data_4X1S
#
_model_server_result.job_id            d2KplZtpPxMMLgwRA3OYjw 
_model_server_result.datetime_utc      '2024-10-16 20:56:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4x1s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":100}' 
#
_entry.id    4X1S 
#
_exptl.entry_id    4X1S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              127.188 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            piperidine-1-carboximidamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4X1S 
_cell.length_a            121.3 
_cell.length_b            121.3 
_cell.length_c            42.926 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4X1S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 1 P CYS 1 1_555 A SG CYS 10 P CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
disulf ? disulf2 B SG CYS 31 U CYS 42 1_555 B SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 B SG CYS 39 U CYS 50 1_555 B SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 B SG CYS 135 U CYS 136 1_555 B SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf5 B SG CYS 167 U CYS 168 1_555 B SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf6 B SG CYS 194 U CYS 191 1_555 B SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
covale ? covale1 A CB ALA 6 P ALA 6 1_555 C C1 MRZ . P MRZ 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.538 ? 
#
_chem_comp.formula           'C6 H13 N3' 
_chem_comp.formula_weight    127.188 
_chem_comp.id                MRZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              piperidine-1-carboximidamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C7 MRZ doub 237 n n 
C3 C2 MRZ sing 238 n n 
C3 N4 MRZ sing 239 n n 
C2 C1 MRZ sing 240 n n 
C7 N4 MRZ sing 241 n n 
C7 N8 MRZ sing 242 n n 
N4 C5 MRZ sing 243 n n 
C1 C6 MRZ sing 244 n n 
C5 C6 MRZ sing 245 n n 
C1 H1 MRZ sing 246 n n 
C1 H2 MRZ sing 247 n n 
C6 H3 MRZ sing 248 n n 
C6 H4 MRZ sing 249 n n 
C5 H5 MRZ sing 250 n n 
C5 H6 MRZ sing 251 n n 
C3 H7 MRZ sing 252 n n 
C3 H8 MRZ sing 253 n n 
C2 H9 MRZ sing 254 n n 
C2 H10 MRZ sing 255 n n 
N8 H11 MRZ sing 256 n n 
N8 H12 MRZ sing 257 n n 
N9 H13 MRZ sing 258 n n 
#
_atom_sites.entry_id                     4X1S 
_atom_sites.fract_transf_matrix[1][1]    0.008244 
_atom_sites.fract_transf_matrix[1][2]    0.00476 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009519 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023296 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MRZ P 1 100 100 MRZ MRZ . 
D 4 HOH P 1 201 201 HOH HOH . 
D 4 HOH P 2 202 202 HOH HOH . 
E 4 HOH U 1 301 301 HOH HOH . 
E 4 HOH U 2 302 360 HOH HOH . 
E 4 HOH U 3 303 354 HOH HOH . 
E 4 HOH U 4 304 302 HOH HOH . 
E 4 HOH U 5 305 355 HOH HOH . 
E 4 HOH U 6 306 327 HOH HOH . 
E 4 HOH U 7 307 344 HOH HOH . 
E 4 HOH U 8 308 303 HOH HOH . 
E 4 HOH U 9 309 304 HOH HOH . 
E 4 HOH U 10 310 305 HOH HOH . 
E 4 HOH U 11 311 362 HOH HOH . 
E 4 HOH U 12 312 331 HOH HOH . 
E 4 HOH U 13 313 328 HOH HOH . 
E 4 HOH U 14 314 306 HOH HOH . 
E 4 HOH U 15 315 342 HOH HOH . 
E 4 HOH U 16 316 307 HOH HOH . 
E 4 HOH U 17 317 308 HOH HOH . 
E 4 HOH U 18 318 309 HOH HOH . 
E 4 HOH U 19 319 338 HOH HOH . 
E 4 HOH U 20 320 340 HOH HOH . 
E 4 HOH U 21 321 310 HOH HOH . 
E 4 HOH U 22 322 363 HOH HOH . 
E 4 HOH U 23 323 311 HOH HOH . 
E 4 HOH U 24 324 336 HOH HOH . 
E 4 HOH U 25 325 345 HOH HOH . 
E 4 HOH U 26 326 349 HOH HOH . 
E 4 HOH U 27 327 312 HOH HOH . 
E 4 HOH U 28 328 346 HOH HOH . 
E 4 HOH U 29 329 313 HOH HOH . 
E 4 HOH U 30 330 329 HOH HOH . 
E 4 HOH U 31 331 350 HOH HOH . 
E 4 HOH U 32 332 364 HOH HOH . 
E 4 HOH U 33 333 314 HOH HOH . 
E 4 HOH U 34 334 330 HOH HOH . 
E 4 HOH U 35 335 359 HOH HOH . 
E 4 HOH U 36 336 343 HOH HOH . 
E 4 HOH U 37 337 333 HOH HOH . 
E 4 HOH U 38 338 315 HOH HOH . 
E 4 HOH U 39 339 348 HOH HOH . 
E 4 HOH U 40 340 352 HOH HOH . 
E 4 HOH U 41 341 316 HOH HOH . 
E 4 HOH U 42 342 361 HOH HOH . 
E 4 HOH U 43 343 317 HOH HOH . 
E 4 HOH U 44 344 341 HOH HOH . 
E 4 HOH U 45 345 365 HOH HOH . 
E 4 HOH U 46 346 318 HOH HOH . 
E 4 HOH U 47 347 334 HOH HOH . 
E 4 HOH U 48 348 319 HOH HOH . 
E 4 HOH U 49 349 332 HOH HOH . 
E 4 HOH U 50 350 357 HOH HOH . 
E 4 HOH U 51 351 320 HOH HOH . 
E 4 HOH U 52 352 321 HOH HOH . 
E 4 HOH U 53 353 322 HOH HOH . 
E 4 HOH U 54 354 323 HOH HOH . 
E 4 HOH U 55 355 324 HOH HOH . 
E 4 HOH U 56 356 335 HOH HOH . 
E 4 HOH U 57 357 339 HOH HOH . 
E 4 HOH U 58 358 351 HOH HOH . 
E 4 HOH U 59 359 356 HOH HOH . 
E 4 HOH U 60 360 325 HOH HOH . 
E 4 HOH U 61 361 337 HOH HOH . 
E 4 HOH U 62 362 326 HOH HOH . 
E 4 HOH U 63 363 353 HOH HOH . 
E 4 HOH U 64 364 347 HOH HOH . 
E 4 HOH U 65 365 358 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MRZ . . . C 3 -29.137 -17.318 -3.86 1 48.96 ? C1 MRZ 100 P 1 
HETATM 2 C C6 MRZ . . . C 3 -29.166 -18.184 -2.621 1 64.37 ? C6 MRZ 100 P 1 
HETATM 3 C C5 MRZ . . . C 3 -30.607 -18.495 -2.226 1 61.96 ? C5 MRZ 100 P 1 
HETATM 4 N N4 MRZ . . . C 3 -31.244 -19.18 -3.341 1 65 ? N4 MRZ 100 P 1 
HETATM 5 C C3 MRZ . . . C 3 -31.088 -18.633 -4.673 1 47.13 ? C3 MRZ 100 P 1 
HETATM 6 C C2 MRZ . . . C 3 -29.648 -18.257 -4.916 1 45.06 ? C2 MRZ 100 P 1 
HETATM 7 C C7 MRZ . . . C 3 -31.996 -20.242 -3.132 1 57.12 ? C7 MRZ 100 P 1 
HETATM 8 N N8 MRZ . . . C 3 -32.217 -20.763 -1.871 1 69.58 ? N8 MRZ 100 P 1 
HETATM 9 N N9 MRZ . . . C 3 -32.57 -20.832 -4.044 1 64.33 ? N9 MRZ 100 P 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#