data_4X53 # _model_server_result.job_id RiiEcglpAnZWXRrDvcIQHQ _model_server_result.datetime_utc '2024-11-28 14:25:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4X53 # _exptl.entry_id 4X53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.449 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X53 _cell.length_a 102.452 _cell.length_b 102.452 _cell.length_c 87.217 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 81 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C20 _struct_conn.ptnr2_label_comp_id AZR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AZR _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.43 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C13 H19 N5 O8 S2' _chem_comp.formula_weight 437.449 _chem_comp.id AZR _chem_comp.mon_nstd_flag . _chem_comp.name '2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'AZTREONAM, open form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C18 AZR sing 70 n n S8 C26 AZR sing 71 n y O10 C21 AZR doub 72 n n O11 N14 AZR sing 73 n n O11 C23 AZR sing 74 n n N12 C18 AZR sing 75 n n N12 S17 AZR sing 76 n n N15 C26 AZR doub 77 n y S17 O33 AZR sing 78 n n C19 N13 AZR sing 79 n n C19 C18 AZR sing 80 n n C19 C20 AZR sing 81 n n C20 O9 AZR doub 82 n n C21 N13 AZR sing 83 n n C21 C22 AZR sing 84 n n C22 N14 AZR doub 85 z n C22 C24 AZR sing 86 n n C23 C29 AZR sing 87 n n C23 C28 AZR sing 88 n n C24 N15 AZR sing 89 n y C25 S8 AZR sing 90 n y C25 C24 AZR doub 91 n y C26 N16 AZR sing 92 n n C27 C23 AZR sing 93 n n C29 O31 AZR sing 94 n n O30 C29 AZR doub 95 n n O32 S17 AZR doub 96 n n O34 S17 AZR doub 97 n n C7 H7 AZR sing 98 n n C7 H7A AZR sing 99 n n C7 H7B AZR sing 100 n n N12 HN12 AZR sing 101 n n N13 HN13 AZR sing 102 n n N16 HN16 AZR sing 103 n n N16 HN1A AZR sing 104 n n C18 H18 AZR sing 105 n n C19 H19 AZR sing 106 n n C20 H20 AZR sing 107 n n C25 H25 AZR sing 108 n n C27 H27 AZR sing 109 n n C27 H27A AZR sing 110 n n C27 H27B AZR sing 111 n n C28 H28 AZR sing 112 n n C28 H28A AZR sing 113 n n C28 H28B AZR sing 114 n n O31 HO31 AZR sing 115 n n O33 HO33 AZR sing 116 n n # _atom_sites.entry_id 4X53 _atom_sites.fract_transf_matrix[1][1] 0.009761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009761 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AZR A 1 301 1 AZR AZR . C 3 BCT A 1 302 1 BCT BCT . D 4 HOH A 1 401 78 HOH HOH . D 4 HOH A 2 402 44 HOH HOH . D 4 HOH A 3 403 38 HOH HOH . D 4 HOH A 4 404 56 HOH HOH . D 4 HOH A 5 405 76 HOH HOH . D 4 HOH A 6 406 84 HOH HOH . D 4 HOH A 7 407 47 HOH HOH . D 4 HOH A 8 408 39 HOH HOH . D 4 HOH A 9 409 33 HOH HOH . D 4 HOH A 10 410 67 HOH HOH . D 4 HOH A 11 411 79 HOH HOH . D 4 HOH A 12 412 34 HOH HOH . D 4 HOH A 13 413 7 HOH HOH . D 4 HOH A 14 414 68 HOH HOH . D 4 HOH A 15 415 95 HOH HOH . D 4 HOH A 16 416 82 HOH HOH . D 4 HOH A 17 417 48 HOH HOH . D 4 HOH A 18 418 69 HOH HOH . D 4 HOH A 19 419 20 HOH HOH . D 4 HOH A 20 420 31 HOH HOH . D 4 HOH A 21 421 60 HOH HOH . D 4 HOH A 22 422 29 HOH HOH . D 4 HOH A 23 423 58 HOH HOH . D 4 HOH A 24 424 59 HOH HOH . D 4 HOH A 25 425 45 HOH HOH . D 4 HOH A 26 426 61 HOH HOH . D 4 HOH A 27 427 49 HOH HOH . D 4 HOH A 28 428 66 HOH HOH . D 4 HOH A 29 429 90 HOH HOH . D 4 HOH A 30 430 96 HOH HOH . D 4 HOH A 31 431 71 HOH HOH . D 4 HOH A 32 432 1 HOH HOH . D 4 HOH A 33 433 2 HOH HOH . D 4 HOH A 34 434 3 HOH HOH . D 4 HOH A 35 435 4 HOH HOH . D 4 HOH A 36 436 5 HOH HOH . D 4 HOH A 37 437 6 HOH HOH . D 4 HOH A 38 438 8 HOH HOH . D 4 HOH A 39 439 9 HOH HOH . D 4 HOH A 40 440 10 HOH HOH . D 4 HOH A 41 441 11 HOH HOH . D 4 HOH A 42 442 12 HOH HOH . D 4 HOH A 43 443 13 HOH HOH . D 4 HOH A 44 444 14 HOH HOH . D 4 HOH A 45 445 15 HOH HOH . D 4 HOH A 46 446 16 HOH HOH . D 4 HOH A 47 447 17 HOH HOH . D 4 HOH A 48 448 18 HOH HOH . D 4 HOH A 49 449 19 HOH HOH . D 4 HOH A 50 450 21 HOH HOH . D 4 HOH A 51 451 22 HOH HOH . D 4 HOH A 52 452 23 HOH HOH . D 4 HOH A 53 453 24 HOH HOH . D 4 HOH A 54 454 25 HOH HOH . D 4 HOH A 55 455 26 HOH HOH . D 4 HOH A 56 456 27 HOH HOH . D 4 HOH A 57 457 28 HOH HOH . D 4 HOH A 58 458 30 HOH HOH . D 4 HOH A 59 459 32 HOH HOH . D 4 HOH A 60 460 35 HOH HOH . D 4 HOH A 61 461 36 HOH HOH . D 4 HOH A 62 462 37 HOH HOH . D 4 HOH A 63 463 40 HOH HOH . D 4 HOH A 64 464 41 HOH HOH . D 4 HOH A 65 465 42 HOH HOH . D 4 HOH A 66 466 43 HOH HOH . D 4 HOH A 67 467 46 HOH HOH . D 4 HOH A 68 468 50 HOH HOH . D 4 HOH A 69 469 51 HOH HOH . D 4 HOH A 70 470 52 HOH HOH . D 4 HOH A 71 471 53 HOH HOH . D 4 HOH A 72 472 54 HOH HOH . D 4 HOH A 73 473 55 HOH HOH . D 4 HOH A 74 474 57 HOH HOH . D 4 HOH A 75 475 62 HOH HOH . D 4 HOH A 76 476 63 HOH HOH . D 4 HOH A 77 477 64 HOH HOH . D 4 HOH A 78 478 65 HOH HOH . D 4 HOH A 79 479 70 HOH HOH . D 4 HOH A 80 480 72 HOH HOH . D 4 HOH A 81 481 73 HOH HOH . D 4 HOH A 82 482 74 HOH HOH . D 4 HOH A 83 483 75 HOH HOH . D 4 HOH A 84 484 77 HOH HOH . D 4 HOH A 85 485 80 HOH HOH . D 4 HOH A 86 486 81 HOH HOH . D 4 HOH A 87 487 83 HOH HOH . D 4 HOH A 88 488 85 HOH HOH . D 4 HOH A 89 489 86 HOH HOH . D 4 HOH A 90 490 87 HOH HOH . D 4 HOH A 91 491 88 HOH HOH . D 4 HOH A 92 492 89 HOH HOH . D 4 HOH A 93 493 91 HOH HOH . D 4 HOH A 94 494 92 HOH HOH . D 4 HOH A 95 495 93 HOH HOH . D 4 HOH A 96 496 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 AZR . . . B 2 32.944 -1.502 8.276 1 60.72 ? C7 AZR 301 A 1 HETATM 2 S S8 AZR . . . B 2 27.639 -0.801 1.196 1 51.56 ? S8 AZR 301 A 1 HETATM 3 O O9 AZR . . . B 2 29.649 1.315 6.901 1 31.4 ? O9 AZR 301 A 1 HETATM 4 O O10 AZR . . . B 2 30.862 -2.774 5.147 1 72.04 ? O10 AZR 301 A 1 HETATM 5 O O11 AZR . . . B 2 33.3 -1.185 2.377 1 74.32 ? O11 AZR 301 A 1 HETATM 6 N N12 AZR . . . B 2 31.355 -0.151 9.461 1 44.74 ? N12 AZR 301 A 1 HETATM 7 N N13 AZR . . . B 2 30.974 -0.61 5.704 1 53.29 ? N13 AZR 301 A 1 HETATM 8 N N14 AZR . . . B 2 32.419 -1.359 3.251 1 57.84 ? N14 AZR 301 A 1 HETATM 9 N N15 AZR . . . B 2 30.235 -0.434 1.102 1 46.75 ? N15 AZR 301 A 1 HETATM 10 N N16 AZR . . . B 2 28.908 0.328 -0.883 1 42.97 ? N16 AZR 301 A 1 HETATM 11 S S17 AZR . . . B 2 31.816 1.196 10.169 1 44.95 ? S17 AZR 301 A 1 HETATM 12 C C18 AZR . . . B 2 31.861 -0.445 8.126 1 49.08 ? C18 AZR 301 A 1 HETATM 13 C C19 AZR . . . B 2 30.728 -0.791 7.141 1 48.28 ? C19 AZR 301 A 1 HETATM 14 C C20 AZR . . . B 2 29.607 0.197 7.393 1 39.29 ? C20 AZR 301 A 1 HETATM 15 C C21 AZR . . . B 2 30.923 -1.6 4.793 1 65.2 ? C21 AZR 301 A 1 HETATM 16 C C22 AZR . . . B 2 31.155 -1.305 3.358 1 56.21 ? C22 AZR 301 A 1 HETATM 17 C C23 AZR . . . B 2 34.676 -1.132 2.842 1 71.7 ? C23 AZR 301 A 1 HETATM 18 C C24 AZR . . . B 2 30.058 -1.011 2.341 1 49.1 ? C24 AZR 301 A 1 HETATM 19 C C25 AZR . . . B 2 28.676 -1.285 2.54 1 45.11 ? C25 AZR 301 A 1 HETATM 20 C C26 AZR . . . B 2 29.063 -0.23 0.428 1 43.01 ? C26 AZR 301 A 1 HETATM 21 C C27 AZR . . . B 2 34.851 -1.865 4.179 1 71.07 ? C27 AZR 301 A 1 HETATM 22 C C28 AZR . . . B 2 35.157 0.312 3.014 1 69.12 ? C28 AZR 301 A 1 HETATM 23 C C29 AZR . . . B 2 35.504 -1.817 1.781 1 71.74 ? C29 AZR 301 A 1 HETATM 24 O O30 AZR . . . B 2 34.981 -2.818 1.275 1 63.18 ? O30 AZR 301 A 1 HETATM 25 O O31 AZR . . . B 2 36.634 -1.386 1.436 1 84.75 ? O31 AZR 301 A 1 HETATM 26 O O32 AZR . . . B 2 33.248 1.282 10.237 1 60.53 ? O32 AZR 301 A 1 HETATM 27 O O33 AZR . . . B 2 31.389 1.468 11.494 1 44.6 ? O33 AZR 301 A 1 HETATM 28 O O34 AZR . . . B 2 31.333 2.303 9.212 1 57.66 ? O34 AZR 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #