data_4X1P
#
_model_server_result.job_id            BiK84Dd6M244kXvmI-bGfQ 
_model_server_result.datetime_utc      '2024-10-15 13:22:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4x1p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":100}' 
#
_entry.id    4X1P 
#
_exptl.entry_id    4X1P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              127.188 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            piperidine-1-carboximidamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4X1P 
_cell.length_a            121.082 
_cell.length_b            121.082 
_cell.length_c            43.242 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4X1P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf6 B SG CYS 1 P CYS 1 1_555 B SG CYS 10 P CYS 10 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf7 B SG CYS 1 P CYS 1 1_555 B SG CYS 10 P CYS 10 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.054 ? 
covale ? covale1 B C SER 5 P SER 5 1_555 B N DAL 6 P DAL 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.533 ? 
covale ? covale2 B CB DAL 6 P DAL 6 1_555 G C2 MRZ . P MRZ 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.515 ? 
covale ? covale3 B C DAL 6 P DAL 6 1_555 B N TYR 7 P TYR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.569 ? 
#
_chem_comp.formula           'C6 H13 N3' 
_chem_comp.formula_weight    127.188 
_chem_comp.id                MRZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              piperidine-1-carboximidamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4X1P 
_atom_sites.fract_transf_matrix[1][1]    0.008259 
_atom_sites.fract_transf_matrix[1][2]    0.004768 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009537 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023126 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 U 1 301 301 SO4 SO4 . 
D 3 SO4 U 1 302 302 SO4 SO4 . 
E 4 PGE U 1 303 303 PGE PGE . 
F 4 PGE U 1 304 304 PGE PGE . 
G 5 MRZ P 1 100 100 MRZ MRZ . 
H 6 HOH U 1 401 401 HOH HOH . 
H 6 HOH U 2 402 555 HOH HOH . 
H 6 HOH U 3 403 560 HOH HOH . 
H 6 HOH U 4 404 402 HOH HOH . 
H 6 HOH U 5 405 403 HOH HOH . 
H 6 HOH U 6 406 404 HOH HOH . 
H 6 HOH U 7 407 405 HOH HOH . 
H 6 HOH U 8 408 535 HOH HOH . 
H 6 HOH U 9 409 554 HOH HOH . 
H 6 HOH U 10 410 406 HOH HOH . 
H 6 HOH U 11 411 407 HOH HOH . 
H 6 HOH U 12 412 408 HOH HOH . 
H 6 HOH U 13 413 494 HOH HOH . 
H 6 HOH U 14 414 569 HOH HOH . 
H 6 HOH U 15 415 409 HOH HOH . 
H 6 HOH U 16 416 493 HOH HOH . 
H 6 HOH U 17 417 544 HOH HOH . 
H 6 HOH U 18 418 410 HOH HOH . 
H 6 HOH U 19 419 507 HOH HOH . 
H 6 HOH U 20 420 411 HOH HOH . 
H 6 HOH U 21 421 412 HOH HOH . 
H 6 HOH U 22 422 545 HOH HOH . 
H 6 HOH U 23 423 529 HOH HOH . 
H 6 HOH U 24 424 413 HOH HOH . 
H 6 HOH U 25 425 414 HOH HOH . 
H 6 HOH U 26 426 542 HOH HOH . 
H 6 HOH U 27 427 415 HOH HOH . 
H 6 HOH U 28 428 546 HOH HOH . 
H 6 HOH U 29 429 416 HOH HOH . 
H 6 HOH U 30 430 417 HOH HOH . 
H 6 HOH U 31 431 563 HOH HOH . 
H 6 HOH U 32 432 536 HOH HOH . 
H 6 HOH U 33 433 556 HOH HOH . 
H 6 HOH U 34 434 524 HOH HOH . 
H 6 HOH U 35 435 491 HOH HOH . 
H 6 HOH U 36 436 497 HOH HOH . 
H 6 HOH U 37 437 541 HOH HOH . 
H 6 HOH U 38 438 418 HOH HOH . 
H 6 HOH U 39 439 540 HOH HOH . 
H 6 HOH U 40 440 419 HOH HOH . 
H 6 HOH U 41 441 420 HOH HOH . 
H 6 HOH U 42 442 531 HOH HOH . 
H 6 HOH U 43 443 512 HOH HOH . 
H 6 HOH U 44 444 489 HOH HOH . 
H 6 HOH U 45 445 498 HOH HOH . 
H 6 HOH U 46 446 523 HOH HOH . 
H 6 HOH U 47 447 421 HOH HOH . 
H 6 HOH U 48 448 422 HOH HOH . 
H 6 HOH U 49 449 423 HOH HOH . 
H 6 HOH U 50 450 532 HOH HOH . 
H 6 HOH U 51 451 492 HOH HOH . 
H 6 HOH U 52 452 499 HOH HOH . 
H 6 HOH U 53 453 424 HOH HOH . 
H 6 HOH U 54 454 425 HOH HOH . 
H 6 HOH U 55 455 426 HOH HOH . 
H 6 HOH U 56 456 427 HOH HOH . 
H 6 HOH U 57 457 534 HOH HOH . 
H 6 HOH U 58 458 428 HOH HOH . 
H 6 HOH U 59 459 547 HOH HOH . 
H 6 HOH U 60 460 429 HOH HOH . 
H 6 HOH U 61 461 430 HOH HOH . 
H 6 HOH U 62 462 431 HOH HOH . 
H 6 HOH U 63 463 487 HOH HOH . 
H 6 HOH U 64 464 432 HOH HOH . 
H 6 HOH U 65 465 565 HOH HOH . 
H 6 HOH U 66 466 433 HOH HOH . 
H 6 HOH U 67 467 528 HOH HOH . 
H 6 HOH U 68 468 501 HOH HOH . 
H 6 HOH U 69 469 434 HOH HOH . 
H 6 HOH U 70 470 435 HOH HOH . 
H 6 HOH U 71 471 436 HOH HOH . 
H 6 HOH U 72 472 488 HOH HOH . 
H 6 HOH U 73 473 437 HOH HOH . 
H 6 HOH U 74 474 561 HOH HOH . 
H 6 HOH U 75 475 438 HOH HOH . 
H 6 HOH U 76 476 439 HOH HOH . 
H 6 HOH U 77 477 440 HOH HOH . 
H 6 HOH U 78 478 441 HOH HOH . 
H 6 HOH U 79 479 442 HOH HOH . 
H 6 HOH U 80 480 443 HOH HOH . 
H 6 HOH U 81 481 490 HOH HOH . 
H 6 HOH U 82 482 444 HOH HOH . 
H 6 HOH U 83 483 445 HOH HOH . 
H 6 HOH U 84 484 506 HOH HOH . 
H 6 HOH U 85 485 500 HOH HOH . 
H 6 HOH U 86 486 505 HOH HOH . 
H 6 HOH U 87 487 567 HOH HOH . 
H 6 HOH U 88 488 515 HOH HOH . 
H 6 HOH U 89 489 446 HOH HOH . 
H 6 HOH U 90 490 447 HOH HOH . 
H 6 HOH U 91 491 511 HOH HOH . 
H 6 HOH U 92 492 448 HOH HOH . 
H 6 HOH U 93 493 449 HOH HOH . 
H 6 HOH U 94 494 450 HOH HOH . 
H 6 HOH U 95 495 521 HOH HOH . 
H 6 HOH U 96 496 537 HOH HOH . 
H 6 HOH U 97 497 451 HOH HOH . 
H 6 HOH U 98 498 530 HOH HOH . 
H 6 HOH U 99 499 566 HOH HOH . 
H 6 HOH U 100 500 522 HOH HOH . 
H 6 HOH U 101 501 502 HOH HOH . 
H 6 HOH U 102 502 452 HOH HOH . 
H 6 HOH U 103 503 496 HOH HOH . 
H 6 HOH U 104 504 453 HOH HOH . 
H 6 HOH U 105 505 454 HOH HOH . 
H 6 HOH U 106 506 455 HOH HOH . 
H 6 HOH U 107 507 456 HOH HOH . 
H 6 HOH U 108 508 513 HOH HOH . 
H 6 HOH U 109 509 526 HOH HOH . 
H 6 HOH U 110 510 543 HOH HOH . 
H 6 HOH U 111 511 504 HOH HOH . 
H 6 HOH U 112 512 508 HOH HOH . 
H 6 HOH U 113 513 533 HOH HOH . 
H 6 HOH U 114 514 457 HOH HOH . 
H 6 HOH U 115 515 510 HOH HOH . 
H 6 HOH U 116 516 458 HOH HOH . 
H 6 HOH U 117 517 495 HOH HOH . 
H 6 HOH U 118 518 552 HOH HOH . 
H 6 HOH U 119 519 564 HOH HOH . 
H 6 HOH U 120 520 459 HOH HOH . 
H 6 HOH U 121 521 568 HOH HOH . 
H 6 HOH U 122 522 516 HOH HOH . 
H 6 HOH U 123 523 460 HOH HOH . 
H 6 HOH U 124 524 503 HOH HOH . 
H 6 HOH U 125 525 461 HOH HOH . 
H 6 HOH U 126 526 527 HOH HOH . 
H 6 HOH U 127 527 462 HOH HOH . 
H 6 HOH U 128 528 550 HOH HOH . 
H 6 HOH U 129 529 463 HOH HOH . 
H 6 HOH U 130 530 514 HOH HOH . 
H 6 HOH U 131 531 464 HOH HOH . 
H 6 HOH U 132 532 557 HOH HOH . 
H 6 HOH U 133 533 465 HOH HOH . 
H 6 HOH U 134 534 525 HOH HOH . 
H 6 HOH U 135 535 519 HOH HOH . 
H 6 HOH U 136 536 517 HOH HOH . 
H 6 HOH U 137 537 551 HOH HOH . 
H 6 HOH U 138 538 466 HOH HOH . 
H 6 HOH U 139 539 467 HOH HOH . 
H 6 HOH U 140 540 468 HOH HOH . 
H 6 HOH U 141 541 469 HOH HOH . 
H 6 HOH U 142 542 538 HOH HOH . 
H 6 HOH U 143 543 470 HOH HOH . 
H 6 HOH U 144 544 471 HOH HOH . 
H 6 HOH U 145 545 549 HOH HOH . 
H 6 HOH U 146 546 518 HOH HOH . 
H 6 HOH U 147 547 472 HOH HOH . 
H 6 HOH U 148 548 473 HOH HOH . 
H 6 HOH U 149 549 474 HOH HOH . 
H 6 HOH U 150 550 558 HOH HOH . 
H 6 HOH U 151 551 475 HOH HOH . 
H 6 HOH U 152 552 539 HOH HOH . 
H 6 HOH U 153 553 476 HOH HOH . 
H 6 HOH U 154 554 477 HOH HOH . 
H 6 HOH U 155 555 478 HOH HOH . 
H 6 HOH U 156 556 548 HOH HOH . 
H 6 HOH U 157 557 553 HOH HOH . 
H 6 HOH U 158 558 479 HOH HOH . 
H 6 HOH U 159 559 509 HOH HOH . 
H 6 HOH U 160 560 480 HOH HOH . 
H 6 HOH U 161 561 559 HOH HOH . 
H 6 HOH U 162 562 481 HOH HOH . 
H 6 HOH U 163 563 482 HOH HOH . 
H 6 HOH U 164 564 483 HOH HOH . 
H 6 HOH U 165 565 484 HOH HOH . 
H 6 HOH U 166 566 485 HOH HOH . 
H 6 HOH U 167 567 562 HOH HOH . 
H 6 HOH U 168 568 486 HOH HOH . 
H 6 HOH U 169 569 520 HOH HOH . 
I 6 HOH P 1 201 102 HOH HOH . 
I 6 HOH P 2 202 101 HOH HOH . 
I 6 HOH P 3 203 103 HOH HOH . 
I 6 HOH P 4 204 105 HOH HOH . 
I 6 HOH P 5 205 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MRZ . . . G 5 29.323 15.785 -10.424 1 18.99 ? C1 MRZ 100 P 1 
HETATM 2 C C6 MRZ . . . G 5 29.99 16.687 -9.383 1 18.31 ? C6 MRZ 100 P 1 
HETATM 3 C C5 MRZ . . . G 5 31.484 16.843 -9.499 1 17.15 ? C5 MRZ 100 P 1 
HETATM 4 N N4 MRZ . . . G 5 31.906 17.003 -10.902 1 16.35 ? N4 MRZ 100 P 1 
HETATM 5 C C3 MRZ . . . G 5 31.249 16.517 -12.126 1 17.78 ? C3 MRZ 100 P 1 
HETATM 6 C C2 MRZ . . . G 5 29.988 15.796 -11.786 1 22.45 ? C2 MRZ 100 P 1 
HETATM 7 C C7 MRZ . . . G 5 33.204 17.541 -11.161 1 15.79 ? C7 MRZ 100 P 1 
HETATM 8 N N8 MRZ . . . G 5 34.1 17.579 -10.074 1 14.5 ? N8 MRZ 100 P 1 
HETATM 9 N N9 MRZ . . . G 5 33.794 17.594 -12.445 1 16.14 ? N9 MRZ 100 P 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#