data_4X5M
#
_model_server_result.job_id            '_HVW_Ez3JEjKuFzIzTmGvg' 
_model_server_result.datetime_utc      '2024-10-15 11:22:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4x5m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":210}' 
#
_entry.id    4X5M 
#
_exptl.entry_id    4X5M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4X5M 
_cell.length_a            53.68 
_cell.length_b            102.12 
_cell.length_c            58.95 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4X5M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,U 1 1,2 
B,C,H,I,J,K,L,M,N,O,P,Q,R,S,T,V,W 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 107.36 102.12 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 P N N 
? 5 Q N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 341 n n 
C10 C9 OLC doub 342 n n 
C10 C11 OLC sing 343 n n 
C9 C8 OLC sing 344 n n 
C17 C16 OLC sing 345 z n 
C11 C12 OLC sing 346 n n 
C8 C7 OLC sing 347 n n 
C24 C22 OLC sing 348 n n 
C24 O25 OLC sing 349 n n 
C16 C15 OLC sing 350 n n 
C12 C13 OLC sing 351 n n 
C7 C6 OLC sing 352 n n 
C15 C14 OLC sing 353 n n 
C13 C14 OLC sing 354 n n 
C6 C5 OLC sing 355 n n 
C5 C4 OLC sing 356 n n 
C4 C3 OLC sing 357 n n 
C3 C2 OLC sing 358 n n 
C2 C1 OLC sing 359 n n 
C21 C22 OLC sing 360 n n 
C21 O20 OLC sing 361 n n 
C1 O19 OLC doub 362 n n 
C1 O20 OLC sing 363 n n 
C22 O23 OLC sing 364 n n 
C18 H18 OLC sing 365 n n 
C18 H18A OLC sing 366 n n 
C18 H18B OLC sing 367 n n 
C10 H10 OLC sing 368 n n 
C9 H9 OLC sing 369 n n 
C17 H17 OLC sing 370 n n 
C17 H17A OLC sing 371 n n 
C11 H11 OLC sing 372 n n 
C11 H11A OLC sing 373 n n 
C8 H8 OLC sing 374 n n 
C8 H8A OLC sing 375 n n 
C24 H24 OLC sing 376 n n 
C24 H24A OLC sing 377 n n 
C16 H16 OLC sing 378 n n 
C16 H16A OLC sing 379 n n 
C12 H12 OLC sing 380 n n 
C12 H12A OLC sing 381 n n 
C7 H7 OLC sing 382 n n 
C7 H7A OLC sing 383 n n 
C15 H15 OLC sing 384 n n 
C15 H15A OLC sing 385 n n 
C13 H13 OLC sing 386 n n 
C13 H13A OLC sing 387 n n 
C6 H6 OLC sing 388 n n 
C6 H6A OLC sing 389 n n 
C14 H14 OLC sing 390 n n 
C14 H14A OLC sing 391 n n 
C5 H5 OLC sing 392 n n 
C5 H5A OLC sing 393 n n 
C4 H4 OLC sing 394 n n 
C4 H4A OLC sing 395 n n 
C3 H3 OLC sing 396 n n 
C3 H3A OLC sing 397 n n 
C2 H2 OLC sing 398 n n 
C2 H2A OLC sing 399 n n 
C21 H21 OLC sing 400 n n 
C21 H21A OLC sing 401 n n 
C22 H22 OLC sing 402 n n 
O25 HO25 OLC sing 403 n n 
O23 HO23 OLC sing 404 n n 
#
_atom_sites.entry_id                     4X5M 
_atom_sites.fract_transf_matrix[1][1]    0.018629 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009792 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016964 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 OLA A 1 201 1 OLA OLA . 
E 2 OLA A 1 202 2 OLA OLA . 
F 2 OLA A 1 203 12 OLA OLA . 
G 3 OLB A 1 204 4 OLB OLB . 
H 4 SO4 B 1 201 3 SO4 SO4 . 
I 2 OLA B 1 202 5 OLA OLA . 
J 2 OLA B 1 203 6 OLA OLA . 
K 2 OLA B 1 204 7 OLA OLA . 
L 2 OLA B 1 205 9 OLA OLA . 
M 2 OLA B 1 206 10 OLA OLA . 
N 2 OLA B 1 207 11 OLA OLA . 
O 2 OLA B 1 208 13 OLA OLA . 
P 5 OLC B 1 209 1 OLC OLC . 
Q 5 OLC B 1 210 2 OLC OLC . 
R 3 OLB B 1 211 5 OLB OLB . 
S 4 SO4 C 1 201 4 SO4 SO4 . 
T 2 OLA C 1 202 8 OLA OLA . 
U 6 HOH A 1 301 63 HOH HOH . 
U 6 HOH A 2 302 31 HOH HOH . 
U 6 HOH A 3 303 7 HOH HOH . 
U 6 HOH A 4 304 41 HOH HOH . 
U 6 HOH A 5 305 58 HOH HOH . 
U 6 HOH A 6 306 28 HOH HOH . 
U 6 HOH A 7 307 21 HOH HOH . 
U 6 HOH A 8 308 65 HOH HOH . 
U 6 HOH A 9 309 64 HOH HOH . 
U 6 HOH A 10 310 17 HOH HOH . 
U 6 HOH A 11 311 18 HOH HOH . 
U 6 HOH A 12 312 19 HOH HOH . 
U 6 HOH A 13 313 20 HOH HOH . 
U 6 HOH A 14 314 22 HOH HOH . 
U 6 HOH A 15 315 27 HOH HOH . 
U 6 HOH A 16 316 32 HOH HOH . 
U 6 HOH A 17 317 39 HOH HOH . 
U 6 HOH A 18 318 40 HOH HOH . 
U 6 HOH A 19 319 42 HOH HOH . 
U 6 HOH A 20 320 55 HOH HOH . 
U 6 HOH A 21 321 56 HOH HOH . 
U 6 HOH A 22 322 57 HOH HOH . 
U 6 HOH A 23 323 62 HOH HOH . 
V 6 HOH B 1 301 48 HOH HOH . 
V 6 HOH B 2 302 8 HOH HOH . 
V 6 HOH B 3 303 9 HOH HOH . 
V 6 HOH B 4 304 10 HOH HOH . 
V 6 HOH B 5 305 11 HOH HOH . 
V 6 HOH B 6 306 15 HOH HOH . 
V 6 HOH B 7 307 26 HOH HOH . 
V 6 HOH B 8 308 29 HOH HOH . 
V 6 HOH B 9 309 30 HOH HOH . 
V 6 HOH B 10 310 34 HOH HOH . 
V 6 HOH B 11 311 35 HOH HOH . 
V 6 HOH B 12 312 37 HOH HOH . 
V 6 HOH B 13 313 43 HOH HOH . 
V 6 HOH B 14 314 44 HOH HOH . 
V 6 HOH B 15 315 45 HOH HOH . 
V 6 HOH B 16 316 46 HOH HOH . 
V 6 HOH B 17 317 47 HOH HOH . 
V 6 HOH B 18 318 51 HOH HOH . 
V 6 HOH B 19 319 53 HOH HOH . 
V 6 HOH B 20 320 54 HOH HOH . 
V 6 HOH B 21 321 59 HOH HOH . 
V 6 HOH B 22 322 60 HOH HOH . 
V 6 HOH B 23 323 61 HOH HOH . 
W 6 HOH C 1 301 23 HOH HOH . 
W 6 HOH C 2 302 66 HOH HOH . 
W 6 HOH C 3 303 6 HOH HOH . 
W 6 HOH C 4 304 13 HOH HOH . 
W 6 HOH C 5 305 1 HOH HOH . 
W 6 HOH C 6 306 2 HOH HOH . 
W 6 HOH C 7 307 3 HOH HOH . 
W 6 HOH C 8 308 4 HOH HOH . 
W 6 HOH C 9 309 5 HOH HOH . 
W 6 HOH C 10 310 12 HOH HOH . 
W 6 HOH C 11 311 14 HOH HOH . 
W 6 HOH C 12 312 16 HOH HOH . 
W 6 HOH C 13 313 24 HOH HOH . 
W 6 HOH C 14 314 25 HOH HOH . 
W 6 HOH C 15 315 33 HOH HOH . 
W 6 HOH C 16 316 36 HOH HOH . 
W 6 HOH C 17 317 38 HOH HOH . 
W 6 HOH C 18 318 49 HOH HOH . 
W 6 HOH C 19 319 50 HOH HOH . 
W 6 HOH C 20 320 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 OLC . . . Q 5 46.612 12.88 -33.006 1 55.37 ? C9 OLC 210 B 1 
HETATM 2 C C8 OLC . . . Q 5 46.922 13.793 -34.172 1 52.61 ? C8 OLC 210 B 1 
HETATM 3 C C24 OLC . . . Q 5 41.48 12.942 -45.148 1 62.84 ? C24 OLC 210 B 1 
HETATM 4 C C7 OLC . . . Q 5 45.629 14.248 -34.814 1 53.15 ? C7 OLC 210 B 1 
HETATM 5 C C6 OLC . . . Q 5 45.739 14.146 -36.32 1 57.37 ? C6 OLC 210 B 1 
HETATM 6 C C5 OLC . . . Q 5 45.944 12.701 -36.718 1 56.38 ? C5 OLC 210 B 1 
HETATM 7 C C4 OLC . . . Q 5 45.812 12.563 -38.219 1 49.73 ? C4 OLC 210 B 1 
HETATM 8 C C3 OLC . . . Q 5 44.363 12.74 -38.618 1 59.15 ? C3 OLC 210 B 1 
HETATM 9 C C2 OLC . . . Q 5 44.295 13.641 -39.831 1 62.06 ? C2 OLC 210 B 1 
HETATM 10 C C21 OLC . . . Q 5 43.107 12.753 -43.294 1 63.69 ? C21 OLC 210 B 1 
HETATM 11 C C1 OLC . . . Q 5 43.743 12.883 -41.019 1 66.06 ? C1 OLC 210 B 1 
HETATM 12 C C22 OLC . . . Q 5 42.274 13.709 -44.115 1 62.33 ? C22 OLC 210 B 1 
HETATM 13 O O19 OLC . . . Q 5 43.294 11.763 -40.878 1 77.9 ? O19 OLC 210 B 1 
HETATM 14 O O25 OLC . . . Q 5 42.367 12.254 -46 1 64.53 ? O25 OLC 210 B 1 
HETATM 15 O O23 OLC . . . Q 5 41.393 14.394 -43.258 1 68.5 ? O23 OLC 210 B 1 
HETATM 16 O O20 OLC . . . Q 5 43.751 13.492 -42.285 1 60.77 ? O20 OLC 210 B 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#