH . G 5 HOH A 4 504 12 HOH HOH . G 5 HOH A 5 505 126 HOH HOH . G 5 HOH A 6 506 205 HOH HOH . G 5 HOH A 7 507 105 HOH HOH . G 5 HOH A 8 508 158 HOH HOH . G 5 HOH A 9 509 117 HOH HOH . G 5 HOH A 10 510 156 HOH HOH . G 5 HOH A 11 511 70 HOH HOH . G 5 HOH A 12 512 86 HOH HOH . G 5 HOH A 13 513 88 HOH HOH . G 5 HOH A 14 514 131 HOH HOH . G 5 HOH A 15 515 79 HOH HOH . G 5 HOH A 16 516 175 HOH HOH . G 5 HOH A 17 517 147 HOH HOH . G 5 HOH A 18 518 135 HOH HOH . G 5 HOH A 19 519 151 HOH HOH . G 5 HOH A 20 520 231 HOH HOH . G 5 HOH A 21 521 212 HOH HOH . G 5 HOH A 22 522 244 HOH HOH . G 5 HOH A 23 523 23 HOH HOH . G 5 HOH A 24 524 259 HOH HOH . G 5 HOH A 25 525 308 HOH HOH . G 5 HOH A 26 526 111 HOH HOH . G 5 HOH A 27 527 331 HOH HOH . G 5 HOH A 28 528 162 HOH HOH . G 5 HOH A 29 529 155 HOH HOH . G 5 HOH A 30 530 349 HOH HOH . G 5 HOH A 31 531 213 HOH HOH . G 5 HOH A 32 532 328 HOH HOH . G 5 HOH A 33 533 2 HOH HOH . G 5 HOH A 34 534 4 HOH HOH . G 5 HOH A 35 535 9 HOH HOH . G 5 HOH A 36 536 10 HOH HOH . G 5 HOH A 37 537 11 HOH HOH . G 5 HOH A 38 538 19 HOH HOH . G 5 HOH A 39 539 20 HOH HOH . G 5 HOH A 40 540 22 HOH HOH . G 5 HOH A 41 541 24 HOH HOH . G 5 HOH A 42 542 28 HOH HOH . G 5 HOH A 43 543 34 HOH HOH . G 5 HOH A 44 544 37 HOH HOH . G 5 HOH A 45 545 45 HOH HOH . G 5 HOH A 46 546 51 HOH HOH . G 5 HOH A 47 547 61 HOH HOH . G 5 HOH A 48 548 62 HOH HOH . G 5 HOH A 49 549 63 HOH HOH . G 5 HOH A 50 550 66 HOH HOH . G 5 HOH A 51 551 68 HOH HOH . G 5 HOH A 52 552 72 HOH HOH . G 5 HOH A 53 553 74 HOH HOH . G 5 HOH A 54 554 82 HOH HOH . G 5 HOH A 55 555 90 HOH HOH . G 5 HOH A 56 556 93 HOH HOH . G 5 HOH A 57 557 98 HOH HOH . G 5 HOH A 58 558 120 HOH HOH . G 5 HOH A 59 559 122 HOH HOH . G 5 HOH A 60 560 129 HOH HOH . G 5 HOH A 61 561 132 HOH HOH . G 5 HOH A 62 562 133 HOH HOH . G 5 HOH A 63 563 144 HOH HOH . G 5 HOH A 64 564 146 HOH HOH . G 5 HOH A 65 565 149 HOH HOH . G 5 HOH A 66 566 154 HOH HOH . G 5 HOH A 67 567 166 HOH HOH . G 5 HOH A 68 568 173 HOH HOH . G 5 HOH A 69 569 178 HOH HOH . G 5 HOH A 70 570 183 HOH HOH . G 5 HOH A 71 571 189 HOH HOH . G 5 HOH A 72 572 190 HOH HOH . G 5 HOH A 73 573 191 HOH HOH . G 5 HOH A 74 574 195 HOH HOH . G 5 HOH A 75 575 202 HOH HOH . G 5 HOH A 76 576 211 HOH HOH . G 5 HOH A 77 577 214 HOH HOH . G 5 HOH A 78 578 219 HOH HOH . G 5 HOH A 79 579 226 HOH HOH . G 5 HOH A 80 580 228 HOH HOH . G 5 HOH A 81 581 233 HOH HOH . G 5 HOH A 82 582 236 HOH HOH . G 5 HOH A 83 583 242 HOH HOH . G 5 HOH A 84 584 249 HOH HOH . G 5 HOH A 85 585 256 HOH HOH . G 5 HOH A 86 586 258 HOH HOH . G 5 HOH A 87 587 270 HOH HOH . G 5 HOH A 88 588 295 HOH HOH . G 5 HOH A 89 589 296 HOH HOH . G 5 HOH A 90 590 318 HOH HOH . G 5 HOH A 91 591 320 HOH HOH . G 5 HOH A 92 592 323 HOH HOH . G 5 HOH A 93 593 325 HOH HOH . G 5 HOH A 94 594 326 HOH HOH . G 5 HOH A 95 595 330 HOH HOH . G 5 HOH A 96 596 334 HOH HOH . G 5 HOH A 97 597 337 HOH HOH . H 5 HOH B 1 501 157 HOH HOH . H 5 HOH B 2 502 335 HOH HOH . H 5 HOH B 3 503 40 HOH HOH . H 5 HOH B 4 504 230 HOH HOH . H 5 HOH B 5 505 16 HOH HOH . H 5 HOH B 6 506 167 HOH HOH . H 5 HOH B 7 507 241 HOH HOH . H 5 HOH B 8 508 100 HOH HOH . H 5 HOH B 9 509 145 HOH HOH . H 5 HOH B 10 510 118 HOH HOH . H 5 HOH B 11 511 124 HOH HOH . H 5 HOH B 12 512 65 HOH HOH . H 5 HOH B 13 513 185 HOH HOH . H 5 HOH B 14 514 55 HOH HOH . H 5 HOH B 15 515 56 HOH HOH . H 5 HOH B 16 516 52 HOH HOH . H 5 HOH B 17 517 89 HOH HOH . H 5 HOH B 18 518 42 HOH HOH . H 5 HOH B 19 519 101 HOH HOH . H 5 HOH B 20 520 153 HOH HOH . H 5 HOH B 21 521 138 HOH HOH . H 5 HOH B 22 522 114 HOH HOH . H 5 HOH B 23 523 29 HOH HOH . H 5 HOH B 24 524 206 HOH HOH . H 5 HOH B 25 525 71 HOH HOH . H 5 HOH B 26 526 58 HOH HOH . H 5 HOH B 27 527 57 HOH HOH . H 5 HOH B 28 528 104 HOH HOH . H 5 HOH B 29 529 18 HOH HOH . H 5 HOH B 30 530 103 HOH HOH . H 5 HOH B 31 531 15 HOH HOH . H 5 HOH B 32 532 41 HOH HOH . H 5 HOH B 33 533 128 HOH HOH . H 5 HOH B 34 534 78 HOH HOH . H 5 HOH B 35 535 298 HOH HOH . H 5 HOH B 36 536 152 HOH HOH . H 5 HOH B 37 537 14 HOH HOH . H 5 HOH B 38 538 305 HOH HOH . H 5 HOH B 39 539 282 HOH HOH . H 5 HOH B 40 540 316 HOH HOH . H 5 HOH B 41 541 137 HOH HOH . H 5 HOH B 42 542 170 HOH HOH . H 5 HOH B 43 543 344 HOH HOH . H 5 HOH B 44 544 163 HOH HOH . H 5 HOH B 45 545 317 HOH HOH . H 5 HOH B 46 546 223 HOH HOH . H 5 HOH B 47 547 251 HOH HOH . H 5 HOH B 48 548 85 HOH HOH . H 5 HOH B 49 549 179 HOH HOH . H 5 HOH B 50 550 281 HOH HOH . H 5 HOH B 51 551 301 HOH HOH . H 5 HOH B 52 552 347 HOH HOH . H 5 HOH B 53 553 204 HOH HOH . H 5 HOH B 54 554 266 HOH HOH . H 5 HOH B 55 555 197 HOH HOH . H 5 HOH B 56 556 262 HOH HOH . H 5 HOH B 57 557 59 HOH HOH . H 5 HOH B 58 558 113 HOH HOH . H 5 HOH B 59 559 196 HOH HOH . H 5 HOH B 60 560 1 HOH HOH . H 5 HOH B 61 561 3 HOH HOH . H 5 HOH B 62 562 5 HOH HOH . H 5 HOH B 63 563 6 HOH HOH . H 5 HOH B 64 564 7 HOH HOH . H 5 HOH B 65 565 8 HOH HOH . H 5 HOH B 66 566 13 HOH HOH . H 5 HOH B 67 567 17 HOH HOH . H 5 HOH B 68 568 21 HOH HOH . H 5 HOH B 69 569 25 HOH HOH . H 5 HOH B 70 570 26 HOH HOH . H 5 HOH B 71 571 27 HOH HOH . H 5 HOH B 72 572 30 HOH HOH . H 5 HOH B 73 573 31 HOH HOH . H 5 HOH B 74 574 32 HOH HOH . H 5 HOH B 75 575 33 HOH HOH . H 5 HOH B 76 576 35 HOH HOH . H 5 HOH B 77 577 36 HOH HOH . H 5 HOH B 78 578 38 HOH HOH . H 5 HOH B 79 579 39 HOH HOH . H 5 HOH B 80 580 43 HOH HOH . H 5 HOH B 81 581 44 HOH HOH . H 5 HOH B 82 582 46 HOH HOH . H 5 HOH B 83 583 47 HOH HOH . H 5 HOH B 84 584 48 HOH HOH . H 5 HOH B 85 585 49 HOH HOH . H 5 HOH B 86 586 53 HOH HOH . H 5 HOH B 87 587 54 HOH HOH . H 5 HOH B 88 588 64 HOH HOH . H 5 HOH B 89 589 67 HOH HOH . H 5 HOH B 90 590 69 HOH HOH . H 5 HOH B 91 591 73 HOH HOH . H 5 HOH B 92 592 75 HOH HOH . H 5 HOH B 93 593 76 HOH HOH . H 5 HOH B 94 594 77 HOH HOH . H 5 HOH B 95 595 83 HOH HOH . H 5 HOH B 96 596 84 HOH HOH . H 5 HOH B 97 597 87 HOH HOH . H 5 HOH B 98 598 92 HOH HOH . H 5 HOH B 99 599 94 HOH HOH . H 5 HOH B 100 600 96 HOH HOH . H 5 HOH B 101 601 106 HOH HOH . H 5 HOH B 102 602 107 HOH HOH . H 5 HOH B 103 603 108 HOH HOH . H 5 HOH B 104 604 109 HOH HOH . H 5 HOH B 105 605 110 HOH HOH . H 5 HOH B 106 606 116 HOH HOH . H 5 HOH B 107 607 121 HOH HOH . H 5 HOH B 108 608 123 HOH HOH . H 5 HOH B 109 609 125 HOH HOH . H 5 HOH B 110 610 127 HOH HOH . H 5 HOH B 111 611 130 HOH HOH . H 5 HOH B 112 612 136 HOH HOH . H 5 HOH B 113 613 141 HOH HOH . H 5 HOH B 114 614 142 HOH HOH . H 5 HOH B 115 615 143 HOH HOH . H 5 HOH B 116 616 148 HOH HOH . H 5 HOH B 117 617 150 HOH HOH . H 5 HOH B 118 618 159 HOH HOH . H 5 HOH B 119 619 160 HOH HOH . H 5 HOH B 120 620 165 HOH HOH . H 5 HOH B 121 621 171 HOH HOH . H 5 HOH B 122 622 172 HOH HOH . H 5 HOH B 123 623 174 HOH HOH . H 5 HOH B 124 624 181 HOH HOH . H 5 HOH B 125 625 198 HOH HOH . H 5 HOH B 126 626 199 HOH HOH . H 5 HOH B 127 627 203 HOH HOH . H 5 HOH B 128 628 207 HOH HOH . H 5 HOH B 129 629 216 HOH HOH . H 5 HOH B 130 630 217 HOH HOH . H 5 HOH B 131 631 220 HOH HOH . H 5 HOH B 132 632 221 HOH HOH . H 5 HOH B 133 633 224 HOH HOH . H 5 HOH B 134 634 229 HOH HOH . H 5 HOH B 135 635 235 HOH HOH . H 5 HOH B 136 636 237 HOH HOH . H 5 HOH B 137 637 238 HOH HOH . H 5 HOH B 138 638 240 HOH HOH . H 5 HOH B 139 639 243 HOH HOH . H 5 HOH B 140 640 245 HOH HOH . H 5 HOH B 141 641 246 HOH HOH . H 5 HOH B 142 642 248 HOH HOH . H 5 HOH B 143 643 257 HOH HOH . H 5 HOH B 144 644 260 HOH HOH . H 5 HOH B 145 645 263 HOH HOH . H 5 HOH B 146 646 264 HOH HOH . H 5 HOH B 147 647 271 HOH HOH . H 5 HOH B 148 648 275 HOH HOH . H 5 HOH B 149 649 276 HOH HOH . H 5 HOH B 150 650 277 HOH HOH . H 5 HOH B 151 651 284 HOH HOH . H 5 HOH B 152 652 285 HOH HOH . H 5 HOH B 153 653 287 HOH HOH . H 5 HOH B 154 654 288 HOH HOH . H 5 HOH B 155 655 289 HOH HOH . H 5 HOH B 156 656 292 HOH HOH . H 5 HOH B 157 657 302 HOH HOH . H 5 HOH B 158 658 306 HOH HOH . H 5 HOH B 159 659 307 HOH HOH . H 5 HOH B 160 660 310 HOH HOH . H 5 HOH B 161 661 312 HOH HOH . H 5 HOH B 162 662 321 HOH HOH . H 5 HOH B 163 663 322 HOH HOH . H 5 HOH B 164 664 327 HOH HOH . H 5 HOH B 165 665 332 HOH HOH . H 5 HOH B 166 666 333 HOH HOH . H 5 HOH B 167 667 338 HOH HOH . H 5 HOH B 168 668 342 HOH HOH . H 5 HOH B 169 669 343 HOH HOH . H 5 HOH B 170 670 346 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . D 3 6.916 -6.124 20.162 1 44.74 ? N1 EPE 402 A 1 HETATM 2 C C2 EPE . . . D 3 7.116 -7.046 21.293 1 40.33 ? C2 EPE 402 A 1 HETATM 3 C C3 EPE . . . D 3 5.806 -7.475 21.944 1 40.75 ? C3 EPE 402 A 1 HETATM 4 N N4 EPE . . . D 3 4.967 -6.335 22.247 1 43.46 ? N4 EPE 402 A 1 HETATM 5 C C5 EPE . . . D 3 5.435 -5.013 21.881 1 38.97 ? C5 EPE 402 A 1 HETATM 6 C C6 EPE . . . D 3 6.002 -4.994 20.464 1 37.38 ? C6 EPE 402 A 1 HETATM 7 C C7 EPE . . . D 3 3.705 -6.526 22.937 1 52.07 ? C7 EPE 402 A 1 HETATM 8 C C8 EPE . . . D 3 3.444 -5.414 23.94 1 59.07 ? C8 EPE 402 A 1 HETATM 9 O O8 EPE . . . D 3 2.345 -5.784 24.735 1 71.66 ? O8 EPE 402 A 1 HETATM 10 C C9 EPE . . . D 3 8.199 -5.573 19.694 1 43.75 ? C9 EPE 402 A 1 HETATM 11 C C10 EPE . . . D 3 9.169 -6.636 19.204 1 45.59 ? C10 EPE 402 A 1 HETATM 12 S S EPE . . . D 3 10.127 -6.111 17.755 1 42.24 ? S EPE 402 A 1 HETATM 13 O O1S EPE . . . D 3 10.199 -7.213 16.815 1 37.75 ? O1S EPE 402 A 1 HETATM 14 O O2S EPE . . . D 3 9.385 -5.002 17.144 1 57.19 ? O2S EPE 402 A 1 HETATM 15 O O3S EPE . . . D 3 11.456 -5.629 18.063 1 40.38 ? O3S EPE 402 A 1 # _model_server_stats.io_time_ms 115 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #