data_4X60 # _model_server_result.job_id cPskh0LXmXNrsgZlNclkbg _model_server_result.datetime_utc '2024-11-22 13:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4x60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 4X60 # _exptl.entry_id 4X60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4X60 _cell.length_a 103.67 _cell.length_b 137.96 _cell.length_c 179.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 185 n n C1 C2 GOL sing 186 n n C1 H11 GOL sing 187 n n C1 H12 GOL sing 188 n n O1 HO1 GOL sing 189 n n C2 O2 GOL sing 190 n n C2 C3 GOL sing 191 n n C2 H2 GOL sing 192 n n O2 HO2 GOL sing 193 n n C3 O3 GOL sing 194 n n C3 H31 GOL sing 195 n n C3 H32 GOL sing 196 n n O3 HO3 GOL sing 197 n n # _atom_sites.entry_id 4X60 _atom_sites.fract_transf_matrix[1][1] 0.009646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007248 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SFG A 1 701 1 SFG SFG . D 4 3XV A 1 702 1 3XV EPZ . E 5 GOL A 1 703 1 GOL GOL . F 5 GOL A 1 704 2 GOL GOL . G 5 GOL A 1 705 3 GOL GOL . H 6 HOH A 1 801 137 HOH HOH . H 6 HOH A 2 802 37 HOH HOH . H 6 HOH A 3 803 81 HOH HOH . H 6 HOH A 4 804 61 HOH HOH . H 6 HOH A 5 805 14 HOH HOH . H 6 HOH A 6 806 9 HOH HOH . H 6 HOH A 7 807 36 HOH HOH . H 6 HOH A 8 808 32 HOH HOH . H 6 HOH A 9 809 33 HOH HOH . H 6 HOH A 10 810 129 HOH HOH . H 6 HOH A 11 811 45 HOH HOH . H 6 HOH A 12 812 128 HOH HOH . H 6 HOH A 13 813 87 HOH HOH . H 6 HOH A 14 814 82 HOH HOH . H 6 HOH A 15 815 76 HOH HOH . H 6 HOH A 16 816 70 HOH HOH . H 6 HOH A 17 817 1 HOH HOH . H 6 HOH A 18 818 2 HOH HOH . H 6 HOH A 19 819 3 HOH HOH . H 6 HOH A 20 820 4 HOH HOH . H 6 HOH A 21 821 5 HOH HOH . H 6 HOH A 22 822 6 HOH HOH . H 6 HOH A 23 823 8 HOH HOH . H 6 HOH A 24 824 10 HOH HOH . H 6 HOH A 25 825 11 HOH HOH . H 6 HOH A 26 826 12 HOH HOH . H 6 HOH A 27 827 13 HOH HOH . H 6 HOH A 28 828 15 HOH HOH . H 6 HOH A 29 829 16 HOH HOH . H 6 HOH A 30 830 17 HOH HOH . H 6 HOH A 31 831 20 HOH HOH . H 6 HOH A 32 832 21 HOH HOH . H 6 HOH A 33 833 22 HOH HOH . H 6 HOH A 34 834 23 HOH HOH . H 6 HOH A 35 835 24 HOH HOH . H 6 HOH A 36 836 26 HOH HOH . H 6 HOH A 37 837 27 HOH HOH . H 6 HOH A 38 838 28 HOH HOH . H 6 HOH A 39 839 29 HOH HOH . H 6 HOH A 40 840 30 HOH HOH . H 6 HOH A 41 841 31 HOH HOH . H 6 HOH A 42 842 34 HOH HOH . H 6 HOH A 43 843 35 HOH HOH . H 6 HOH A 44 844 38 HOH HOH . H 6 HOH A 45 845 39 HOH HOH . H 6 HOH A 46 846 40 HOH HOH . H 6 HOH A 47 847 42 HOH HOH . H 6 HOH A 48 848 44 HOH HOH . H 6 HOH A 49 849 46 HOH HOH . H 6 HOH A 50 850 49 HOH HOH . H 6 HOH A 51 851 50 HOH HOH . H 6 HOH A 52 852 51 HOH HOH . H 6 HOH A 53 853 52 HOH HOH . H 6 HOH A 54 854 54 HOH HOH . H 6 HOH A 55 855 57 HOH HOH . H 6 HOH A 56 856 58 HOH HOH . H 6 HOH A 57 857 59 HOH HOH . H 6 HOH A 58 858 60 HOH HOH . H 6 HOH A 59 859 63 HOH HOH . H 6 HOH A 60 860 64 HOH HOH . H 6 HOH A 61 861 65 HOH HOH . H 6 HOH A 62 862 66 HOH HOH . H 6 HOH A 63 863 68 HOH HOH . H 6 HOH A 64 864 69 HOH HOH . H 6 HOH A 65 865 71 HOH HOH . H 6 HOH A 66 866 72 HOH HOH . H 6 HOH A 67 867 73 HOH HOH . H 6 HOH A 68 868 74 HOH HOH . H 6 HOH A 69 869 75 HOH HOH . H 6 HOH A 70 870 77 HOH HOH . H 6 HOH A 71 871 78 HOH HOH . H 6 HOH A 72 872 79 HOH HOH . H 6 HOH A 73 873 80 HOH HOH . H 6 HOH A 74 874 83 HOH HOH . H 6 HOH A 75 875 84 HOH HOH . H 6 HOH A 76 876 85 HOH HOH . H 6 HOH A 77 877 86 HOH HOH . H 6 HOH A 78 878 88 HOH HOH . H 6 HOH A 79 879 89 HOH HOH . H 6 HOH A 80 880 90 HOH HOH . H 6 HOH A 81 881 91 HOH HOH . H 6 HOH A 82 882 92 HOH HOH . H 6 HOH A 83 883 93 HOH HOH . H 6 HOH A 84 884 94 HOH HOH . H 6 HOH A 85 885 107 HOH HOH . H 6 HOH A 86 886 108 HOH HOH . H 6 HOH A 87 887 110 HOH HOH . H 6 HOH A 88 888 111 HOH HOH . H 6 HOH A 89 889 112 HOH HOH . H 6 HOH A 90 890 113 HOH HOH . H 6 HOH A 91 891 114 HOH HOH . H 6 HOH A 92 892 115 HOH HOH . H 6 HOH A 93 893 116 HOH HOH . H 6 HOH A 94 894 117 HOH HOH . H 6 HOH A 95 895 118 HOH HOH . H 6 HOH A 96 896 119 HOH HOH . H 6 HOH A 97 897 120 HOH HOH . H 6 HOH A 98 898 121 HOH HOH . H 6 HOH A 99 899 122 HOH HOH . H 6 HOH A 100 900 123 HOH HOH . H 6 HOH A 101 901 124 HOH HOH . H 6 HOH A 102 902 125 HOH HOH . H 6 HOH A 103 903 126 HOH HOH . H 6 HOH A 104 904 127 HOH HOH . H 6 HOH A 105 905 130 HOH HOH . H 6 HOH A 106 906 131 HOH HOH . H 6 HOH A 107 907 132 HOH HOH . H 6 HOH A 108 908 133 HOH HOH . H 6 HOH A 109 909 135 HOH HOH . H 6 HOH A 110 910 136 HOH HOH . H 6 HOH A 111 911 140 HOH HOH . I 6 HOH B 1 401 48 HOH HOH . I 6 HOH B 2 402 25 HOH HOH . I 6 HOH B 3 403 7 HOH HOH . I 6 HOH B 4 404 18 HOH HOH . I 6 HOH B 5 405 41 HOH HOH . I 6 HOH B 6 406 43 HOH HOH . I 6 HOH B 7 407 47 HOH HOH . I 6 HOH B 8 408 53 HOH HOH . I 6 HOH B 9 409 55 HOH HOH . I 6 HOH B 10 410 56 HOH HOH . I 6 HOH B 11 411 62 HOH HOH . I 6 HOH B 12 412 67 HOH HOH . I 6 HOH B 13 413 95 HOH HOH . I 6 HOH B 14 414 97 HOH HOH . I 6 HOH B 15 415 98 HOH HOH . I 6 HOH B 16 416 99 HOH HOH . I 6 HOH B 17 417 100 HOH HOH . I 6 HOH B 18 418 101 HOH HOH . I 6 HOH B 19 419 102 HOH HOH . I 6 HOH B 20 420 103 HOH HOH . I 6 HOH B 21 421 104 HOH HOH . I 6 HOH B 22 422 105 HOH HOH . I 6 HOH B 23 423 106 HOH HOH . I 6 HOH B 24 424 109 HOH HOH . I 6 HOH B 25 425 134 HOH HOH . I 6 HOH B 26 426 138 HOH HOH . I 6 HOH B 27 427 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 31.159 -79.783 -14.919 1 68.36 ? C1 GOL 703 A 1 HETATM 2 O O1 GOL . . . E 5 29.799 -79.5 -14.6 1 66.29 ? O1 GOL 703 A 1 HETATM 3 C C2 GOL . . . E 5 32.008 -78.979 -13.947 1 72.13 ? C2 GOL 703 A 1 HETATM 4 O O2 GOL . . . E 5 31.963 -79.655 -12.684 1 71.99 ? O2 GOL 703 A 1 HETATM 5 C C3 GOL . . . E 5 33.436 -78.835 -14.489 1 74.56 ? C3 GOL 703 A 1 HETATM 6 O O3 GOL . . . E 5 34.441 -79.297 -13.572 1 76.52 ? O3 GOL 703 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #