data_4X1U # _model_server_result.job_id eVIGuTfeo32dJcG-OhaJqQ _model_server_result.datetime_utc '2025-09-07 15:23:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x1u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4X1U # _exptl.entry_id 4X1U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X1U _cell.length_a 147.994 _cell.length_b 147.994 _cell.length_c 33.711 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X1U _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? Monomeric 1 author_defined_assembly 1 ? Monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 51 A ILE 44 1_555 A N CSO 52 A CSO 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSO 52 A CSO 45 1_555 A N GLN 53 A GLN 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale3 B C ILE 51 B ILE 44 1_555 B N CSO 52 B CSO 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale4 B C CSO 52 B CSO 45 1_555 B N GLN 53 B GLN 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 130 n n C1 C2 GOL sing 131 n n C1 H11 GOL sing 132 n n C1 H12 GOL sing 133 n n O1 HO1 GOL sing 134 n n C2 O2 GOL sing 135 n n C2 C3 GOL sing 136 n n C2 H2 GOL sing 137 n n O2 HO2 GOL sing 138 n n C3 O3 GOL sing 139 n n C3 H31 GOL sing 140 n n C3 H32 GOL sing 141 n n O3 HO3 GOL sing 142 n n # _atom_sites.entry_id 4X1U _atom_sites.fract_transf_matrix[1][1] 0.006757 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 3 GOL GOL . D 2 GOL A 1 202 5 GOL GOL . E 2 GOL B 1 201 1 GOL GOL . F 2 GOL B 1 202 2 GOL GOL . G 2 GOL B 1 203 4 GOL GOL . H 3 HOH A 1 301 176 HOH HOH . H 3 HOH A 2 302 187 HOH HOH . H 3 HOH A 3 303 62 HOH HOH . H 3 HOH A 4 304 76 HOH HOH . H 3 HOH A 5 305 14 HOH HOH . H 3 HOH A 6 306 150 HOH HOH . H 3 HOH A 7 307 30 HOH HOH . H 3 HOH A 8 308 61 HOH HOH . H 3 HOH A 9 309 218 HOH HOH . H 3 HOH A 10 310 25 HOH HOH . H 3 HOH A 11 311 146 HOH HOH . H 3 HOH A 12 312 22 HOH HOH . H 3 HOH A 13 313 124 HOH HOH . H 3 HOH A 14 314 21 HOH HOH . H 3 HOH A 15 315 235 HOH HOH . H 3 HOH A 16 316 227 HOH HOH . H 3 HOH A 17 317 192 HOH HOH . H 3 HOH A 18 318 23 HOH HOH . H 3 HOH A 19 319 149 HOH HOH . H 3 HOH A 20 320 74 HOH HOH . H 3 HOH A 21 321 4 HOH HOH . H 3 HOH A 22 322 168 HOH HOH . H 3 HOH A 23 323 59 HOH HOH . H 3 HOH A 24 324 205 HOH HOH . H 3 HOH A 25 325 172 HOH HOH . H 3 HOH A 26 326 99 HOH HOH . H 3 HOH A 27 327 37 HOH HOH . H 3 HOH A 28 328 84 HOH HOH . H 3 HOH A 29 329 200 HOH HOH . H 3 HOH A 30 330 161 HOH HOH . H 3 HOH A 31 331 19 HOH HOH . H 3 HOH A 32 332 64 HOH HOH . H 3 HOH A 33 333 158 HOH HOH . H 3 HOH A 34 334 52 HOH HOH . H 3 HOH A 35 335 49 HOH HOH . H 3 HOH A 36 336 7 HOH HOH . H 3 HOH A 37 337 193 HOH HOH . H 3 HOH A 38 338 174 HOH HOH . H 3 HOH A 39 339 65 HOH HOH . H 3 HOH A 40 340 35 HOH HOH . H 3 HOH A 41 341 72 HOH HOH . H 3 HOH A 42 342 24 HOH HOH . H 3 HOH A 43 343 16 HOH HOH . H 3 HOH A 44 344 60 HOH HOH . H 3 HOH A 45 345 48 HOH HOH . H 3 HOH A 46 346 215 HOH HOH . H 3 HOH A 47 347 44 HOH HOH . H 3 HOH A 48 348 122 HOH HOH . H 3 HOH A 49 349 237 HOH HOH . H 3 HOH A 50 350 157 HOH HOH . H 3 HOH A 51 351 41 HOH HOH . H 3 HOH A 52 352 221 HOH HOH . H 3 HOH A 53 353 15 HOH HOH . H 3 HOH A 54 354 1 HOH HOH . H 3 HOH A 55 355 2 HOH HOH . H 3 HOH A 56 356 3 HOH HOH . H 3 HOH A 57 357 5 HOH HOH . H 3 HOH A 58 358 6 HOH HOH . H 3 HOH A 59 359 8 HOH HOH . H 3 HOH A 60 360 9 HOH HOH . H 3 HOH A 61 361 10 HOH HOH . H 3 HOH A 62 362 11 HOH HOH . H 3 HOH A 63 363 12 HOH HOH . H 3 HOH A 64 364 13 HOH HOH . H 3 HOH A 65 365 17 HOH HOH . H 3 HOH A 66 366 18 HOH HOH . H 3 HOH A 67 367 20 HOH HOH . H 3 HOH A 68 368 26 HOH HOH . H 3 HOH A 69 369 27 HOH HOH . H 3 HOH A 70 370 28 HOH HOH . H 3 HOH A 71 371 29 HOH HOH . H 3 HOH A 72 372 31 HOH HOH . H 3 HOH A 73 373 32 HOH HOH . H 3 HOH A 74 374 33 HOH HOH . H 3 HOH A 75 375 34 HOH HOH . H 3 HOH A 76 376 38 HOH HOH . H 3 HOH A 77 377 39 HOH HOH . H 3 HOH A 78 378 40 HOH HOH . H 3 HOH A 79 379 42 HOH HOH . H 3 HOH A 80 380 43 HOH HOH . H 3 HOH A 81 381 47 HOH HOH . H 3 HOH A 82 382 50 HOH HOH . H 3 HOH A 83 383 51 HOH HOH . H 3 HOH A 84 384 53 HOH HOH . H 3 HOH A 85 385 54 HOH HOH . H 3 HOH A 86 386 55 HOH HOH . H 3 HOH A 87 387 56 HOH HOH . H 3 HOH A 88 388 57 HOH HOH . H 3 HOH A 89 389 58 HOH HOH . H 3 HOH A 90 390 63 HOH HOH . H 3 HOH A 91 391 66 HOH HOH . H 3 HOH A 92 392 67 HOH HOH . H 3 HOH A 93 393 68 HOH HOH . H 3 HOH A 94 394 69 HOH HOH . H 3 HOH A 95 395 70 HOH HOH . H 3 HOH A 96 396 73 HOH HOH . H 3 HOH A 97 397 107 HOH HOH . H 3 HOH A 98 398 141 HOH HOH . H 3 HOH A 99 399 162 HOH HOH . H 3 HOH A 100 400 163 HOH HOH . H 3 HOH A 101 401 169 HOH HOH . H 3 HOH A 102 402 171 HOH HOH . H 3 HOH A 103 403 181 HOH HOH . H 3 HOH A 104 404 186 HOH HOH . H 3 HOH A 105 405 194 HOH HOH . H 3 HOH A 106 406 199 HOH HOH . H 3 HOH A 107 407 201 HOH HOH . H 3 HOH A 108 408 211 HOH HOH . H 3 HOH A 109 409 216 HOH HOH . H 3 HOH A 110 410 219 HOH HOH . H 3 HOH A 111 411 220 HOH HOH . H 3 HOH A 112 412 231 HOH HOH . H 3 HOH A 113 413 232 HOH HOH . H 3 HOH A 114 414 233 HOH HOH . H 3 HOH A 115 415 236 HOH HOH . H 3 HOH A 116 416 238 HOH HOH . I 3 HOH B 1 301 185 HOH HOH . I 3 HOH B 2 302 170 HOH HOH . I 3 HOH B 3 303 36 HOH HOH . I 3 HOH B 4 304 133 HOH HOH . I 3 HOH B 5 305 209 HOH HOH . I 3 HOH B 6 306 140 HOH HOH . I 3 HOH B 7 307 80 HOH HOH . I 3 HOH B 8 308 135 HOH HOH . I 3 HOH B 9 309 183 HOH HOH . I 3 HOH B 10 310 142 HOH HOH . I 3 HOH B 11 311 103 HOH HOH . I 3 HOH B 12 312 81 HOH HOH . I 3 HOH B 13 313 167 HOH HOH . I 3 HOH B 14 314 188 HOH HOH . I 3 HOH B 15 315 120 HOH HOH . I 3 HOH B 16 316 93 HOH HOH . I 3 HOH B 17 317 113 HOH HOH . I 3 HOH B 18 318 207 HOH HOH . I 3 HOH B 19 319 189 HOH HOH . I 3 HOH B 20 320 222 HOH HOH . I 3 HOH B 21 321 110 HOH HOH . I 3 HOH B 22 322 224 HOH HOH . I 3 HOH B 23 323 137 HOH HOH . I 3 HOH B 24 324 87 HOH HOH . I 3 HOH B 25 325 85 HOH HOH . I 3 HOH B 26 326 197 HOH HOH . I 3 HOH B 27 327 106 HOH HOH . I 3 HOH B 28 328 184 HOH HOH . I 3 HOH B 29 329 119 HOH HOH . I 3 HOH B 30 330 108 HOH HOH . I 3 HOH B 31 331 202 HOH HOH . I 3 HOH B 32 332 125 HOH HOH . I 3 HOH B 33 333 228 HOH HOH . I 3 HOH B 34 334 92 HOH HOH . I 3 HOH B 35 335 160 HOH HOH . I 3 HOH B 36 336 139 HOH HOH . I 3 HOH B 37 337 159 HOH HOH . I 3 HOH B 38 338 46 HOH HOH . I 3 HOH B 39 339 45 HOH HOH . I 3 HOH B 40 340 127 HOH HOH . I 3 HOH B 41 341 177 HOH HOH . I 3 HOH B 42 342 71 HOH HOH . I 3 HOH B 43 343 210 HOH HOH . I 3 HOH B 44 344 75 HOH HOH . I 3 HOH B 45 345 164 HOH HOH . I 3 HOH B 46 346 230 HOH HOH . I 3 HOH B 47 347 166 HOH HOH . I 3 HOH B 48 348 182 HOH HOH . I 3 HOH B 49 349 225 HOH HOH . I 3 HOH B 50 350 155 HOH HOH . I 3 HOH B 51 351 94 HOH HOH . I 3 HOH B 52 352 173 HOH HOH . I 3 HOH B 53 353 179 HOH HOH . I 3 HOH B 54 354 196 HOH HOH . I 3 HOH B 55 355 136 HOH HOH . I 3 HOH B 56 356 77 HOH HOH . I 3 HOH B 57 357 78 HOH HOH . I 3 HOH B 58 358 79 HOH HOH . I 3 HOH B 59 359 82 HOH HOH . I 3 HOH B 60 360 83 HOH HOH . I 3 HOH B 61 361 86 HOH HOH . I 3 HOH B 62 362 88 HOH HOH . I 3 HOH B 63 363 89 HOH HOH . I 3 HOH B 64 364 90 HOH HOH . I 3 HOH B 65 365 91 HOH HOH . I 3 HOH B 66 366 95 HOH HOH . I 3 HOH B 67 367 96 HOH HOH . I 3 HOH B 68 368 97 HOH HOH . I 3 HOH B 69 369 98 HOH HOH . I 3 HOH B 70 370 100 HOH HOH . I 3 HOH B 71 371 101 HOH HOH . I 3 HOH B 72 372 102 HOH HOH . I 3 HOH B 73 373 104 HOH HOH . I 3 HOH B 74 374 105 HOH HOH . I 3 HOH B 75 375 109 HOH HOH . I 3 HOH B 76 376 111 HOH HOH . I 3 HOH B 77 377 112 HOH HOH . I 3 HOH B 78 378 114 HOH HOH . I 3 HOH B 79 379 115 HOH HOH . I 3 HOH B 80 380 116 HOH HOH . I 3 HOH B 81 381 117 HOH HOH . I 3 HOH B 82 382 118 HOH HOH . I 3 HOH B 83 383 121 HOH HOH . I 3 HOH B 84 384 123 HOH HOH . I 3 HOH B 85 385 126 HOH HOH . I 3 HOH B 86 386 128 HOH HOH . I 3 HOH B 87 387 129 HOH HOH . I 3 HOH B 88 388 130 HOH HOH . I 3 HOH B 89 389 131 HOH HOH . I 3 HOH B 90 390 132 HOH HOH . I 3 HOH B 91 391 134 HOH HOH . I 3 HOH B 92 392 138 HOH HOH . I 3 HOH B 93 393 143 HOH HOH . I 3 HOH B 94 394 144 HOH HOH . I 3 HOH B 95 395 145 HOH HOH . I 3 HOH B 96 396 147 HOH HOH . I 3 HOH B 97 397 148 HOH HOH . I 3 HOH B 98 398 151 HOH HOH . I 3 HOH B 99 399 152 HOH HOH . I 3 HOH B 100 400 153 HOH HOH . I 3 HOH B 101 401 154 HOH HOH . I 3 HOH B 102 402 156 HOH HOH . I 3 HOH B 103 403 165 HOH HOH . I 3 HOH B 104 404 175 HOH HOH . I 3 HOH B 105 405 178 HOH HOH . I 3 HOH B 106 406 180 HOH HOH . I 3 HOH B 107 407 190 HOH HOH . I 3 HOH B 108 408 191 HOH HOH . I 3 HOH B 109 409 195 HOH HOH . I 3 HOH B 110 410 198 HOH HOH . I 3 HOH B 111 411 203 HOH HOH . I 3 HOH B 112 412 204 HOH HOH . I 3 HOH B 113 413 206 HOH HOH . I 3 HOH B 114 414 208 HOH HOH . I 3 HOH B 115 415 212 HOH HOH . I 3 HOH B 116 416 213 HOH HOH . I 3 HOH B 117 417 214 HOH HOH . I 3 HOH B 118 418 217 HOH HOH . I 3 HOH B 119 419 223 HOH HOH . I 3 HOH B 120 420 226 HOH HOH . I 3 HOH B 121 421 229 HOH HOH . I 3 HOH B 122 422 234 HOH HOH . I 3 HOH B 123 423 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 44.922 30.629 29.386 1 45.74 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 43.519 31.013 29.39 1 37.4 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 45.263 29.407 30.26 1 49.05 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 44.928 28.199 29.548 1 40.77 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 46.737 29.344 30.729 1 48.25 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 47.116 27.983 31.162 1 44.49 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #