data_4X5M # _model_server_result.job_id T_YTdNM4PBUVjy0t-TcesA _model_server_result.datetime_utc '2024-10-15 11:27:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":211}' # _entry.id 4X5M # _exptl.entry_id 4X5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X5M _cell.length_a 53.68 _cell.length_b 102.12 _cell.length_c 58.95 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,U 1 1,2 B,C,H,I,J,K,L,M,N,O,P,Q,R,S,T,V,W 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 107.36 102.12 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 R N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLB _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O19 OLB doub 277 n n C1 O20 OLB sing 278 n n C2 C1 OLB sing 279 n n C3 C2 OLB sing 280 n n C4 C3 OLB sing 281 n n C5 C4 OLB sing 282 n n C5 C6 OLB sing 283 n n O20 C21 OLB sing 284 n n C21 C22 OLB sing 285 n n C22 C24 OLB sing 286 n n O23 C22 OLB sing 287 n n C24 O25 OLB sing 288 n n C6 C7 OLB sing 289 n n C7 C8 OLB sing 290 n n C8 C9 OLB sing 291 n n C9 C10 OLB doub 292 z n C10 C11 OLB sing 293 n n C2 H2 OLB sing 294 n n C2 H2A OLB sing 295 n n C3 H3 OLB sing 296 n n C3 H3A OLB sing 297 n n C4 H4 OLB sing 298 n n C4 H4A OLB sing 299 n n C5 H5 OLB sing 300 n n C5 H5A OLB sing 301 n n C21 H21 OLB sing 302 n n C21 H21A OLB sing 303 n n C22 H22 OLB sing 304 n n O23 HO23 OLB sing 305 n n C24 H24 OLB sing 306 n n C24 H24A OLB sing 307 n n O25 HO25 OLB sing 308 n n C6 H16 OLB sing 309 n n C6 H17 OLB sing 310 n n C7 H18 OLB sing 311 n n C7 H19 OLB sing 312 n n C8 H20 OLB sing 313 n n C8 H211 OLB sing 314 n n C9 H221 OLB sing 315 n n C10 H23 OLB sing 316 n n C11 H241 OLB sing 317 n n C11 H25 OLB sing 318 n n C11 C12 OLB sing 319 n n C12 H26 OLB sing 320 n n C12 C13 OLB sing 321 n n C12 H27 OLB sing 322 n n C13 C14 OLB sing 323 n n C13 H28 OLB sing 324 n n C13 H29 OLB sing 325 n n C14 H30 OLB sing 326 n n C14 H31 OLB sing 327 n n C14 C15 OLB sing 328 n n C15 C16 OLB sing 329 n n C15 H32 OLB sing 330 n n C15 H33 OLB sing 331 n n C16 H34 OLB sing 332 n n C16 H35 OLB sing 333 n n C16 C17 OLB sing 334 n n C17 C18 OLB sing 335 n n C17 H36 OLB sing 336 n n C17 H37 OLB sing 337 n n C18 H38 OLB sing 338 n n C18 H39 OLB sing 339 n n C18 H40 OLB sing 340 n n # _atom_sites.entry_id 4X5M _atom_sites.fract_transf_matrix[1][1] 0.018629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009792 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 OLA A 1 201 1 OLA OLA . E 2 OLA A 1 202 2 OLA OLA . F 2 OLA A 1 203 12 OLA OLA . G 3 OLB A 1 204 4 OLB OLB . H 4 SO4 B 1 201 3 SO4 SO4 . I 2 OLA B 1 202 5 OLA OLA . J 2 OLA B 1 203 6 OLA OLA . K 2 OLA B 1 204 7 OLA OLA . L 2 OLA B 1 205 9 OLA OLA . M 2 OLA B 1 206 10 OLA OLA . N 2 OLA B 1 207 11 OLA OLA . O 2 OLA B 1 208 13 OLA OLA . P 5 OLC B 1 209 1 OLC OLC . Q 5 OLC B 1 210 2 OLC OLC . R 3 OLB B 1 211 5 OLB OLB . S 4 SO4 C 1 201 4 SO4 SO4 . T 2 OLA C 1 202 8 OLA OLA . U 6 HOH A 1 301 63 HOH HOH . U 6 HOH A 2 302 31 HOH HOH . U 6 HOH A 3 303 7 HOH HOH . U 6 HOH A 4 304 41 HOH HOH . U 6 HOH A 5 305 58 HOH HOH . U 6 HOH A 6 306 28 HOH HOH . U 6 HOH A 7 307 21 HOH HOH . U 6 HOH A 8 308 65 HOH HOH . U 6 HOH A 9 309 64 HOH HOH . U 6 HOH A 10 310 17 HOH HOH . U 6 HOH A 11 311 18 HOH HOH . U 6 HOH A 12 312 19 HOH HOH . U 6 HOH A 13 313 20 HOH HOH . U 6 HOH A 14 314 22 HOH HOH . U 6 HOH A 15 315 27 HOH HOH . U 6 HOH A 16 316 32 HOH HOH . U 6 HOH A 17 317 39 HOH HOH . U 6 HOH A 18 318 40 HOH HOH . U 6 HOH A 19 319 42 HOH HOH . U 6 HOH A 20 320 55 HOH HOH . U 6 HOH A 21 321 56 HOH HOH . U 6 HOH A 22 322 57 HOH HOH . U 6 HOH A 23 323 62 HOH HOH . V 6 HOH B 1 301 48 HOH HOH . V 6 HOH B 2 302 8 HOH HOH . V 6 HOH B 3 303 9 HOH HOH . V 6 HOH B 4 304 10 HOH HOH . V 6 HOH B 5 305 11 HOH HOH . V 6 HOH B 6 306 15 HOH HOH . V 6 HOH B 7 307 26 HOH HOH . V 6 HOH B 8 308 29 HOH HOH . V 6 HOH B 9 309 30 HOH HOH . V 6 HOH B 10 310 34 HOH HOH . V 6 HOH B 11 311 35 HOH HOH . V 6 HOH B 12 312 37 HOH HOH . V 6 HOH B 13 313 43 HOH HOH . V 6 HOH B 14 314 44 HOH HOH . V 6 HOH B 15 315 45 HOH HOH . V 6 HOH B 16 316 46 HOH HOH . V 6 HOH B 17 317 47 HOH HOH . V 6 HOH B 18 318 51 HOH HOH . V 6 HOH B 19 319 53 HOH HOH . V 6 HOH B 20 320 54 HOH HOH . V 6 HOH B 21 321 59 HOH HOH . V 6 HOH B 22 322 60 HOH HOH . V 6 HOH B 23 323 61 HOH HOH . W 6 HOH C 1 301 23 HOH HOH . W 6 HOH C 2 302 66 HOH HOH . W 6 HOH C 3 303 6 HOH HOH . W 6 HOH C 4 304 13 HOH HOH . W 6 HOH C 5 305 1 HOH HOH . W 6 HOH C 6 306 2 HOH HOH . W 6 HOH C 7 307 3 HOH HOH . W 6 HOH C 8 308 4 HOH HOH . W 6 HOH C 9 309 5 HOH HOH . W 6 HOH C 10 310 12 HOH HOH . W 6 HOH C 11 311 14 HOH HOH . W 6 HOH C 12 312 16 HOH HOH . W 6 HOH C 13 313 24 HOH HOH . W 6 HOH C 14 314 25 HOH HOH . W 6 HOH C 15 315 33 HOH HOH . W 6 HOH C 16 316 36 HOH HOH . W 6 HOH C 17 317 38 HOH HOH . W 6 HOH C 18 318 49 HOH HOH . W 6 HOH C 19 319 50 HOH HOH . W 6 HOH C 20 320 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLB . . . R 3 49.949 26.288 -15.442 1 70.99 ? C1 OLB 211 B 1 HETATM 2 C C2 OLB . . . R 3 48.943 27.056 -16.267 1 61.33 ? C2 OLB 211 B 1 HETATM 3 C C3 OLB . . . R 3 49.381 27.094 -17.714 1 57.35 ? C3 OLB 211 B 1 HETATM 4 C C4 OLB . . . R 3 48.208 27.403 -18.62 1 51.44 ? C4 OLB 211 B 1 HETATM 5 C C5 OLB . . . R 3 48.76 27.886 -19.941 1 56.88 ? C5 OLB 211 B 1 HETATM 6 O O19 OLB . . . R 3 50.308 25.193 -15.82 1 69.66 ? O19 OLB 211 B 1 HETATM 7 O O20 OLB . . . R 3 50.424 26.823 -14.238 1 70.74 ? O20 OLB 211 B 1 HETATM 8 C C21 OLB . . . R 3 49.477 26.689 -13.216 1 74 ? C21 OLB 211 B 1 HETATM 9 C C22 OLB . . . R 3 50.191 26.914 -11.904 1 73.27 ? C22 OLB 211 B 1 HETATM 10 O O23 OLB . . . R 3 50.653 25.667 -11.444 1 68.04 ? O23 OLB 211 B 1 HETATM 11 C C24 OLB . . . R 3 51.363 27.879 -12.039 1 74.31 ? C24 OLB 211 B 1 HETATM 12 O O25 OLB . . . R 3 52.02 28.015 -10.783 1 72.16 ? O25 OLB 211 B 1 HETATM 13 C C6 OLB . . . R 3 47.614 28.244 -20.856 1 48.02 ? C6 OLB 211 B 1 HETATM 14 C C7 OLB . . . R 3 47.967 27.815 -22.26 1 45.97 ? C7 OLB 211 B 1 HETATM 15 C C8 OLB . . . R 3 49.269 28.47 -22.665 1 52.71 ? C8 OLB 211 B 1 HETATM 16 C C9 OLB . . . R 3 48.968 29.708 -23.482 1 54.82 ? C9 OLB 211 B 1 HETATM 17 C C10 OLB . . . R 3 49.683 30.006 -24.589 1 51.15 ? C10 OLB 211 B 1 HETATM 18 C C11 OLB . . . R 3 50.817 29.119 -25.065 1 51.16 ? C11 OLB 211 B 1 HETATM 19 C C12 OLB . . . R 3 50.293 28.111 -26.066 1 56.03 ? C12 OLB 211 B 1 HETATM 20 C C13 OLB . . . R 3 51.162 28.122 -27.304 1 44.19 ? C13 OLB 211 B 1 HETATM 21 C C14 OLB . . . R 3 50.58 27.179 -28.333 1 41.16 ? C14 OLB 211 B 1 HETATM 22 C C15 OLB . . . R 3 51.622 26.156 -28.728 1 36.38 ? C15 OLB 211 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #