data_4X2F # _model_server_result.job_id PezjEnaIP9f2CQ7hDIaZJg _model_server_result.datetime_utc '2024-11-16 20:42:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4X2F # _exptl.entry_id 4X2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 253.259 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-amino-8-(4-aminophenyl)pyrido[2,3-d]pyrimidin-5(8H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X2F _cell.length_a 42.25 _cell.length_b 77.53 _cell.length_c 89.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H11 N5 O' _chem_comp.formula_weight 253.259 _chem_comp.id 3WJ _chem_comp.mon_nstd_flag . _chem_comp.name 4-amino-8-(4-aminophenyl)pyrido[2,3-d]pyrimidin-5(8H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N16 C12 3WJ doub 1 n y N16 C11 3WJ sing 2 n y C12 N6 3WJ sing 3 n y N17 C11 3WJ sing 4 n n C11 C5 3WJ doub 5 n y N6 C2 3WJ doub 6 n y C5 C2 3WJ sing 7 n y C5 C10 3WJ sing 8 n n C2 N1 3WJ sing 9 n n O15 C10 3WJ doub 10 n n C10 C9 3WJ sing 11 n n N1 C3 3WJ sing 12 n n N1 C4 3WJ sing 13 n n C3 C8 3WJ doub 14 n y C3 C7 3WJ sing 15 n y C8 C14 3WJ sing 16 n y C7 C13 3WJ doub 17 n y C14 C18 3WJ doub 18 n y C9 C4 3WJ doub 19 n n C13 C18 3WJ sing 20 n y C18 N19 3WJ sing 21 n n C7 H1 3WJ sing 22 n n C8 H2 3WJ sing 23 n n C9 H3 3WJ sing 24 n n C12 H4 3WJ sing 25 n n C13 H5 3WJ sing 26 n n C14 H6 3WJ sing 27 n n C4 H7 3WJ sing 28 n n N17 H8 3WJ sing 29 n n N17 H9 3WJ sing 30 n n N19 H10 3WJ sing 31 n n N19 H11 3WJ sing 32 n n # _atom_sites.entry_id 4X2F _atom_sites.fract_transf_matrix[1][1] 0.023669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3WJ A 1 601 1 3WJ INH . C 3 SO4 A 1 602 1 SO4 SO4 . D 4 HOH A 1 701 120 HOH HOH . D 4 HOH A 2 702 64 HOH HOH . D 4 HOH A 3 703 68 HOH HOH . D 4 HOH A 4 704 130 HOH HOH . D 4 HOH A 5 705 141 HOH HOH . D 4 HOH A 6 706 203 HOH HOH . D 4 HOH A 7 707 161 HOH HOH . D 4 HOH A 8 708 32 HOH HOH . D 4 HOH A 9 709 146 HOH HOH . D 4 HOH A 10 710 56 HOH HOH . D 4 HOH A 11 711 1 HOH HOH . D 4 HOH A 12 712 122 HOH HOH . D 4 HOH A 13 713 96 HOH HOH . D 4 HOH A 14 714 75 HOH HOH . D 4 HOH A 15 715 73 HOH HOH . D 4 HOH A 16 716 97 HOH HOH . D 4 HOH A 17 717 34 HOH HOH . D 4 HOH A 18 718 167 HOH HOH . D 4 HOH A 19 719 30 HOH HOH . D 4 HOH A 20 720 160 HOH HOH . D 4 HOH A 21 721 145 HOH HOH . D 4 HOH A 22 722 54 HOH HOH . D 4 HOH A 23 723 225 HOH HOH . D 4 HOH A 24 724 83 HOH HOH . D 4 HOH A 25 725 113 HOH HOH . D 4 HOH A 26 726 95 HOH HOH . D 4 HOH A 27 727 221 HOH HOH . D 4 HOH A 28 728 194 HOH HOH . D 4 HOH A 29 729 201 HOH HOH . D 4 HOH A 30 730 148 HOH HOH . D 4 HOH A 31 731 155 HOH HOH . D 4 HOH A 32 732 169 HOH HOH . D 4 HOH A 33 733 125 HOH HOH . D 4 HOH A 34 734 115 HOH HOH . D 4 HOH A 35 735 199 HOH HOH . D 4 HOH A 36 736 209 HOH HOH . D 4 HOH A 37 737 9 HOH HOH . D 4 HOH A 38 738 67 HOH HOH . D 4 HOH A 39 739 69 HOH HOH . D 4 HOH A 40 740 190 HOH HOH . D 4 HOH A 41 741 21 HOH HOH . D 4 HOH A 42 742 82 HOH HOH . D 4 HOH A 43 743 17 HOH HOH . D 4 HOH A 44 744 179 HOH HOH . D 4 HOH A 45 745 165 HOH HOH . D 4 HOH A 46 746 187 HOH HOH . D 4 HOH A 47 747 135 HOH HOH . D 4 HOH A 48 748 105 HOH HOH . D 4 HOH A 49 749 183 HOH HOH . D 4 HOH A 50 750 78 HOH HOH . D 4 HOH A 51 751 196 HOH HOH . D 4 HOH A 52 752 107 HOH HOH . D 4 HOH A 53 753 175 HOH HOH . D 4 HOH A 54 754 181 HOH HOH . D 4 HOH A 55 755 214 HOH HOH . D 4 HOH A 56 756 126 HOH HOH . D 4 HOH A 57 757 53 HOH HOH . D 4 HOH A 58 758 35 HOH HOH . D 4 HOH A 59 759 102 HOH HOH . D 4 HOH A 60 760 137 HOH HOH . D 4 HOH A 61 761 3 HOH HOH . D 4 HOH A 62 762 116 HOH HOH . D 4 HOH A 63 763 223 HOH HOH . D 4 HOH A 64 764 76 HOH HOH . D 4 HOH A 65 765 200 HOH HOH . D 4 HOH A 66 766 13 HOH HOH . D 4 HOH A 67 767 88 HOH HOH . D 4 HOH A 68 768 185 HOH HOH . D 4 HOH A 69 769 47 HOH HOH . D 4 HOH A 70 770 31 HOH HOH . D 4 HOH A 71 771 41 HOH HOH . D 4 HOH A 72 772 163 HOH HOH . D 4 HOH A 73 773 138 HOH HOH . D 4 HOH A 74 774 248 HOH HOH . D 4 HOH A 75 775 174 HOH HOH . D 4 HOH A 76 776 71 HOH HOH . D 4 HOH A 77 777 94 HOH HOH . D 4 HOH A 78 778 63 HOH HOH . D 4 HOH A 79 779 129 HOH HOH . D 4 HOH A 80 780 110 HOH HOH . D 4 HOH A 81 781 206 HOH HOH . D 4 HOH A 82 782 24 HOH HOH . D 4 HOH A 83 783 224 HOH HOH . D 4 HOH A 84 784 51 HOH HOH . D 4 HOH A 85 785 26 HOH HOH . D 4 HOH A 86 786 202 HOH HOH . D 4 HOH A 87 787 189 HOH HOH . D 4 HOH A 88 788 4 HOH HOH . D 4 HOH A 89 789 39 HOH HOH . D 4 HOH A 90 790 45 HOH HOH . D 4 HOH A 91 791 36 HOH HOH . D 4 HOH A 92 792 86 HOH HOH . D 4 HOH A 93 793 28 HOH HOH . D 4 HOH A 94 794 15 HOH HOH . D 4 HOH A 95 795 6 HOH HOH . D 4 HOH A 96 796 106 HOH HOH . D 4 HOH A 97 797 20 HOH HOH . D 4 HOH A 98 798 14 HOH HOH . D 4 HOH A 99 799 147 HOH HOH . D 4 HOH A 100 800 62 HOH HOH . D 4 HOH A 101 801 136 HOH HOH . D 4 HOH A 102 802 111 HOH HOH . D 4 HOH A 103 803 128 HOH HOH . D 4 HOH A 104 804 2 HOH HOH . D 4 HOH A 105 805 127 HOH HOH . D 4 HOH A 106 806 219 HOH HOH . D 4 HOH A 107 807 23 HOH HOH . D 4 HOH A 108 808 222 HOH HOH . D 4 HOH A 109 809 57 HOH HOH . D 4 HOH A 110 810 91 HOH HOH . D 4 HOH A 111 811 177 HOH HOH . D 4 HOH A 112 812 119 HOH HOH . D 4 HOH A 113 813 195 HOH HOH . D 4 HOH A 114 814 182 HOH HOH . D 4 HOH A 115 815 98 HOH HOH . D 4 HOH A 116 816 40 HOH HOH . D 4 HOH A 117 817 37 HOH HOH . D 4 HOH A 118 818 92 HOH HOH . D 4 HOH A 119 819 61 HOH HOH . D 4 HOH A 120 820 227 HOH HOH . D 4 HOH A 121 821 48 HOH HOH . D 4 HOH A 122 822 153 HOH HOH . D 4 HOH A 123 823 134 HOH HOH . D 4 HOH A 124 824 33 HOH HOH . D 4 HOH A 125 825 84 HOH HOH . D 4 HOH A 126 826 172 HOH HOH . D 4 HOH A 127 827 123 HOH HOH . D 4 HOH A 128 828 25 HOH HOH . D 4 HOH A 129 829 159 HOH HOH . D 4 HOH A 130 830 81 HOH HOH . D 4 HOH A 131 831 198 HOH HOH . D 4 HOH A 132 832 8 HOH HOH . D 4 HOH A 133 833 220 HOH HOH . D 4 HOH A 134 834 142 HOH HOH . D 4 HOH A 135 835 133 HOH HOH . D 4 HOH A 136 836 213 HOH HOH . D 4 HOH A 137 837 10 HOH HOH . D 4 HOH A 138 838 18 HOH HOH . D 4 HOH A 139 839 176 HOH HOH . D 4 HOH A 140 840 100 HOH HOH . D 4 HOH A 141 841 65 HOH HOH . D 4 HOH A 142 842 151 HOH HOH . D 4 HOH A 143 843 170 HOH HOH . D 4 HOH A 144 844 193 HOH HOH . D 4 HOH A 145 845 7 HOH HOH . D 4 HOH A 146 846 101 HOH HOH . D 4 HOH A 147 847 46 HOH HOH . D 4 HOH A 148 848 258 HOH HOH . D 4 HOH A 149 849 139 HOH HOH . D 4 HOH A 150 850 44 HOH HOH . D 4 HOH A 151 851 112 HOH HOH . D 4 HOH A 152 852 149 HOH HOH . D 4 HOH A 153 853 22 HOH HOH . D 4 HOH A 154 854 262 HOH HOH . D 4 HOH A 155 855 154 HOH HOH . D 4 HOH A 156 856 93 HOH HOH . D 4 HOH A 157 857 140 HOH HOH . D 4 HOH A 158 858 237 HOH HOH . D 4 HOH A 159 859 188 HOH HOH . D 4 HOH A 160 860 191 HOH HOH . D 4 HOH A 161 861 156 HOH HOH . D 4 HOH A 162 862 109 HOH HOH . D 4 HOH A 163 863 50 HOH HOH . D 4 HOH A 164 864 5 HOH HOH . D 4 HOH A 165 865 215 HOH HOH . D 4 HOH A 166 866 132 HOH HOH . D 4 HOH A 167 867 124 HOH HOH . D 4 HOH A 168 868 171 HOH HOH . D 4 HOH A 169 869 104 HOH HOH . D 4 HOH A 170 870 87 HOH HOH . D 4 HOH A 171 871 131 HOH HOH . D 4 HOH A 172 872 218 HOH HOH . D 4 HOH A 173 873 216 HOH HOH . D 4 HOH A 174 874 80 HOH HOH . D 4 HOH A 175 875 52 HOH HOH . D 4 HOH A 176 876 70 HOH HOH . D 4 HOH A 177 877 11 HOH HOH . D 4 HOH A 178 878 43 HOH HOH . D 4 HOH A 179 879 60 HOH HOH . D 4 HOH A 180 880 164 HOH HOH . D 4 HOH A 181 881 79 HOH HOH . D 4 HOH A 182 882 207 HOH HOH . D 4 HOH A 183 883 103 HOH HOH . D 4 HOH A 184 884 143 HOH HOH . D 4 HOH A 185 885 29 HOH HOH . D 4 HOH A 186 886 90 HOH HOH . D 4 HOH A 187 887 152 HOH HOH . D 4 HOH A 188 888 144 HOH HOH . D 4 HOH A 189 889 118 HOH HOH . D 4 HOH A 190 890 108 HOH HOH . D 4 HOH A 191 891 157 HOH HOH . D 4 HOH A 192 892 168 HOH HOH . D 4 HOH A 193 893 19 HOH HOH . D 4 HOH A 194 894 204 HOH HOH . D 4 HOH A 195 895 114 HOH HOH . D 4 HOH A 196 896 38 HOH HOH . D 4 HOH A 197 897 158 HOH HOH . D 4 HOH A 198 898 89 HOH HOH . D 4 HOH A 199 899 59 HOH HOH . D 4 HOH A 200 900 27 HOH HOH . D 4 HOH A 201 901 55 HOH HOH . D 4 HOH A 202 902 212 HOH HOH . D 4 HOH A 203 903 184 HOH HOH . D 4 HOH A 204 904 16 HOH HOH . D 4 HOH A 205 905 42 HOH HOH . D 4 HOH A 206 906 173 HOH HOH . D 4 HOH A 207 907 85 HOH HOH . D 4 HOH A 208 908 66 HOH HOH . D 4 HOH A 209 909 117 HOH HOH . D 4 HOH A 210 910 58 HOH HOH . D 4 HOH A 211 911 150 HOH HOH . D 4 HOH A 212 912 12 HOH HOH . D 4 HOH A 213 913 192 HOH HOH . D 4 HOH A 214 914 162 HOH HOH . D 4 HOH A 215 915 72 HOH HOH . D 4 HOH A 216 916 77 HOH HOH . D 4 HOH A 217 917 249 HOH HOH . D 4 HOH A 218 918 186 HOH HOH . D 4 HOH A 219 919 180 HOH HOH . D 4 HOH A 220 920 205 HOH HOH . D 4 HOH A 221 921 240 HOH HOH . D 4 HOH A 222 922 211 HOH HOH . D 4 HOH A 223 923 121 HOH HOH . D 4 HOH A 224 924 99 HOH HOH . D 4 HOH A 225 925 229 HOH HOH . D 4 HOH A 226 926 226 HOH HOH . D 4 HOH A 227 927 257 HOH HOH . D 4 HOH A 228 928 210 HOH HOH . D 4 HOH A 229 929 197 HOH HOH . D 4 HOH A 230 930 178 HOH HOH . D 4 HOH A 231 931 244 HOH HOH . D 4 HOH A 232 932 74 HOH HOH . D 4 HOH A 233 933 49 HOH HOH . D 4 HOH A 234 934 232 HOH HOH . D 4 HOH A 235 935 255 HOH HOH . D 4 HOH A 236 936 239 HOH HOH . D 4 HOH A 237 937 231 HOH HOH . D 4 HOH A 238 938 260 HOH HOH . D 4 HOH A 239 939 254 HOH HOH . D 4 HOH A 240 940 247 HOH HOH . D 4 HOH A 241 941 230 HOH HOH . D 4 HOH A 242 942 238 HOH HOH . D 4 HOH A 243 943 245 HOH HOH . D 4 HOH A 244 944 242 HOH HOH . D 4 HOH A 245 945 253 HOH HOH . D 4 HOH A 246 946 250 HOH HOH . D 4 HOH A 247 947 166 HOH HOH . D 4 HOH A 248 948 236 HOH HOH . D 4 HOH A 249 949 228 HOH HOH . D 4 HOH A 250 950 234 HOH HOH . D 4 HOH A 251 951 243 HOH HOH . D 4 HOH A 252 952 263 HOH HOH . D 4 HOH A 253 953 256 HOH HOH . D 4 HOH A 254 954 241 HOH HOH . D 4 HOH A 255 955 259 HOH HOH . D 4 HOH A 256 956 233 HOH HOH . D 4 HOH A 257 957 251 HOH HOH . D 4 HOH A 258 958 261 HOH HOH . D 4 HOH A 259 959 235 HOH HOH . D 4 HOH A 260 960 217 HOH HOH . D 4 HOH A 261 961 252 HOH HOH . D 4 HOH A 262 962 208 HOH HOH . D 4 HOH A 263 963 246 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 3WJ . . . B 2 18.635 70.191 4.235 1 15.48 ? C2 3WJ 601 A 1 HETATM 2 C C3 3WJ . . . B 2 20.452 70.318 5.796 1 17.94 ? C3 3WJ 601 A 1 HETATM 3 N N6 3WJ . . . B 2 19.368 70.744 3.275 1 14.44 ? N6 3WJ 601 A 1 HETATM 4 C C7 3WJ . . . B 2 20.737 71.636 6.105 1 18.4 ? C7 3WJ 601 A 1 HETATM 5 C C8 3WJ . . . B 2 21.463 69.372 5.822 1 19.68 ? C8 3WJ 601 A 1 HETATM 6 C C9 3WJ . . . B 2 17.085 69.035 6.253 1 17.6 ? C9 3WJ 601 A 1 HETATM 7 C C10 3WJ . . . B 2 16.479 69.225 4.999 1 19.38 ? C10 3WJ 601 A 1 HETATM 8 C C11 3WJ . . . B 2 16.783 70.091 2.681 1 16.82 ? C11 3WJ 601 A 1 HETATM 9 C C12 3WJ . . . B 2 18.838 70.95 2.097 1 14.65 ? C12 3WJ 601 A 1 HETATM 10 C C13 3WJ . . . B 2 22.019 72.018 6.43 1 21.84 ? C13 3WJ 601 A 1 HETATM 11 C C14 3WJ . . . B 2 22.75 69.749 6.143 1 24.23 ? C14 3WJ 601 A 1 HETATM 12 N N1 3WJ . . . B 2 19.133 69.958 5.479 1 17.67 ? N1 3WJ 601 A 1 HETATM 13 C C4 3WJ . . . B 2 18.359 69.403 6.446 1 18.84 ? C4 3WJ 601 A 1 HETATM 14 C C5 3WJ . . . B 2 17.299 69.838 3.953 1 13.56 ? C5 3WJ 601 A 1 HETATM 15 O O15 3WJ . . . B 2 15.336 68.886 4.801 1 18.03 ? O15 3WJ 601 A 1 HETATM 16 N N16 3WJ . . . B 2 17.591 70.647 1.787 1 12.51 ? N16 3WJ 601 A 1 HETATM 17 N N17 3WJ . . . B 2 15.479 69.751 2.384 1 14.83 ? N17 3WJ 601 A 1 HETATM 18 C C18 3WJ . . . B 2 23.032 71.073 6.45 1 26.26 ? C18 3WJ 601 A 1 HETATM 19 N N19 3WJ . . . B 2 24.336 71.468 6.772 1 28.64 ? N19 3WJ 601 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #