data_4X60 # _model_server_result.job_id wRzttfCSbAAu-abwSdaaSg _model_server_result.datetime_utc '2024-11-22 13:33:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 4X60 # _exptl.entry_id 4X60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.444 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2S)-3-(3,4-dihydroisoquinolin-2(1H)-yl)-2-hydroxypropyl]-6-(oxetan-3-ylamino)pyrimidine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X60 _cell.length_a 103.67 _cell.length_b 137.96 _cell.length_c 179.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H25 N5 O3' _chem_comp.formula_weight 383.444 _chem_comp.id 3XV _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2S)-3-(3,4-dihydroisoquinolin-2(1H)-yl)-2-hydroxypropyl]-6-(oxetan-3-ylamino)pyrimidine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF CAE 3XV doub 1 n n CAN CAK 3XV sing 2 n n CAN OAM 3XV sing 3 n n C5 C6 3XV doub 4 n y C5 C4 3XV sing 5 n y NAJ C6 3XV sing 6 n n NAJ CAK 3XV sing 7 n n CAE C4 3XV sing 8 n n CAE NAD 3XV sing 9 n n C6 N1 3XV sing 10 n y C4 N3 3XV doub 11 n y CAK CAL 3XV sing 12 n n CAC NAD 3XV sing 13 n n CAC CAB 3XV sing 14 n n OAA CAB 3XV sing 15 n n CAT CAU 3XV sing 16 n n CAT NAS 3XV sing 17 n n CAR CAB 3XV sing 18 n n CAR NAS 3XV sing 19 n n OAM CAL 3XV sing 20 n n CAU CAV 3XV sing 21 n n N1 C2 3XV doub 22 n y N3 C2 3XV sing 23 n y NAS CAX 3XV sing 24 n n CAV CBB 3XV doub 25 n y CAV CAW 3XV sing 26 n y CAX CAW 3XV sing 27 n n CBB CBA 3XV sing 28 n y CAW CAY 3XV doub 29 n y CBA CAZ 3XV doub 30 n y CAY CAZ 3XV sing 31 n y C2 H1 3XV sing 32 n n C5 H2 3XV sing 33 n n CAT H3 3XV sing 34 n n CAT H4 3XV sing 35 n n CAU H5 3XV sing 36 n n CAU H6 3XV sing 37 n n CBB H7 3XV sing 38 n n CBA H8 3XV sing 39 n n CAZ H9 3XV sing 40 n n CAY H10 3XV sing 41 n n CAX H11 3XV sing 42 n n CAX H12 3XV sing 43 n n CAR H14 3XV sing 44 n n CAR H15 3XV sing 45 n n CAB H16 3XV sing 46 n n OAA H17 3XV sing 47 n n CAC H18 3XV sing 48 n n CAC H19 3XV sing 49 n n NAD H20 3XV sing 50 n n NAJ H21 3XV sing 51 n n CAK H22 3XV sing 52 n n CAL H23 3XV sing 53 n n CAL H24 3XV sing 54 n n CAN H25 3XV sing 55 n n CAN H26 3XV sing 56 n n # _atom_sites.entry_id 4X60 _atom_sites.fract_transf_matrix[1][1] 0.009646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007248 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SFG A 1 701 1 SFG SFG . D 4 3XV A 1 702 1 3XV EPZ . E 5 GOL A 1 703 1 GOL GOL . F 5 GOL A 1 704 2 GOL GOL . G 5 GOL A 1 705 3 GOL GOL . H 6 HOH A 1 801 137 HOH HOH . H 6 HOH A 2 802 37 HOH HOH . H 6 HOH A 3 803 81 HOH HOH . H 6 HOH A 4 804 61 HOH HOH . H 6 HOH A 5 805 14 HOH HOH . H 6 HOH A 6 806 9 HOH HOH . H 6 HOH A 7 807 36 HOH HOH . H 6 HOH A 8 808 32 HOH HOH . H 6 HOH A 9 809 33 HOH HOH . H 6 HOH A 10 810 129 HOH HOH . H 6 HOH A 11 811 45 HOH HOH . H 6 HOH A 12 812 128 HOH HOH . H 6 HOH A 13 813 87 HOH HOH . H 6 HOH A 14 814 82 HOH HOH . H 6 HOH A 15 815 76 HOH HOH . H 6 HOH A 16 816 70 HOH HOH . H 6 HOH A 17 817 1 HOH HOH . H 6 HOH A 18 818 2 HOH HOH . H 6 HOH A 19 819 3 HOH HOH . H 6 HOH A 20 820 4 HOH HOH . H 6 HOH A 21 821 5 HOH HOH . H 6 HOH A 22 822 6 HOH HOH . H 6 HOH A 23 823 8 HOH HOH . H 6 HOH A 24 824 10 HOH HOH . H 6 HOH A 25 825 11 HOH HOH . H 6 HOH A 26 826 12 HOH HOH . H 6 HOH A 27 827 13 HOH HOH . H 6 HOH A 28 828 15 HOH HOH . H 6 HOH A 29 829 16 HOH HOH . H 6 HOH A 30 830 17 HOH HOH . H 6 HOH A 31 831 20 HOH HOH . H 6 HOH A 32 832 21 HOH HOH . H 6 HOH A 33 833 22 HOH HOH . H 6 HOH A 34 834 23 HOH HOH . H 6 HOH A 35 835 24 HOH HOH . H 6 HOH A 36 836 26 HOH HOH . H 6 HOH A 37 837 27 HOH HOH . H 6 HOH A 38 838 28 HOH HOH . H 6 HOH A 39 839 29 HOH HOH . H 6 HOH A 40 840 30 HOH HOH . H 6 HOH A 41 841 31 HOH HOH . H 6 HOH A 42 842 34 HOH HOH . H 6 HOH A 43 843 35 HOH HOH . H 6 HOH A 44 844 38 HOH HOH . H 6 HOH A 45 845 39 HOH HOH . H 6 HOH A 46 846 40 HOH HOH . H 6 HOH A 47 847 42 HOH HOH . H 6 HOH A 48 848 44 HOH HOH . H 6 HOH A 49 849 46 HOH HOH . H 6 HOH A 50 850 49 HOH HOH . H 6 HOH A 51 851 50 HOH HOH . H 6 HOH A 52 852 51 HOH HOH . H 6 HOH A 53 853 52 HOH HOH . H 6 HOH A 54 854 54 HOH HOH . H 6 HOH A 55 855 57 HOH HOH . H 6 HOH A 56 856 58 HOH HOH . H 6 HOH A 57 857 59 HOH HOH . H 6 HOH A 58 858 60 HOH HOH . H 6 HOH A 59 859 63 HOH HOH . H 6 HOH A 60 860 64 HOH HOH . H 6 HOH A 61 861 65 HOH HOH . H 6 HOH A 62 862 66 HOH HOH . H 6 HOH A 63 863 68 HOH HOH . H 6 HOH A 64 864 69 HOH HOH . H 6 HOH A 65 865 71 HOH HOH . H 6 HOH A 66 866 72 HOH HOH . H 6 HOH A 67 867 73 HOH HOH . H 6 HOH A 68 868 74 HOH HOH . H 6 HOH A 69 869 75 HOH HOH . H 6 HOH A 70 870 77 HOH HOH . H 6 HOH A 71 871 78 HOH HOH . H 6 HOH A 72 872 79 HOH HOH . H 6 HOH A 73 873 80 HOH HOH . H 6 HOH A 74 874 83 HOH HOH . H 6 HOH A 75 875 84 HOH HOH . H 6 HOH A 76 876 85 HOH HOH . H 6 HOH A 77 877 86 HOH HOH . H 6 HOH A 78 878 88 HOH HOH . H 6 HOH A 79 879 89 HOH HOH . H 6 HOH A 80 880 90 HOH HOH . H 6 HOH A 81 881 91 HOH HOH . H 6 HOH A 82 882 92 HOH HOH . H 6 HOH A 83 883 93 HOH HOH . H 6 HOH A 84 884 94 HOH HOH . H 6 HOH A 85 885 107 HOH HOH . H 6 HOH A 86 886 108 HOH HOH . H 6 HOH A 87 887 110 HOH HOH . H 6 HOH A 88 888 111 HOH HOH . H 6 HOH A 89 889 112 HOH HOH . H 6 HOH A 90 890 113 HOH HOH . H 6 HOH A 91 891 114 HOH HOH . H 6 HOH A 92 892 115 HOH HOH . H 6 HOH A 93 893 116 HOH HOH . H 6 HOH A 94 894 117 HOH HOH . H 6 HOH A 95 895 118 HOH HOH . H 6 HOH A 96 896 119 HOH HOH . H 6 HOH A 97 897 120 HOH HOH . H 6 HOH A 98 898 121 HOH HOH . H 6 HOH A 99 899 122 HOH HOH . H 6 HOH A 100 900 123 HOH HOH . H 6 HOH A 101 901 124 HOH HOH . H 6 HOH A 102 902 125 HOH HOH . H 6 HOH A 103 903 126 HOH HOH . H 6 HOH A 104 904 127 HOH HOH . H 6 HOH A 105 905 130 HOH HOH . H 6 HOH A 106 906 131 HOH HOH . H 6 HOH A 107 907 132 HOH HOH . H 6 HOH A 108 908 133 HOH HOH . H 6 HOH A 109 909 135 HOH HOH . H 6 HOH A 110 910 136 HOH HOH . H 6 HOH A 111 911 140 HOH HOH . I 6 HOH B 1 401 48 HOH HOH . I 6 HOH B 2 402 25 HOH HOH . I 6 HOH B 3 403 7 HOH HOH . I 6 HOH B 4 404 18 HOH HOH . I 6 HOH B 5 405 41 HOH HOH . I 6 HOH B 6 406 43 HOH HOH . I 6 HOH B 7 407 47 HOH HOH . I 6 HOH B 8 408 53 HOH HOH . I 6 HOH B 9 409 55 HOH HOH . I 6 HOH B 10 410 56 HOH HOH . I 6 HOH B 11 411 62 HOH HOH . I 6 HOH B 12 412 67 HOH HOH . I 6 HOH B 13 413 95 HOH HOH . I 6 HOH B 14 414 97 HOH HOH . I 6 HOH B 15 415 98 HOH HOH . I 6 HOH B 16 416 99 HOH HOH . I 6 HOH B 17 417 100 HOH HOH . I 6 HOH B 18 418 101 HOH HOH . I 6 HOH B 19 419 102 HOH HOH . I 6 HOH B 20 420 103 HOH HOH . I 6 HOH B 21 421 104 HOH HOH . I 6 HOH B 22 422 105 HOH HOH . I 6 HOH B 23 423 106 HOH HOH . I 6 HOH B 24 424 109 HOH HOH . I 6 HOH B 25 425 134 HOH HOH . I 6 HOH B 26 426 138 HOH HOH . I 6 HOH B 27 427 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 3XV . . . D 4 22.698 -51.88 -9.538 1 43.22 ? C2 3XV 702 A 1 HETATM 2 C C4 3XV . . . D 4 21.969 -50.219 -11.096 1 45.53 ? C4 3XV 702 A 1 HETATM 3 C C5 3XV . . . D 4 23.255 -50.178 -11.664 1 43.44 ? C5 3XV 702 A 1 HETATM 4 C C6 3XV . . . D 4 24.258 -51.013 -11.141 1 46.72 ? C6 3XV 702 A 1 HETATM 5 C CAT 3XV . . . D 4 22.694 -44.541 -10.649 1 44.98 ? CAT 3XV 702 A 1 HETATM 6 C CAU 3XV . . . D 4 23.182 -43.214 -10.155 1 45.19 ? CAU 3XV 702 A 1 HETATM 7 C CAV 3XV . . . D 4 23.095 -43.137 -8.755 1 49.5 ? CAV 3XV 702 A 1 HETATM 8 C CBB 3XV . . . D 4 23.872 -42.172 -8.096 1 47.63 ? CBB 3XV 702 A 1 HETATM 9 C CBA 3XV . . . D 4 23.828 -42.055 -6.706 1 46.32 ? CBA 3XV 702 A 1 HETATM 10 C CAZ 3XV . . . D 4 23.006 -42.892 -5.957 1 44.74 ? CAZ 3XV 702 A 1 HETATM 11 C CAY 3XV . . . D 4 22.224 -43.849 -6.596 1 47.44 ? CAY 3XV 702 A 1 HETATM 12 C CAW 3XV . . . D 4 22.259 -43.985 -7.994 1 49.18 ? CAW 3XV 702 A 1 HETATM 13 C CAX 3XV . . . D 4 21.454 -44.973 -8.573 1 43.54 ? CAX 3XV 702 A 1 HETATM 14 N NAS 3XV . . . D 4 21.395 -44.89 -10.042 1 46.22 ? NAS 3XV 702 A 1 HETATM 15 C CAR 3XV . . . D 4 21.011 -46.203 -10.567 1 42.71 ? CAR 3XV 702 A 1 HETATM 16 C CAB 3XV . . . D 4 19.525 -46.489 -10.317 1 43.89 ? CAB 3XV 702 A 1 HETATM 17 O OAA 3XV . . . D 4 18.752 -45.413 -10.863 1 45.56 ? OAA 3XV 702 A 1 HETATM 18 C CAC 3XV . . . D 4 19.122 -47.845 -10.948 1 42.47 ? CAC 3XV 702 A 1 HETATM 19 N NAD 3XV . . . D 4 20.171 -48.826 -10.635 1 40.13 ? NAD 3XV 702 A 1 HETATM 20 C CAE 3XV . . . D 4 20.951 -49.382 -11.584 1 45.36 ? CAE 3XV 702 A 1 HETATM 21 O OAF 3XV . . . D 4 20.813 -49.164 -12.795 1 47.85 ? OAF 3XV 702 A 1 HETATM 22 N N3 3XV . . . D 4 21.709 -51.045 -10.055 1 44.61 ? N3 3XV 702 A 1 HETATM 23 N N1 3XV . . . D 4 23.976 -51.839 -10.105 1 44.33 ? N1 3XV 702 A 1 HETATM 24 N NAJ 3XV . . . D 4 25.503 -51.006 -11.655 1 46.39 ? NAJ 3XV 702 A 1 HETATM 25 C CAK 3XV . . . D 4 26.607 -51.787 -11.051 1 51.65 ? CAK 3XV 702 A 1 HETATM 26 C CAL 3XV . . . D 4 27.271 -51.039 -9.903 1 50.37 ? CAL 3XV 702 A 1 HETATM 27 O OAM 3XV . . . D 4 28.557 -51.346 -10.525 1 53.19 ? OAM 3XV 702 A 1 HETATM 28 C CAN 3XV . . . D 4 27.909 -51.575 -11.811 1 51.24 ? CAN 3XV 702 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #