data_4X2K # _model_server_result.job_id O-4zHvgovwAGdesbS3psLA _model_server_result.datetime_utc '2024-12-18 01:44:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4X2K # _exptl.entry_id 4X2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 253.259 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(3-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X2K _cell.length_a 42.31 _cell.length_b 77.51 _cell.length_c 90.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details MONOMERIC _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H11 N5 O' _chem_comp.formula_weight 253.259 _chem_comp.id 3WO _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(3-aminophenyl)amino]pyrido[2,3-d]pyrimidin-5(6H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N7 C8 3WO doub 1 n y N7 C6 3WO sing 2 n y C8 N9 3WO sing 3 n y N3 C6 3WO sing 4 n n N3 C2 3WO doub 5 n n C6 C5 3WO doub 6 n y N9 C10 3WO doub 7 n y C2 C1 3WO sing 8 n n C5 C10 3WO sing 9 n y C5 C4 3WO sing 10 n n C10 N12 3WO sing 11 n n C1 C4 3WO sing 12 n n C18 C16 3WO doub 13 n y C18 C13 3WO sing 14 n y C4 O11 3WO doub 15 n n C16 C15 3WO sing 16 n y N12 C13 3WO sing 17 n n C13 C14 3WO doub 18 n y C15 C17 3WO doub 19 n y C14 C17 3WO sing 20 n y C17 N19 3WO sing 21 n n C1 H1 3WO sing 22 n n C1 H2 3WO sing 23 n n C2 H3 3WO sing 24 n n C8 H4 3WO sing 25 n n C14 H5 3WO sing 26 n n C15 H6 3WO sing 27 n n C16 H7 3WO sing 28 n n N12 H8 3WO sing 29 n n C18 H9 3WO sing 30 n n N19 H10 3WO sing 31 n n N19 H11 3WO sing 32 n n # _atom_sites.entry_id 4X2K _atom_sites.fract_transf_matrix[1][1] 0.023635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3WO A 1 601 1 3WO INH . C 3 SO4 A 1 602 1 SO4 SO4 . D 4 HOH A 1 701 226 HOH HOH . D 4 HOH A 2 702 43 HOH HOH . D 4 HOH A 3 703 213 HOH HOH . D 4 HOH A 4 704 95 HOH HOH . D 4 HOH A 5 705 220 HOH HOH . D 4 HOH A 6 706 223 HOH HOH . D 4 HOH A 7 707 106 HOH HOH . D 4 HOH A 8 708 119 HOH HOH . D 4 HOH A 9 709 31 HOH HOH . D 4 HOH A 10 710 17 HOH HOH . D 4 HOH A 11 711 103 HOH HOH . D 4 HOH A 12 712 178 HOH HOH . D 4 HOH A 13 713 102 HOH HOH . D 4 HOH A 14 714 20 HOH HOH . D 4 HOH A 15 715 29 HOH HOH . D 4 HOH A 16 716 21 HOH HOH . D 4 HOH A 17 717 14 HOH HOH . D 4 HOH A 18 718 142 HOH HOH . D 4 HOH A 19 719 127 HOH HOH . D 4 HOH A 20 720 87 HOH HOH . D 4 HOH A 21 721 69 HOH HOH . D 4 HOH A 22 722 198 HOH HOH . D 4 HOH A 23 723 92 HOH HOH . D 4 HOH A 24 724 23 HOH HOH . D 4 HOH A 25 725 99 HOH HOH . D 4 HOH A 26 726 176 HOH HOH . D 4 HOH A 27 727 32 HOH HOH . D 4 HOH A 28 728 193 HOH HOH . D 4 HOH A 29 729 40 HOH HOH . D 4 HOH A 30 730 5 HOH HOH . D 4 HOH A 31 731 163 HOH HOH . D 4 HOH A 32 732 141 HOH HOH . D 4 HOH A 33 733 74 HOH HOH . D 4 HOH A 34 734 185 HOH HOH . D 4 HOH A 35 735 128 HOH HOH . D 4 HOH A 36 736 28 HOH HOH . D 4 HOH A 37 737 7 HOH HOH . D 4 HOH A 38 738 218 HOH HOH . D 4 HOH A 39 739 115 HOH HOH . D 4 HOH A 40 740 135 HOH HOH . D 4 HOH A 41 741 85 HOH HOH . D 4 HOH A 42 742 45 HOH HOH . D 4 HOH A 43 743 154 HOH HOH . D 4 HOH A 44 744 134 HOH HOH . D 4 HOH A 45 745 46 HOH HOH . D 4 HOH A 46 746 89 HOH HOH . D 4 HOH A 47 747 68 HOH HOH . D 4 HOH A 48 748 122 HOH HOH . D 4 HOH A 49 749 34 HOH HOH . D 4 HOH A 50 750 57 HOH HOH . D 4 HOH A 51 751 42 HOH HOH . D 4 HOH A 52 752 189 HOH HOH . D 4 HOH A 53 753 125 HOH HOH . D 4 HOH A 54 754 54 HOH HOH . D 4 HOH A 55 755 165 HOH HOH . D 4 HOH A 56 756 147 HOH HOH . D 4 HOH A 57 757 179 HOH HOH . D 4 HOH A 58 758 118 HOH HOH . D 4 HOH A 59 759 35 HOH HOH . D 4 HOH A 60 760 63 HOH HOH . D 4 HOH A 61 761 55 HOH HOH . D 4 HOH A 62 762 30 HOH HOH . D 4 HOH A 63 763 171 HOH HOH . D 4 HOH A 64 764 25 HOH HOH . D 4 HOH A 65 765 203 HOH HOH . D 4 HOH A 66 766 164 HOH HOH . D 4 HOH A 67 767 206 HOH HOH . D 4 HOH A 68 768 190 HOH HOH . D 4 HOH A 69 769 150 HOH HOH . D 4 HOH A 70 770 91 HOH HOH . D 4 HOH A 71 771 158 HOH HOH . D 4 HOH A 72 772 174 HOH HOH . D 4 HOH A 73 773 107 HOH HOH . D 4 HOH A 74 774 192 HOH HOH . D 4 HOH A 75 775 100 HOH HOH . D 4 HOH A 76 776 173 HOH HOH . D 4 HOH A 77 777 86 HOH HOH . D 4 HOH A 78 778 59 HOH HOH . D 4 HOH A 79 779 230 HOH HOH . D 4 HOH A 80 780 130 HOH HOH . D 4 HOH A 81 781 41 HOH HOH . D 4 HOH A 82 782 182 HOH HOH . D 4 HOH A 83 783 211 HOH HOH . D 4 HOH A 84 784 228 HOH HOH . D 4 HOH A 85 785 239 HOH HOH . D 4 HOH A 86 786 72 HOH HOH . D 4 HOH A 87 787 219 HOH HOH . D 4 HOH A 88 788 153 HOH HOH . D 4 HOH A 89 789 217 HOH HOH . D 4 HOH A 90 790 235 HOH HOH . D 4 HOH A 91 791 184 HOH HOH . D 4 HOH A 92 792 242 HOH HOH . D 4 HOH A 93 793 241 HOH HOH . D 4 HOH A 94 794 195 HOH HOH . D 4 HOH A 95 795 197 HOH HOH . D 4 HOH A 96 796 243 HOH HOH . D 4 HOH A 97 797 1 HOH HOH . D 4 HOH A 98 798 2 HOH HOH . D 4 HOH A 99 799 3 HOH HOH . D 4 HOH A 100 800 4 HOH HOH . D 4 HOH A 101 801 6 HOH HOH . D 4 HOH A 102 802 8 HOH HOH . D 4 HOH A 103 803 9 HOH HOH . D 4 HOH A 104 804 10 HOH HOH . D 4 HOH A 105 805 11 HOH HOH . D 4 HOH A 106 806 12 HOH HOH . D 4 HOH A 107 807 13 HOH HOH . D 4 HOH A 108 808 15 HOH HOH . D 4 HOH A 109 809 16 HOH HOH . D 4 HOH A 110 810 18 HOH HOH . D 4 HOH A 111 811 19 HOH HOH . D 4 HOH A 112 812 22 HOH HOH . D 4 HOH A 113 813 24 HOH HOH . D 4 HOH A 114 814 26 HOH HOH . D 4 HOH A 115 815 27 HOH HOH . D 4 HOH A 116 816 33 HOH HOH . D 4 HOH A 117 817 36 HOH HOH . D 4 HOH A 118 818 37 HOH HOH . D 4 HOH A 119 819 38 HOH HOH . D 4 HOH A 120 820 39 HOH HOH . D 4 HOH A 121 821 44 HOH HOH . D 4 HOH A 122 822 47 HOH HOH . D 4 HOH A 123 823 48 HOH HOH . D 4 HOH A 124 824 49 HOH HOH . D 4 HOH A 125 825 50 HOH HOH . D 4 HOH A 126 826 51 HOH HOH . D 4 HOH A 127 827 52 HOH HOH . D 4 HOH A 128 828 53 HOH HOH . D 4 HOH A 129 829 56 HOH HOH . D 4 HOH A 130 830 58 HOH HOH . D 4 HOH A 131 831 60 HOH HOH . D 4 HOH A 132 832 61 HOH HOH . D 4 HOH A 133 833 62 HOH HOH . D 4 HOH A 134 834 64 HOH HOH . D 4 HOH A 135 835 65 HOH HOH . D 4 HOH A 136 836 66 HOH HOH . D 4 HOH A 137 837 67 HOH HOH . D 4 HOH A 138 838 70 HOH HOH . D 4 HOH A 139 839 71 HOH HOH . D 4 HOH A 140 840 73 HOH HOH . D 4 HOH A 141 841 75 HOH HOH . D 4 HOH A 142 842 76 HOH HOH . D 4 HOH A 143 843 77 HOH HOH . D 4 HOH A 144 844 78 HOH HOH . D 4 HOH A 145 845 79 HOH HOH . D 4 HOH A 146 846 80 HOH HOH . D 4 HOH A 147 847 81 HOH HOH . D 4 HOH A 148 848 82 HOH HOH . D 4 HOH A 149 849 83 HOH HOH . D 4 HOH A 150 850 84 HOH HOH . D 4 HOH A 151 851 88 HOH HOH . D 4 HOH A 152 852 90 HOH HOH . D 4 HOH A 153 853 93 HOH HOH . D 4 HOH A 154 854 94 HOH HOH . D 4 HOH A 155 855 96 HOH HOH . D 4 HOH A 156 856 97 HOH HOH . D 4 HOH A 157 857 98 HOH HOH . D 4 HOH A 158 858 101 HOH HOH . D 4 HOH A 159 859 104 HOH HOH . D 4 HOH A 160 860 105 HOH HOH . D 4 HOH A 161 861 108 HOH HOH . D 4 HOH A 162 862 109 HOH HOH . D 4 HOH A 163 863 110 HOH HOH . D 4 HOH A 164 864 111 HOH HOH . D 4 HOH A 165 865 112 HOH HOH . D 4 HOH A 166 866 113 HOH HOH . D 4 HOH A 167 867 114 HOH HOH . D 4 HOH A 168 868 116 HOH HOH . D 4 HOH A 169 869 117 HOH HOH . D 4 HOH A 170 870 120 HOH HOH . D 4 HOH A 171 871 121 HOH HOH . D 4 HOH A 172 872 123 HOH HOH . D 4 HOH A 173 873 124 HOH HOH . D 4 HOH A 174 874 126 HOH HOH . D 4 HOH A 175 875 129 HOH HOH . D 4 HOH A 176 876 131 HOH HOH . D 4 HOH A 177 877 132 HOH HOH . D 4 HOH A 178 878 133 HOH HOH . D 4 HOH A 179 879 136 HOH HOH . D 4 HOH A 180 880 137 HOH HOH . D 4 HOH A 181 881 138 HOH HOH . D 4 HOH A 182 882 139 HOH HOH . D 4 HOH A 183 883 140 HOH HOH . D 4 HOH A 184 884 143 HOH HOH . D 4 HOH A 185 885 144 HOH HOH . D 4 HOH A 186 886 145 HOH HOH . D 4 HOH A 187 887 146 HOH HOH . D 4 HOH A 188 888 148 HOH HOH . D 4 HOH A 189 889 149 HOH HOH . D 4 HOH A 190 890 151 HOH HOH . D 4 HOH A 191 891 152 HOH HOH . D 4 HOH A 192 892 155 HOH HOH . D 4 HOH A 193 893 156 HOH HOH . D 4 HOH A 194 894 157 HOH HOH . D 4 HOH A 195 895 159 HOH HOH . D 4 HOH A 196 896 160 HOH HOH . D 4 HOH A 197 897 161 HOH HOH . D 4 HOH A 198 898 162 HOH HOH . D 4 HOH A 199 899 166 HOH HOH . D 4 HOH A 200 900 167 HOH HOH . D 4 HOH A 201 901 168 HOH HOH . D 4 HOH A 202 902 169 HOH HOH . D 4 HOH A 203 903 170 HOH HOH . D 4 HOH A 204 904 172 HOH HOH . D 4 HOH A 205 905 175 HOH HOH . D 4 HOH A 206 906 177 HOH HOH . D 4 HOH A 207 907 180 HOH HOH . D 4 HOH A 208 908 181 HOH HOH . D 4 HOH A 209 909 183 HOH HOH . D 4 HOH A 210 910 186 HOH HOH . D 4 HOH A 211 911 187 HOH HOH . D 4 HOH A 212 912 188 HOH HOH . D 4 HOH A 213 913 191 HOH HOH . D 4 HOH A 214 914 194 HOH HOH . D 4 HOH A 215 915 196 HOH HOH . D 4 HOH A 216 916 199 HOH HOH . D 4 HOH A 217 917 200 HOH HOH . D 4 HOH A 218 918 201 HOH HOH . D 4 HOH A 219 919 202 HOH HOH . D 4 HOH A 220 920 204 HOH HOH . D 4 HOH A 221 921 205 HOH HOH . D 4 HOH A 222 922 207 HOH HOH . D 4 HOH A 223 923 208 HOH HOH . D 4 HOH A 224 924 209 HOH HOH . D 4 HOH A 225 925 210 HOH HOH . D 4 HOH A 226 926 212 HOH HOH . D 4 HOH A 227 927 214 HOH HOH . D 4 HOH A 228 928 215 HOH HOH . D 4 HOH A 229 929 216 HOH HOH . D 4 HOH A 230 930 221 HOH HOH . D 4 HOH A 231 931 222 HOH HOH . D 4 HOH A 232 932 224 HOH HOH . D 4 HOH A 233 933 225 HOH HOH . D 4 HOH A 234 934 227 HOH HOH . D 4 HOH A 235 935 229 HOH HOH . D 4 HOH A 236 936 231 HOH HOH . D 4 HOH A 237 937 232 HOH HOH . D 4 HOH A 238 938 233 HOH HOH . D 4 HOH A 239 939 234 HOH HOH . D 4 HOH A 240 940 236 HOH HOH . D 4 HOH A 241 941 237 HOH HOH . D 4 HOH A 242 942 238 HOH HOH . D 4 HOH A 243 943 240 HOH HOH . D 4 HOH A 244 944 244 HOH HOH . D 4 HOH A 245 945 245 HOH HOH . D 4 HOH A 246 946 246 HOH HOH . D 4 HOH A 247 947 247 HOH HOH . D 4 HOH A 248 948 248 HOH HOH . D 4 HOH A 249 949 249 HOH HOH . D 4 HOH A 250 950 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3WO . . . B 2 20.29 70.28 4.322 1 21.82 ? C1 3WO 601 A 1 HETATM 2 C C2 3WO . . . B 2 20.444 70.922 3.155 1 21.04 ? C2 3WO 601 A 1 HETATM 3 C C8 3WO . . . B 2 16.058 70.13 1.797 1 16.74 ? C8 3WO 601 A 1 HETATM 4 C C10 3WO . . . B 2 16.672 69.232 3.843 1 21.85 ? C10 3WO 601 A 1 HETATM 5 C C13 3WO . A . B 2 15.254 67.781 5.23 0.5 23.4 ? C13 3WO 601 A 1 HETATM 6 C C13 3WO . B . B 2 15.24 67.791 5.208 0.5 23.77 ? C13 3WO 601 A 1 HETATM 7 C C14 3WO . A . B 2 14.428 68.13 6.298 0.5 22.11 ? C14 3WO 601 A 1 HETATM 8 C C14 3WO . B . B 2 14.819 66.801 4.308 0.5 22.77 ? C14 3WO 601 A 1 HETATM 9 C C15 3WO . A . B 2 12.981 66.277 5.765 0.5 22.31 ? C15 3WO 601 A 1 HETATM 10 C C15 3WO . B . B 2 12.919 66.35 5.745 0.5 23.86 ? C15 3WO 601 A 1 HETATM 11 C C16 3WO . A . B 2 13.82 65.909 4.713 0.5 24.78 ? C16 3WO 601 A 1 HETATM 12 C C16 3WO . B . B 2 13.352 67.32 6.631 0.5 23.58 ? C16 3WO 601 A 1 HETATM 13 N N3 3WO . . . B 2 19.455 71.023 2.24 1 22.09 ? N3 3WO 601 A 1 HETATM 14 C C4 3WO . . . B 2 19.057 69.664 4.641 1 22.36 ? C4 3WO 601 A 1 HETATM 15 C C5 3WO . . . B 2 17.962 69.772 3.657 1 20.3 ? C5 3WO 601 A 1 HETATM 16 C C6 3WO . . . B 2 18.227 70.477 2.449 1 21.68 ? C6 3WO 601 A 1 HETATM 17 N N7 3WO . . . B 2 17.26 70.633 1.56 1 18.1 ? N7 3WO 601 A 1 HETATM 18 N N9 3WO . . . B 2 15.75 69.447 2.884 1 17.48 ? N9 3WO 601 A 1 HETATM 19 O O11 3WO . . . B 2 18.929 69.111 5.718 1 25.84 ? O11 3WO 601 A 1 HETATM 20 N N12 3WO . . . B 2 16.409 68.537 5.006 1 24.16 ? N12 3WO 601 A 1 HETATM 21 C C17 3WO . A . B 2 13.277 67.387 6.558 0.5 18.66 ? C17 3WO 601 A 1 HETATM 22 C C17 3WO . B . B 2 13.645 66.089 4.577 0.5 23.2 ? C17 3WO 601 A 1 HETATM 23 C C18 3WO . A . B 2 14.966 66.652 4.45 0.5 23.86 ? C18 3WO 601 A 1 HETATM 24 C C18 3WO . B . B 2 14.513 68.029 6.374 0.5 24.31 ? C18 3WO 601 A 1 HETATM 25 N N19 3WO . A . B 2 12.409 67.773 7.594 0.5 12.05 ? N19 3WO 601 A 1 HETATM 26 N N19 3WO . B . B 2 13.184 65.109 3.701 0.5 18.43 ? N19 3WO 601 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #